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H2-16-all-fractions_metab_57

wsip-metawrap-drep-bins_Sphingomonadales_64_3
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Sphingomonadales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 51-100 of 230 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
H2-16-all-fractions_k255_2941107
Genus: Sphingobium (66.67%)
3 1899 bp 63.56 4.50 96.52
H2-16-all-fractions_k255_1160379
Genus: Sphingobium (72.73%)
22 22725 bp 64.52 1.97 96.45
H2-16-all-fractions_k255_6275149
Genus: Sphingomonas (71.43%)
7 5701 bp 63.94 4.26 96.35
H2-16-all-fractions_k255_6037754
Genus: Sphingomonas (50%)
4 3998 bp 64.81 1.35 96.35
H2-16-all-fractions_k255_4681803
Order: Sphingomonadales (85.71%)
7 8010 bp 63.46 1.59 96.22
H2-16-all-fractions_k255_682641
Order: Alteromonadales (66.67%)
3 2825 bp 63.19 9.72 96.21
H2-16-all-fractions_k255_6066374
Genus: Novosphingobium (50%)
4 3661 bp 63.94 3.56 96.20
H2-16-all-fractions_k255_6175453
Order: Sphingomonadales (61.54%)
91 98375 bp 64.34 2.80 96.15
H2-16-all-fractions_k255_4813679
Class: Alphaproteobacteria (71.43%)
7 9288 bp 64.14 4.13 96.09
H2-16-all-fractions_k255_6619828
Order: Sphingomonadales (100%)
5 2499 bp 63.23 0.60 95.92
H2-16-all-fractions_k255_965995
Order: Sphingomonadales (78.13%)
32 26447 bp 64.38 3.35 95.85
H2-16-all-fractions_k255_3303462
Order: Sphingomonadales (70.59%)
17 18133 bp 62.76 3.01 95.83
H2-16-all-fractions_k255_3177848
Order: Sphingomonadales (81.08%)
37 39460 bp 65.18 4.10 95.76
H2-16-all-fractions_k255_4843582
Phylum: Proteobacteria (57.14%)
7 5246 bp 61.86 4.63 95.73
H2-16-all-fractions_k255_5280493
Species: Sphingomonas sp. WHSC-8 (50%)
2 2266 bp 64.70 1.72 95.59
H2-16-all-fractions_k255_5075024
Species: Zymomonas mobilis (50%)
2 1822 bp 63.23 4.36 95.50
H2-16-all-fractions_k255_1716293
Genus: Sphingomonas (50%)
46 45283 bp 64.94 3.44 95.46
H2-16-all-fractions_k255_6457320
Species: Bradyrhizobium sp. YR681 (50%)
2 1532 bp 61.23 0.20 95.37
H2-16-all-fractions_k255_5798036
Genus: Sphingomonas (100%)
8 4994 bp 64.42 7.90 95.33
H2-16-all-fractions_k255_763625
Species: Sphingopyxis alaskensis (66.67%)
3 1832 bp 62.34 0.98 95.31
H2-16-all-fractions_k255_4844892
Order: Sphingomonadales (55.56%)
9 7275 bp 65.13 1.44 95.22
H2-16-all-fractions_k255_4698602
Order: Sphingomonadales (62.86%)
35 26303 bp 64.22 4.48 94.87
H2-16-all-fractions_k255_4160113
Genus: Sphingomonas (50%)
6 4965 bp 64.45 4.80 94.86
H2-16-all-fractions_k255_6037958
Genus: Sphingomonas (50%)
6 2995 bp 64.24 2.40 94.76
H2-16-all-fractions_k255_2422422
Genus: Sphingomonas (52.87%)
87 80991 bp 64.31 2.82 94.76
H2-16-all-fractions_k255_6704004
Order: Sphingomonadales (75%)
4 2074 bp 63.36 5.14 94.74
H2-16-all-fractions_k255_1390731
Class: Alphaproteobacteria (50%)
6 2577 bp 64.45 5.18 94.53
H2-16-all-fractions_k255_581195
Species: Xanthobacter autotrophicus (50%)
2 2433 bp 64.08 4.75 94.45
H2-16-all-fractions_k255_3278316
Order: Sphingomonadales (66.67%)
9 7344 bp 64.69 3.19 94.40
H2-16-all-fractions_k255_6508876
Genus: Sphingomonas (58.54%)
41 39746 bp 65.00 3.37 94.39
H2-16-all-fractions_k255_6499420
Genus: Sphingomonas (55.17%)
87 88959 bp 63.94 3.39 94.36
H2-16-all-fractions_k255_7557066
Order: Sphingomonadales (84.62%)
13 12011 bp 63.72 3.72 94.36
H2-16-all-fractions_k255_3290022
Order: Sphingomonadales (76.47%)
34 29263 bp 64.97 4.52 94.32
H2-16-all-fractions_k255_5021465
Order: Sphingomonadales (57.14%)
7 6190 bp 60.90 3.95 94.31
H2-16-all-fractions_k255_4674234
Order: Sphingomonadales (73.08%)
26 21104 bp 64.91 3.40 94.29
H2-16-all-fractions_k255_4713457
Genus: Sphingomonas (55.56%)
45 44362 bp 63.89 2.98 94.25
H2-16-all-fractions_k255_3086106
Order: Sphingomonadales (51.16%)
86 88743 bp 64.80 2.97 94.16
H2-16-all-fractions_k255_2900370
Species: Sphingomonas changbaiensis (50%)
4 3060 bp 64.35 4.41 94.12
H2-16-all-fractions_k255_8910409
Genus: Sphingomonas (60%)
5 3157 bp 62.72 5.04 94.08
H2-16-all-fractions_k255_7885046
Order: Sphingomonadales (60%)
5 2532 bp 64.02 2.25 93.96
H2-16-all-fractions_k255_3140480
Genus: Sphingomonas (52.08%)
144 131827 bp 64.32 3.20 93.88
H2-16-all-fractions_k255_2578349
Class: Alphaproteobacteria (50%)
10 15548 bp 61.02 3.62 93.83
H2-16-all-fractions_k255_3276063
Class: Alphaproteobacteria (66.67%)
3 1567 bp 63.50 1.44 93.81
H2-16-all-fractions_k255_3052320
Genus: Sphingomonas (50%)
10 5037 bp 64.03 4.82 93.81
H2-16-all-fractions_k255_281141
Order: Sphingomonadales (75%)
8 7523 bp 64.35 2.49 93.79
H2-16-all-fractions_k255_2013665
Order: Sphingomonadales (71.43%)
7 10059 bp 62.99 5.96 93.77
H2-16-all-fractions_k255_457283
Genus: Sphingomonas (50%)
8 5983 bp 65.12 2.66 93.77
H2-16-all-fractions_k255_1251316
Order: Sphingomonadales (54.29%)
35 48083 bp 63.34 2.34 93.74
H2-16-all-fractions_k255_8515010
Genus: Sphingomonas (50%)
8 8328 bp 63.48 4.57 93.66
H2-16-all-fractions_k255_2790235
Phylum: Proteobacteria (54.55%)
11 16071 bp 64.56 1.77 93.65
Displaying items 51-100 of 230 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.