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CN-SCN_Erythrobacter_14x

CN-SCN_Sphingomonadales_62_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Sphingomonadales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.72 Longest contig: 128.95 Kbp Bin length: 2.80 Mbp GC content: 61.96 %
Contigs count: 136 Features count: 2751 rRNAs count: 0 tRNAs count: 36

Genome completeness

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1

Description

Partial 38

Displaying items 51-100 of 136 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_1603 ERY14_18
Order: Sphingomonadales (93.1%)
29 32491 bp 61.65 13.96 92.86
cn_combo_scaffold_3336 ERY14_50
Order: Sphingomonadales (84.62%)
13 17214 bp 60.25 13.26 92.80
cn_combo_scaffold_4693 ERY14_65
Order: Sphingomonadales (100%)
15 14217 bp 60.55 12.76 92.76
cn_combo_scaffold_3253 ERY14_49
Order: Sphingomonadales (92.86%)
14 17583 bp 60.76 14.60 92.70
cn_combo_scaffold_2432 ERY14_34
Order: Sphingomonadales (92.59%)
27 22606 bp 62.02 13.58 92.68
cn_combo_scaffold_7281 ERY14_85
Species: BJP_IG2102_Porphyrobacter_62_18 (50%)
12 8417 bp 62.60 13.71 92.49
cn_combo_scaffold_7053 ERY14_83
Order: Sphingomonadales (89.47%)
19 16637 bp 62.10 13.12 92.40
cn_combo_scaffold_16442 ERY14_104
Genus: Erythrobacter (50%)
6 5524 bp 62.55 17.27 92.38
cn_combo_scaffold_4490 ERY14_64
Order: Sphingomonadales (100%)
14 13094 bp 62.56 13.55 92.36
cn_combo_scaffold_4353 ERY14_59
Order: Sphingomonadales (93.33%)
15 13446 bp 60.93 14.50 92.24
cn_combo_scaffold_2399 ERY14_33
Order: Sphingomonadales (100%)
27 22903 bp 63.18 14.26 92.08
cn_combo_scaffold_3483 ERY14_52
Order: Sphingomonadales (93.75%)
16 16497 bp 62.29 13.38 92.08
cn_combo_scaffold_858 ERY14_5
Order: Sphingomonadales (96.55%)
58 54444 bp 62.77 14.05 92.07
cn_combo_scaffold_8386 ERY14_89
Species: Erythrobacter sp. NAP1 (50%)
4 7443 bp 62.89 14.12 91.98
cn_combo_scaffold_2327 ERY14_31
Order: Sphingomonadales (96.15%)
26 23511 bp 60.81 13.16 91.85
cn_combo_scaffold_2532 ERY14_122
Order: Sphingomonadales (84.21%)
19 21918 bp 62.92 13.82 91.77
cn_combo_scaffold_8629 ERY14_91
Species: BJP_IG2102_Porphyrobacter_62_18 (50%)
10 8834 bp 63.50 14.39 91.73
cn_combo_scaffold_4450 ERY14_62
Order: Sphingomonadales (83.33%)
12 13194 bp 62.16 12.54 91.68
cn_combo_scaffold_4732 ERY14_66
Order: Sphingomonadales (100%)
12 12410 bp 63.31 14.50 91.43
cn_combo_scaffold_8045 ERY14_86
Order: Sphingomonadales (100%)
8 7735 bp 62.61 13.69 91.42
cn_combo_scaffold_543 ERY14_2a
Order: Sphingomonadales (78.87%)
71 73757 bp 60.76 13.13 91.40
cn_combo_scaffold_1566 ERY14_15
Order: Sphingomonadales (85.71%)
35 33089 bp 60.73 13.42 91.40
cn_combo_scaffold_2822 ERY14_41
Species: BJP_IG2102_Porphyrobacter_62_18 (60%)
