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CN-SCN_Erythrobacter_14x

CN-SCN_Sphingomonadales_62_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Sphingomonadales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.72 Longest contig: 128.95 Kbp Bin length: 2.80 Mbp GC content: 61.96 %
Contigs count: 136 Features count: 2751 rRNAs count: 0 tRNAs count: 36

Genome completeness

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1

Description

Partial 38

Displaying items 51-100 of 136 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_8562 ERY14_90
Order: Sphingomonadales (100%)
7 7306 bp 62.40 13.81 93.99
cn_combo_scaffold_12001 ERY14_99
Species: BJP_08E140C01_10KDA_Sphingomonadales_62_47 (60%)
5 5313 bp 65.20 13.80 97.06
cn_combo_scaffold_5394 ERY14_129
Order: Sphingomonadales (71.43%)
14 10997 bp 58.29 13.80 82.56
cn_combo_scaffold_4945 ERY14_70
Order: Sphingomonadales (58.33%)
12 11874 bp 61.65 13.79 85.36
cn_combo_scaffold_3751 ERY14_127
Order: Sphingomonadales (76.92%)
13 15402 bp 60.95 13.78 82.59
cn_combo_scaffold_525 ERY14_1
Order: Sphingomonadales (94.07%)
118 128951 bp 61.57 13.77 90.40
cn_combo_scaffold_1297 ERY14_10
Order: Sphingomonadales (76.19%)
42 39088 bp 62.28 13.77 90.10
cn_combo_scaffold_7015 ERY14_82
Order: Sphingomonadales (100%)
3 8721 bp 63.08 13.76 97.01
cn_combo_scaffold_874 ERY14_6
Order: Sphingomonadales (96.36%)
55 54062 bp 62.07 13.75 93.18
cn_combo_scaffold_2391 ERY14_32
Order: Sphingomonadales (89.47%)
19 22990 bp 61.72 13.75 90.35
cn_combo_scaffold_3864 ERY14_54
Genus: Erythrobacter (50%)
12 15029 bp 62.12 13.75 89.99
cn_combo_scaffold_11910 ERY14_108
Class: Alphaproteobacteria (50%)
4 5352 bp 59.21 13.73 88.12
cn_combo_scaffold_8034 ERY14_131
Genus: Novosphingobium (50%)
8 7740 bp 60.87 13.73 90.16
cn_combo_scaffold_7281 ERY14_85
Species: BJP_IG2102_Porphyrobacter_62_18 (50%)
12 8417 bp 62.60 13.71 92.49
cn_combo_scaffold_2059 ERY14_25
Order: Sphingomonadales (96.15%)
26 26610 bp 62.24 13.69 89.71
cn_combo_scaffold_8045 ERY14_86
Order: Sphingomonadales (100%)
8 7735 bp 62.61 13.69 91.42
cn_combo_scaffold_2292 ERY14_121
Order: Sphingomonadales (89.47%)
19 23810 bp 61.73 13.69 90.14
cn_combo_scaffold_2799 ERY14_40
Order: Sphingomonadales (97.3%)
37 26175 bp 62.36 13.68 93.46
cn_combo_scaffold_1071 ERY14_7
Order: Sphingomonadales (97.73%)
44 45691 bp 63.11 13.67 94.00
cn_combo_scaffold_3078 ERY14_43
Order: Sphingomonadales (90%)
20 18466 bp 59.93 13.66 88.98
cn_combo_scaffold_1857 ERY14_21
Order: Sphingomonadales (86.21%)
29 29256 bp 60.12 13.63 90.43
cn_combo_scaffold_6224 ERY14_79
Order: Sphingomonadales (100%)
14 9682 bp 62.63 13.63 90.42
cn_combo_scaffold_723 ERY14_2b
Genus: Erythrobacter (53.85%)
