ggKbase home page

solids_Gemmatimonadetes_1

SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_1

Consensus taxonomy: Gemmatimonadetes  →  Bacteria

Displaying items 1-50 of 623 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_solids1_trim150_scaffold_894_curated
Domain: Bacteria (96.3%)
27 29115 bp 64.99 1.00 89.05
scnpilot_solids1_trim150_scaffold_1108_curated
Class: Gemmatimonadetes (58.33%)
24 26145 bp 64.61 1.00 84.83
scnpilot_solids1_trim150_scaffold_1087_curated
Domain: Bacteria (75%)
16 22163 bp 67.55 1.00 85.66
scnpilot_solids1_trim150_scaffold_1873_curated
Species: Gemmatimonas aurantiaca (50%)
14 19781 bp 64.59 1.00 85.16
scnpilot_solids1_trim150_scaffold_912_curated
Phylum: Gemmatimonadetes (50%)
16 18982 bp 66.09 1.00 91.27
scnpilot_solids1_trim150_scaffold_1790_curated
Domain: Bacteria (81.25%)
16 17931 bp 67.18 1.00 84.27
scnpilot_solids1_trim150_scaffold_993_curated
Species: Gemmatimonadetes bacterium KBS708 (75%)
12 17838 bp 67.94 1.00 90.62
scnpilot_solids1_trim150_scaffold_1024_curated
Class: Gemmatimonadetes (53.85%)
13 17353 bp 65.38 1.00 91.21
scnpilot_solids1_trim150_scaffold_2167_curated
Class: Gemmatimonadetes (72.73%)
11 17219 bp 63.56 1.00 87.79
scnpilot_solids1_trim150_scaffold_1069_curated
Class: Gemmatimonadetes (66.67%)
18 16734 bp 65.43 1.00 97.90
scnpilot_solids1_trim150_scaffold_1466_curated
Species: Gemmatimonadetes bacterium KBS708 (72.73%)
11 16616 bp 65.77 1.00 92.51
scnpilot_solids1_trim150_scaffold_1197_curated
Species: Gemmatimonadetes bacterium KBS708 (63.64%)
11 15583 bp 67.18 1.00 96.01
scnpilot_solids1_trim150_scaffold_3153_curated
Phylum: Gemmatimonadetes (50%)
18 15532 bp 66.40 1.00 81.66
scnpilot_solids1_trim150_scaffold_2595_curated
Phylum: Gemmatimonadetes (53.85%)
13 15221 bp 66.75 1.00 84.83
scnpilot_solids1_trim150_scaffold_2298_curated
Class: Gemmatimonadetes (53.85%)
13 15101 bp 65.85 1.00 94.68
scnpilot_solids1_trim150_scaffold_1222_curated
Phylum: Gemmatimonadetes (57.14%)
14 14821 bp 65.86 1.00 90.32
scnpilot_solids1_trim150_scaffold_1248_curated 20 14558 bp 63.83 1.00 87.35
scnpilot_solids1_trim150_scaffold_1270_curated
Species: Gemmatimonadetes bacterium KBS708 (58.82%)
17 14434 bp 66.15 1.00 90.64
scnpilot_solids1_trim150_scaffold_1293_curated
Species: Gemmatimonadetes bacterium KBS708 (68.75%)
16 14256 bp 65.03 1.00 89.37
scnpilot_solids1_trim150_scaffold_1314_curated
Species: Gemmatimonadetes bacterium KBS708 (61.54%)
13 14102 bp 65.32 1.00 95.62
scnpilot_solids1_trim150_scaffold_1297_curated
Species: Gemmatimonadetes bacterium KBS708 (50%)
8 14000 bp 65.77 1.00 94.01
scnpilot_solids1_trim150_scaffold_2871_curated
Species: Gemmatimonadetes bacterium KBS708 (53.85%)
13 13821 bp 65.52 1.00 92.27
scnpilot_solids1_trim150_scaffold_1366_curated
Species: Gemmatimonas aurantiaca (63.64%)
11 13723 bp 66.73 1.00 91.62
scnpilot_solids1_trim150_scaffold_3144_curated
Phylum: Proteobacteria (58.33%)
12 13711 bp 67.03 1.00 90.45
scnpilot_solids1_trim150_scaffold_1370_curated
Domain: Bacteria (93.75%)
