ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_101710_128

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 148588..149517

Top 3 Functional Annotations

Value Algorithm Source
Transporter n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U6ZN87_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 285.0
  • Bit_score: 409
  • Evalue 2.10e-111
Contig34, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77418.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 284.0
  • Bit_score: 410
  • Evalue 1.80e-111
transporter similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 287.0
  • Bit_score: 407
  • Evalue 2.30e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 930
ATGAACGGATCGAATACGCCGGCACATGGCTCAGGCGGTTGGCTGAATGGATTTATCGGGGTGCTGATCTTTAGCGGATCGCTACCGGCAACAAGAATTGCCGTAAAGGAAATGAATCCTTTATTCCTCACCGCAGGCCGGGCGGTTATTGCCGGTATGCTGGCTTTGGTGGCGCTCCGGTGGTTTAAGGAAAAACGGCCGTCGCGGCAACAGCTGTTGCCGCTATTCCTGGTTGCCCTGGGCGGTGTTATTGGCTTCCCCTTGCTGTCGGCCTGGGCCTTGCAGCATGTTACTTCGGCGCATGCCATCGTATTCCTCGGACTGCTGCCCTTGTCTACGGCGATATTTGGTGTACTACGTGGTGGCGAACGGCCGGGAGCAGTGTTCTGGATTTTTTCGATAGCCGGCAGTTTGCTGGTCGTGGGGTATGCTGCGGCAGGCGGTTTGGCGGGCAACCCGGTCGGCGATTTGTTGATGTTGCTGGCGGTATTGGTATGCGGCCTGGGTTATGCAGAAGGCGCGATCCTCTCCAGGACTATGGGTGGCTGGCAGGTTATATCCTGGGCCCTGGTATTGTCCTTGCCGGTTATGTTGCTCTTGCTGTTTCGGTACTGGCCTGCGCCTATGACTATGGATGCCGTAAGCCCCGCCGGCTGGTTGAGCCTGGCCTATGTAGGTGTGTTCAGTATGTTTGTCGGTTTTATATTCTGGTACCGGGGCCTGGCGCAGGGCGGTATTGCAGCCGTAGGACAGCTGCAGTTGTTGCAGCCGCTTTTTGGCCTGGCCCTGGCTGCCGTTTTATTACAGGAAGAAGTTAGCCTAAGTATGTTAGGCATTACCATCGGCGTGATGATCTGCGTGGCCGGTTCTCGCAGGTTTGCCCGGCGCAAAGCCGCTGTGCCCGCTGGTTTTCCTGGTAATGAGCATTAA
PROTEIN sequence
Length: 310
MNGSNTPAHGSGGWLNGFIGVLIFSGSLPATRIAVKEMNPLFLTAGRAVIAGMLALVALRWFKEKRPSRQQLLPLFLVALGGVIGFPLLSAWALQHVTSAHAIVFLGLLPLSTAIFGVLRGGERPGAVFWIFSIAGSLLVVGYAAAGGLAGNPVGDLLMLLAVLVCGLGYAEGAILSRTMGGWQVISWALVLSLPVMLLLLFRYWPAPMTMDAVSPAGWLSLAYVGVFSMFVGFIFWYRGLAQGGIAAVGQLQLLQPLFGLALAAVLLQEEVSLSMLGITIGVMICVAGSRRFARRKAAVPAGFPGNEH*