30 32697 bp 62.43 14.52 91.20
cn_combo_scaffold_1526 ERY14_14
Order: Sphingomonadales (72.41%)
29 33796 bp 59.08 13.12 91.13
cn_combo_scaffold_1171 ERY14_8
Order: Sphingomonadales (97.62%)
42 42175 bp 61.79 13.95 91.08
cn_combo_scaffold_810 ERY14_3
Order: Sphingomonadales (89.09%)
55 56456 bp 63.45 14.53 91.08
cn_combo_scaffold_7209 ERY14_84
Order: Sphingomonadales (100%)
9 8495 bp 64.94 14.13 90.94
cn_combo_scaffold_1592 ERY14_16
Order: Sphingomonadales (93.94%)
33 32665 bp 62.27 14.27 90.90
cn_combo_scaffold_3467 ERY14_51
Order: Sphingomonadales (88.57%)
35 31976 bp 62.73 14.23 90.88
cn_combo_scaffold_2639 ERY14_37
Order: Sphingomonadales (88.89%)
18 21176 bp 59.50 12.95 90.87
cn_combo_scaffold_5459 ERY14_75
Order: Sphingomonadales (100%)
12 14539 bp 62.71 12.88 90.85
cn_combo_scaffold_5074 ERY14_112
Class: Alphaproteobacteria (60%)
10 11612 bp 63.15 13.48 90.84
cn_combo_scaffold_1857 ERY14_21
Order: Sphingomonadales (86.21%)
29 29256 bp 60.12 13.63 90.43
cn_combo_scaffold_6224 ERY14_79
Order: Sphingomonadales (100%)
14 9682 bp 62.63 13.63 90.42
cn_combo_scaffold_525 ERY14_1
Order: Sphingomonadales (94.07%)
118 128951 bp 61.57 13.77 90.40
cn_combo_scaffold_3059 ERY14_42
Order: Sphingomonadales (95.24%)
21 18569 bp 61.98 13.43 90.36
cn_combo_scaffold_2391 ERY14_32
Order: Sphingomonadales (89.47%)
19 22990 bp 61.72 13.75 90.35
cn_combo_scaffold_6635 ERY14_81
Species: BJP_08E140C01_10KDA_Sphingomonadales_62_47 (62.5%)
8 9148 bp 61.82 12.00 90.31
cn_combo_scaffold_2551 ERY14_123
Order: Sphingomonadales (80%)
20 21779 bp 59.16 14.08 90.25
cn_combo_scaffold_1321 ERY14_11
Order: Sphingomonadales (97.22%)
36 38683 bp 63.12 14.14 90.19
cn_combo_scaffold_1211 ERY14_9
Order: Sphingomonadales (100%)
49 41216 bp 62.89 14.26 90.17
cn_combo_scaffold_8034 ERY14_131
Genus: Novosphingobium (50%)
8 7740 bp 60.87 13.73 90.16
cn_combo_scaffold_2292 ERY14_121
Order: Sphingomonadales (89.47%)
19 23810 bp 61.73 13.69 90.14
cn_combo_scaffold_1297 ERY14_10
Order: Sphingomonadales (76.19%)
42 39088 bp 62.28 13.77 90.10
cn_combo_scaffold_3864 ERY14_54
Genus: Erythrobacter (50%)
12 15029 bp 62.12 13.75 89.99
cn_combo_scaffold_3067 ERY14_44
Order: Sphingomonadales (97.56%)
41 33311 bp 62.06 14.68 89.85
cn_combo_scaffold_12273 ERY14_101
Species: BJP_IG2102_Porphyrobacter_62_18 (81.82%)
11 5210 bp 61.21 14.11 89.83
cn_combo_scaffold_2059 ERY14_25
Order: Sphingomonadales (96.15%)
26 26610 bp 62.24 13.69 89.71
cn_combo_scaffold_1424 ERY14_13
Order: Sphingomonadales (95.16%)
62 60962 bp 62.61 14.14 89.61
cn_combo_scaffold_4820 ERY14_67
Order: Sphingomonadales (63.64%)
11 12218 bp 59.78 12.77 89.57
Displaying items 51-100 of 136 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.