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NECEvent2014_8_4_scaffold_662

Alias: 178_004_scaffold_662

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_662_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..100
DNA (99bp) protein (33aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=14 Tax=Clostridium perfringens RepID=EFTU_CLOP1
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
NECEvent2014_8_4_scaffold_662_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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486..710
DNA (225bp) protein (75aa)
Protein translocase subunit SecE n=4 Tax=Clostridium perfringens RepID=H7CZC5_CLOPF
secE; preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
NECEvent2014_8_4_scaffold_662_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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748..1269
DNA (522bp) protein (174aa)
Transcription termination/antitermination protein NusG n=6 Tax=Clostridium perfringens RepID=H7CZC4_CLOPF rbh
nusG; transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
NECEvent2014_8_4_scaffold_662_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1344..1769
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=6 Tax=Clostridium perfringens RepID=RL11_CLOP1
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
NECEvent2014_8_4_scaffold_662_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1827..2516
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=6 Tax=Clostridium perfringens RepID=RL1_CLOP1 rbh
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
NECEvent2014_8_4_scaffold_662_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2733..3233
DNA (501bp) protein (167aa)
50S ribosomal protein L10 n=5 Tax=Clostridium perfringens RepID=H7CZC1_CLOPF rbh
50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00362}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
rplJ; 50S ribosomal protein L10
NECEvent2014_8_4_scaffold_662_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3288..3653
DNA (366bp) protein (122aa)
50S ribosomal protein L7/L12 n=8 Tax=Clostridium perfringens RepID=RL7_CLOP1
rplL; 50S ribosomal protein L7/L12
Ribosomal protein L {ECO:0000313|EMBL:ABA64416.1}; Flags: Fragment;; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_4_scaffold_662_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3958..7662
DNA (3705bp) protein (1235aa)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=5 Tax=Clostridium perfringens RepID=RPOB_CLOP1 rbh
NECEvent2014_8_4_scaffold_662_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7742..9550
DNA (1809bp) protein (603aa)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJT2_CLOPF
Displaying 9 items

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