name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_4405_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..511)
|
Glutamate--tRNA ligase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C863_9RHIZ
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
gltX; glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
|
|
SCNpilot_expt_1000_bf_scaffold_4405_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(645..2417)
|
Di-and tricarboxylate transporter {ECO:0000313|EMBL:EYR80588.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Di-and tricarboxylate transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CNZ4_9RHIZ
rbh
transporter
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4405_curated_3
unknown
|
Not on your lists |
2441..3001
|
hypothetical protein n=1 Tax=Rhizobium gallicum RepID=UPI0003678F8B
|
|
SCNpilot_expt_1000_bf_scaffold_4405_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2823..3575)
|
Integral membrane protein TerC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY29_9RHIZ
rbh
Integral membrane protein TerC {ECO:0000313|EMBL:EYR80587.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Membrane protein TerC, possibly involved in tellurium resistance
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4405_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3687..4367)
|
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:EYR80586.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000364231B
TetR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_4405_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4499..5716
|
Multidrug resistance protein A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEJ4_9RHIZ
rbh
Multidrug resistance efflux pump {ECO:0000313|EMBL:EYR80585.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
secretion protein HlyD family protein; K03543 multidrug resistance protein A
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4405_curated_7
unknown
|
Not on your lists |
comp(6010..6111)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4405_curated_8
unknown
|
Not on your lists |
comp(6160..6297)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4405_curated_9
unknown
|
Not on your lists |
comp(6316..6681)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4405_curated_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6806..7378
|
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EYR80584.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative drug resistance transporter, EmrB/QacA subfamily
Putative drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A0Q8_RHIFH
|
|
SCNpilot_expt_1000_bf_scaffold_4405_curated_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7657..8523
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDG2_9RHIZ
rbh
Cytolysin, a secreted calcineurin-like phosphatase {ECO:0000313|EMBL:EYR80583.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4405_curated_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8614..9657
|
Regulatory protein LacI {ECO:0000313|EMBL:EYR80582.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transcriptional regulatory protein, LacI family; K02529 LacI family transcriptional regulator
rbh
Putative transcriptional regulatory protein, LacI family n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3M8Y2_RHISN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4405_curated_13
unknown
|
Not on your lists |
comp(9777..10130)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4405_curated_14
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11238..11423
|
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
xylA; xylose isomerase (EC:5.3.1.5)
Xylose isomerase n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FZK4_RHIML
|