52 66806 bp 61.68 13.62 96.10
cn_combo_scaffold_9890 ERY14_132
Order: Sphingomonadales (100%)
5 6385 bp 60.58 13.61 59.34
cn_combo_scaffold_4569 ERY14_109 17 12883 bp 61.30 13.58 83.01
cn_combo_scaffold_2432 ERY14_34
Order: Sphingomonadales (92.59%)
27 22606 bp 62.02 13.58 92.68
cn_combo_scaffold_1390 ERY14_12
Order: Sphingomonadales (96.97%)
33 36987 bp 61.35 13.56 94.56
cn_combo_scaffold_2062 ERY14_26
Order: Sphingomonadales (85.19%)
27 26555 bp 61.59 13.56 88.25
cn_combo_scaffold_2581 ERY14_35
Order: Sphingomonadales (96%)
25 21544 bp 65.76 13.55 96.72
cn_combo_scaffold_4490 ERY14_64
Order: Sphingomonadales (100%)
14 13094 bp 62.56 13.55 92.36
cn_combo_scaffold_12539 ERY14_102
Order: Sphingomonadales (100%)
14 11974 bp 63.32 13.55 95.08
cn_combo_scaffold_2230 ERY14_29
Species: BJP_IG2102_Porphyrobacter_62_18 (56%)
25 24559 bp 61.07 13.53 88.27
cn_combo_scaffold_3952 ERY14_55
Order: Sphingomonadales (92.86%)
14 14769 bp 63.02 13.51 93.99
cn_combo_scaffold_3112 ERY14_111
Species: Erythrobacter litoralis (75%)
24 18310 bp 62.41 13.50 94.54
cn_combo_scaffold_15593 ERY14_135
Order: Sphingomonadales (60%)
5 5486 bp 61.96 13.49 82.79
cn_combo_scaffold_1598 ERY14_17
Order: Sphingomonadales (96.67%)
30 32612 bp 62.30 13.48 92.91
cn_combo_scaffold_5074 ERY14_112
Class: Alphaproteobacteria (60%)
10 11612 bp 63.15 13.48 90.84
cn_combo_scaffold_6578 ERY14_80
Species: BJP_IG2102_Porphyrobacter_62_18 (50%)
14 9222 bp 62.80 13.47 93.07
cn_combo_scaffold_8258 ERY14_88
Order: Sphingomonadales (81.82%)
11 7552 bp 60.51 13.45 81.16
cn_combo_scaffold_3059 ERY14_42
Order: Sphingomonadales (95.24%)
21 18569 bp 61.98 13.43 90.36
cn_combo_scaffold_1566 ERY14_15
Order: Sphingomonadales (85.71%)
35 33089 bp 60.73 13.42 91.40
cn_combo_scaffold_1864 ERY14_118
Order: Sphingomonadales (66.67%)
21 29178 bp 62.63 13.42 93.49
cn_combo_scaffold_3483 ERY14_52
Order: Sphingomonadales (93.75%)
16 16497 bp 62.29 13.38 92.08
cn_combo_scaffold_9843 ERY14_94
Species: BJP_IG2102_Porphyrobacter_62_18 (50%)
6 6411 bp 61.46 13.38 97.19
cn_combo_scaffold_5934 ERY14_78
Order: Sphingomonadales (80%)
15 17195 bp 60.22 13.37 87.61
cn_combo_scaffold_5009 ERY14_72
Order: Sphingomonadales (88.89%)
9 11741 bp 60.55 13.34 93.81
cn_combo_scaffold_10060 ERY14_116
Species: Erythrobacter litoralis (62.5%)
8 6289 bp 62.47 13.32 93.69
cn_combo_scaffold_835 ERY14_4
Order: Sphingomonadales (97.62%)
42 55450 bp 62.67 13.28 95.72
cn_combo_scaffold_3336 ERY14_50
Order: Sphingomonadales (84.62%)
13 17214 bp 60.25 13.26 92.80
cn_combo_scaffold_3621 ERY14_126
Order: Sphingomonadales (90%)
10 15883 bp 61.25 13.24 86.38
Displaying items 51-100 of 136 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.