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SCNpilot_cont_300_bf_scaffold_87_curated

Search features with annotation key words

Displaying items 61-90 of 1758 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_87_curated_61
Mycobacterium colombiense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61422..62981)
DNA (1560bp) protein (520aa)
Rieske (2Fe-2S) domain-containing protein n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J5EIT4_9MYCO
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:EJO89414.1}; TaxID=1041522 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium colombiense CECT 3035.;"
Rieske (2Fe-2S) domain-containing protein
SCNpilot_cont_300_bf_scaffold_87_curated_62
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63040..63954
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. AU12-08 RepID=S9S3Q4_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EPX98792.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_87_curated_63
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64086..65009)
DNA (924bp) protein (308aa)
phthalate 4,5-dioxygenase; K03863 vanillate monooxygenase [EC:1.14.13.82]
Ferredoxin n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQU2_COMTE
Ferredoxin {ECO:0000313|EMBL:EED67087.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
SCNpilot_cont_300_bf_scaffold_87_curated_64
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65006..66037)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003786D09
zinc-binding alcohol dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_cont_300_bf_scaffold_87_curated_65
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66037..66591)
DNA (555bp) protein (185aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H7S7_CELFA
Activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AEE45761.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_300_bf_scaffold_87_curated_66
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66678..67910)
DNA (1233bp) protein (411aa)
Putative MFS transporter n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H7B0_ACTM4
putative MFS transporter
Putative MFS transporter {ECO:0000313|EMBL:BAL88897.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
SCNpilot_cont_300_bf_scaffold_87_curated_67
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68021..69274)
DNA (1254bp) protein (418aa)
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
D-amino acid dehydrogenase, small subunit (EC:1.4.99.1); K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
D-amino acid dehydrogenase small subunit n=1 Tax=Hoeflea sp. 108 RepID=UPI000369DFC5
SCNpilot_cont_300_bf_scaffold_87_curated_68
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69296..70417)
DNA (1122bp) protein (374aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
alr; alanine racemase; K01775 alanine racemase [EC:5.1.1.1] rbh
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037551C2
SCNpilot_cont_300_bf_scaffold_87_curated_69
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70545..71009
DNA (465bp) protein (155aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. AP16 RepID=J2WE62_9RHIZ
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:AHK45325.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
HTH-type transcriptional regulator y4sM
SCNpilot_cont_300_bf_scaffold_87_curated_70
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71016..71549)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MFI2_RHIL3
ATPase {ECO:0000313|EMBL:KGM34843.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_71
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71701..72999
DNA (1299bp) protein (433aa)
amidohydrolase; K01487 guanine deaminase [EC:3.5.4.3]
Guanine deaminase {ECO:0000313|EMBL:ABQ30360.1}; EC=3.5.4.3 {ECO:0000313|EMBL:ABQ30360.1};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Guanine deaminase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FXM8_ACICJ
SCNpilot_cont_300_bf_scaffold_87_curated_72
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73095..74687
DNA (1593bp) protein (531aa)
putative alkaline phosphatase; K01113 alkaline phosphatase D [EC:3.1.3.1]
Putative alkaline phosphatase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WPH5_9RHIZ
Putative alkaline phosphatase {ECO:0000313|EMBL:EIZ82268.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
SCNpilot_cont_300_bf_scaffold_87_curated_73
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74824..76416
DNA (1593bp) protein (531aa)
putative alkaline phosphatase; K01113 alkaline phosphatase D [EC:3.1.3.1]
Putative alkaline phosphatase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WPH5_9RHIZ
Putative alkaline phosphatase {ECO:0000313|EMBL:EIZ82268.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
SCNpilot_cont_300_bf_scaffold_87_curated_74
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76427..78205)
DNA (1779bp) protein (593aa)
Cl-channel voltage-gated family protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y290_9RHIZ
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:EHH14073.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Cl-channel voltage-gated family protein; K03281 chloride channel protein, CIC family
SCNpilot_cont_300_bf_scaffold_87_curated_75
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78317..80854)
DNA (2538bp) protein (846aa)
