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SCNpilot_cont_300_bf_scaffold_87_curated

Search features with annotation key words

Displaying items 31-60 of 1758 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_87_curated_31
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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29314..30357
DNA (1044bp) protein (348aa)
Patatin n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ER35_METSB
patatin; K07001 NTE family protein
Patatin {ECO:0000313|EMBL:ACK49780.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_300_bf_scaffold_87_curated_32
unknown

Not on your lists

30445..30672
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_87_curated_33
unknown

Not on your lists

30757..30888
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_87_curated_34
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30875..31534)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003061A6B
50S ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:KFG66846.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_35
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31531..32313)
DNA (783bp) protein (261aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hydroxypyruvate isomerase (EC:5.3.1.22)
Hydroxypyruvate isomerase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FKD9_9RHOB
SCNpilot_cont_300_bf_scaffold_87_curated_36
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32401..32781)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003696963
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ44593.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
type IV pilus assembly PilZ
SCNpilot_cont_300_bf_scaffold_87_curated_37
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32937..33971)
DNA (1035bp) protein (345aa)
Rieske (2Fe-2S) iron-sulfur domain; K03862 vanillate monooxygenase [EC:1.14.13.82]
Rieske (2Fe-2S) protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034AABC6
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCNpilot_cont_300_bf_scaffold_87_curated_38
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34049..35896
DNA (1848bp) protein (616aa)
ABC transporter permease n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00037EDABF
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:AJE46764.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein
SCNpilot_cont_300_bf_scaffold_87_curated_39
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35945..37132
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3D355_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL83571.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_40
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37215..38273
DNA (1059bp) protein (353aa)
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJE46759.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
SCNpilot_cont_300_bf_scaffold_87_curated_41
bacterium YEK0313, Bacteria

Not on your lists

38570..40633
DNA (2064bp) protein (688aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ELN5_BRASB
Protoporphyrinogen oxidase {ECO:0000313|EMBL:CEJ16084.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_42
bacterium YEK0313, Bacteria

Not on your lists

40685..42523
DNA (1839bp) protein (613aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAF2_9BRAD
Putative multidrug export ATP-binding/permease protein {ECO:0000313|EMBL:CEJ16085.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial rbh
SCNpilot_cont_300_bf_scaffold_87_curated_43
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42604..43086
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000362AA83
Membrane protein {ECO:0000313|EMBL:ETR74878.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_44
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43384..45138
DNA (1755bp) protein (585aa)
Putative potassium efflux transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D036_9RHIZ
Putative potassium efflux transporter {ECO:0000313|EMBL:EYR79985.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
potassium efflux system protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family
SCNpilot_cont_300_bf_scaffold_87_curated_45
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45163..46359)
DNA (1197bp) protein (399aa)
FAD dependent oxidoreductase; K00480 salicylate hydroxylase [EC:1.14.13.1]
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003719F74
Putative n-hydroxybenzoate hydroxylase {ECO:0000313|EMBL:ETY77437.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
SCNpilot_cont_300_bf_scaffold_87_curated_46
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46391..47593)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBT8_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ69754.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_300_bf_scaffold_87_curated_47
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47661..48170)
DNA (510bp) protein (170aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBT7_SPHWW
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABQ69753.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_300_bf_scaffold_87_curated_48
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(48366..49955)
DNA (1590bp) protein (530aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U030_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM76237.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_49
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49952..50569)
DNA (618bp) protein (206aa)
Putative S-adenosyl-L-methionine-dependent methyltransferases n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F1Q7_9PROT
Putative S-adenosyl-L-methionine-dependent methyltransferases {ECO:0000313|EMBL:CDK99307.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_50
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50941..51363)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K592_AGRVS
Uncharacterized protein {ECO:0000313|EMBL:KFC73977.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_51
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51515..52309
DNA (795bp) protein (265aa)
Putative universal stress protein, UspA-like protein n=2 Tax=Methylobacterium extorquens RepID=C5AZX2_METEA
Universal stress protein, UspA {ECO:0000313|EMBL:KFC66825.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
universal stress protein, UspA-like protein
SCNpilot_cont_300_bf_scaffold_87_curated_52
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52401..53120
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7M5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36734.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Crp/FNR family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
SCNpilot_cont_300_bf_scaffold_87_curated_53
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53146..53694)
DNA (549bp) protein (183aa)
HTH-type transcriptional regulator PecS n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYG8_9RHIZ
HTH-type transcriptional regulator PecS {ECO:0000313|EMBL:EYR83649.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
MarR transcriptional regulator
SCNpilot_cont_300_bf_scaffold_87_curated_54
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53866..54672
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7M6_HYPSM
hypothetical protein; K02049 NitT/TauT family transport system ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:CCB63499.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_300_bf_scaffold_87_curated_55
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54669..55466
DNA (798bp) protein (266aa)
Putative aliphatic sulfonates transport permease protein ssuC n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7M7_HYPSM
aliphatic sulfonates transport permease ssuC
Putative aliphatic sulfonates transport permease protein ssuC {ECO:0000313|EMBL:CCB63500.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_300_bf_scaffold_87_curated_56
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55496..56938
DNA (1443bp) protein (481aa)
amidohydrolase; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
Amidohydrolase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RYJ3_9BURK
Amidohydrolase {ECO:0000313|EMBL:EHP44684.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
SCNpilot_cont_300_bf_scaffold_87_curated_57
unknown

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comp(56954..58021)
DNA (1068bp) protein (356aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_87_curated_58
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58124..59017)
DNA (894bp) protein (298aa)
Outer membrane protein Omp31 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8INA9_AZOC5
outer membrane protein Omp31
Outer membrane protein Omp31 {ECO:0000313|EMBL:BAF89725.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_87_curated_59
bacterium YEK0313, Bacteria

Not on your lists

59202..60293
DNA (1092bp) protein (364aa)
Transcriptional regulator, LuxR family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3J6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CEJ10849.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
LuxR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_87_curated_60
bacterium YEK0313, Bacteria

Not on your lists

60324..61421
DNA (1098bp) protein (366aa)
UPI0003CFD968 related cluster n=1 Tax=unknown RepID=UPI0003CFD968
Uncharacterized protein {ECO:0000313|EMBL:CEJ10850.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
LuxR family transcriptional regulator
Displaying items 31-60 of 1758 in total

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