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ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

ALUMROCK_MS4_Thiothrix_nivea_50_1

In projects: ALUMROCK_MS4 | alumrock-genomes

Consensus taxonomy: Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: ALUMROCK_MS4_Thiothrix_nivea-related_50_537 Manually curated genome
Original version: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

Properties

Avg. coverage: 1.00 Longest contig: 22.92 Kbp Bin length: 3.64 Mbp GC content: 50.37 %

Contigs count: 814 Features count: 4395 rRNAs count: 0 tRNAs count: 45

Genome completeness

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6

Displaying items 801-814 of 814 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
ar4r2_scaffold_1964 Species: Thiothrix nivea (63.64%)	11	12658 bp	48.42	1.00	91.60
ar4r2_scaffold_10378 Species: Thiothrix nivea (50%)	14	12788 bp	53.33	1.00	91.23
ar4r2_scaffold_8395 Species: Thiothrix nivea (70%)	10	12826 bp	51.04	1.00	93.72
ar4r2_scaffold_7981 Domain: Bacteria (61.54%)	13	13031 bp	50.94	1.00	90.82
ar4r2_scaffold_4961 Species: Thiothrix nivea (87.5%)	16	13259 bp	49.69	1.00	92.36
ar4r2_scaffold_4906 Species: Thiothrix nivea (50%)	18	13504 bp	53.98	1.00	92.91
ar4r2_scaffold_3905 Species: Thiothrix nivea (53.33%)	15	14192 bp	51.22	1.00	88.99
ar4r2_scaffold_4914 Species: Thiothrix nivea (66.67%)	18	14952 bp	49.10	1.00	95.04
ar4r2_scaffold_3981 Species: Thiothrix nivea (80%)	15	16754 bp	49.24	1.00	92.97
ar4r2_scaffold_2746 Phylum: Proteobacteria (71.43%)	21	16913 bp	52.16	1.00	92.43
ar4r2_scaffold_4629 Class: Gammaproteobacteria (50%)	22	17294 bp	49.27	1.00	93.90
ar4r2_scaffold_1636 Phylum: Proteobacteria (70%)	20	18468 bp	42.30	1.00	94.69
ar4r2_scaffold_1232 Species: Thiothrix nivea (59.09%)	22	19931 bp	48.83	1.00	94.38
ar4r2_scaffold_1068 Class: Gammaproteobacteria (50%)	20	22915 bp	51.56	1.00	95.53

Displaying items 801-814 of 814 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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