Putative bacteriophytochrome n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GD33_9BRAD
Putative bacteriophytochrome {ECO:0000313|EMBL:BAL78670.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
putative bacteriophytochrome
SCNpilot_cont_300_bf_scaffold_87_curated_76
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80851..81435)
DNA (585bp) protein (195aa)
Putative heme oxygenase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T1B9_9BRAD
Putative heme oxygenase {ECO:0000313|EMBL:CCE00246.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
heme oxygenase; K07215 heme oxygenase
SCNpilot_cont_300_bf_scaffold_87_curated_77
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81740..82282)
DNA (543bp) protein (181aa)
membrane protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003492100
Putative outer membrane protein {ECO:0000313|EMBL:EHR01739.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein; K08995 putative membrane protein
SCNpilot_cont_300_bf_scaffold_87_curated_78
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82540..82887
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003665ACE
NADPH2:quinone reductase {ECO:0000313|EMBL:ERF81593.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_79
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83025..83555
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037B6C7C
Uncharacterized protein {ECO:0000313|EMBL:KAI95687.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_80
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83824..84654
DNA (831bp) protein (277aa)
PREDICTED: mhp operon transcriptional activator-like n=1 Tax=Ceratitis capitata RepID=UPI0003299422
Mhp operon transcriptional activator {ECO:0000313|EMBL:GAO56905.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
DNA-binding protein transcriptional activator; K05818 IclR family transcriptional regulator, mhp operon transcriptional activator
SCNpilot_cont_300_bf_scaffold_87_curated_81
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84658..85917)
DNA (1260bp) protein (420aa)
fad dependent oxidoreductase; K00480 salicylate hydroxylase [EC:1.14.13.1]
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QVR9_RALPI
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
SCNpilot_cont_300_bf_scaffold_87_curated_82
Sphingomonas sp. RW5, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85941..86690)
DNA (750bp) protein (250aa)
ORF 3 protein n=1 Tax=Sphingomonas sp. RW5 RepID=O86923_9SPHN
ORF 3 protein {ECO:0000313|EMBL:CAA12269.1}; TaxID=74360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RW5.;"
glutathione s-transferase domain-containing protein
SCNpilot_cont_300_bf_scaffold_87_curated_83
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86848..88110
DNA (1263bp) protein (421aa)
Membrane protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM38_NITHX
Membrane protein {ECO:0000313|EMBL:KKC32060.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
membrane protein
SCNpilot_cont_300_bf_scaffold_87_curated_84
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88124..88756)
DNA (633bp) protein (211aa)
UbiE/COQ5 family methlytransferase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EI23_9RHIZ
Ubiquinone biosynthesis protein UbiE {ECO:0000313|EMBL:ETR78345.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
methyltransferase
SCNpilot_cont_300_bf_scaffold_87_curated_85
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88806..89711)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4NJ46_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ81862.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_300_bf_scaffold_87_curated_86
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89773..91356)
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E1C2D
Na+/H+ antiporter protein; K03316 monovalent cation:H+ antiporter, CPA1 family
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_cont_300_bf_scaffold_87_curated_87
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91430..92116)
DNA (687bp) protein (229aa)
Transcriptional regulator, TetR family n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TVQ7_9BRAD
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCE10545.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_87_curated_88
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92195..93355
DNA (1161bp) protein (387aa)
Monooxygenase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S1N0_9SPHN
monooxygenase
Monooxygenase {ECO:0000313|EMBL:AGH49905.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_87_curated_89
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93345..94874
DNA (1530bp) protein (510aa)
Putative oxygenase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13RD5_BURXL
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KJC47087.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
putative oxygenase
SCNpilot_cont_300_bf_scaffold_87_curated_90
Roseivivax isoporae, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94864..95361)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Loktanella vestfoldensis RepID=UPI00036FB8D2
Acetyltransferase {ECO:0000313|EMBL:ETX29423.1}; TaxID=1449351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax isoporae LMG 25204.;"
acetyltranferase
Displaying items 61-90 of 1758 in total

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