16 13699 bp 66.28 1.00 89.50
scnpilot_solids1_trim150_scaffold_1371_curated
Species: Gemmatimonadetes bacterium KBS708 (50%)
12 13665 bp 66.04 1.00 88.41
scnpilot_solids1_trim150_scaffold_1376_curated
Species: Gemmatimonadetes bacterium KBS708 (76.92%)
13 13639 bp 65.08 1.00 93.44
scnpilot_solids1_trim150_scaffold_1346_curated
Domain: Bacteria (91.67%)
12 13633 bp 65.73 1.00 89.54
scnpilot_solids1_trim150_scaffold_2414_curated
Domain: Bacteria (66.67%)
9 13489 bp 66.60 1.00 91.61
scnpilot_solids1_trim150_scaffold_1392_curated
Species: Gemmatimonas aurantiaca (66.67%)
9 13475 bp 65.33 1.00 88.61
scnpilot_solids1_trim150_scaffold_1442_curated
Species: Gemmatimonadetes bacterium KBS708 (75%)
8 13094 bp 63.17 1.00 56.25
scnpilot_solids1_trim150_scaffold_3682_curated
Species: Gemmatimonadetes bacterium KBS708 (57.14%)
14 13062 bp 65.55 1.00 81.47
scnpilot_solids1_trim150_scaffold_1451_curated
Species: Gemmatimonadetes bacterium KBS708 (55.56%)
9 13041 bp 66.47 1.00 87.30
scnpilot_solids1_trim150_scaffold_1473_curated
Class: Gemmatimonadetes (50%)
16 12869 bp 67.70 1.00 90.08
scnpilot_solids1_trim150_scaffold_1476_curated
Species: Gemmatimonadetes bacterium KBS708 (56.25%)
16 12834 bp 65.90 1.00 84.27
scnpilot_solids1_trim150_scaffold_2061_curated
Species: Gemmatimonadetes bacterium KBS708 (53.85%)
13 12826 bp 66.72 1.00 80.95
scnpilot_solids1_trim150_scaffold_1748_curated
Phylum: Gemmatimonadetes (60%)
10 12564 bp 67.24 1.00 91.86
scnpilot_solids1_trim150_scaffold_1528_curated
Species: Gemmatimonadetes bacterium KBS708 (83.33%)
12 12517 bp 65.76 1.00 96.68
scnpilot_solids1_trim150_scaffold_1562_curated
Species: Gemmatimonadetes bacterium KBS708 (56.25%)
16 12335 bp 66.17 1.00 91.37
scnpilot_solids1_trim150_scaffold_1622_curated
Species: Gemmatimonadetes bacterium KBS708 (92.31%)
13 11974 bp 67.56 1.00 95.28
scnpilot_solids1_trim150_scaffold_4558_curated
Species: Gemmatimonadetes bacterium KBS708 (53.85%)
13 11843 bp 65.07 1.00 89.80
scnpilot_solids1_trim150_scaffold_1684_curated
Species: Gemmatimonadetes bacterium KBS708 (50%)
8 11675 bp 66.45 1.00 86.36
scnpilot_solids1_trim150_scaffold_1687_curated
Domain: Bacteria (84.62%)
13 11589 bp 67.28 1.00 83.10
scnpilot_solids1_trim150_scaffold_1715_curated
Domain: Bacteria (90%)
10 11502 bp 65.07 1.00 86.78
scnpilot_solids1_trim150_scaffold_5197_curated
Class: Gemmatimonadetes (60%)
15 11284 bp 65.35 1.00 89.25
scnpilot_solids1_trim150_scaffold_1733_curated
Phylum: Gemmatimonadetes (55.56%)
9 11267 bp 66.73 1.00 88.40
scnpilot_solids1_trim150_scaffold_1755_curated
Class: Gemmatimonadetes (50%)
10 11245 bp 66.56 1.00 90.84
scnpilot_solids1_trim150_scaffold_2166_curated
Species: Gemmatimonadetes bacterium KBS708 (55.56%)
9 11229 bp 65.86 1.00 91.13
scnpilot_solids1_trim150_scaffold_1765_curated
Species: Gemmatimonadetes bacterium KBS708 (50%)
6 11062 bp 66.05 1.00 96.03
scnpilot_solids1_trim150_scaffold_4256_curated
Domain: Bacteria (85.71%)
7 10800 bp 67.66 1.00 88.78
Displaying items 1-50 of 623 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.