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CN-SCN_Pelagibacterium_44x

CN-SCN_Devosia_64_44
In projects: CN-SCN

Consensus taxonomy: Devosia  →  Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Partial double 90

Displaying items 101-111 of 111 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_69 PEL42_6
Genus: Devosia (73.23%)
254 265028 bp 64.68 42.44 92.50
cn_combo_scaffold_825 PEL42_43
Genus: Devosia (67.24%)
58 55831 bp 59.52 81.38 92.52
cn_combo_scaffold_2866 PEL42_88
Species: Xanthobacter autotrophicus (89.66%)
29 24241 bp 64.72 43.39 92.53
cn_combo_scaffold_9966 PEL42_111
Genus: Devosia (100%)
7 10435 bp 62.31 45.22 92.83
cn_combo_scaffold_1249 PEL42_56
Order: Rhizobiales (64.86%)
37 40227 bp 63.34 38.53 93.14
cn_combo_scaffold_289 PEL42_20
Genus: Devosia (71.58%)
95 107375 bp 64.68 41.86 93.19
cn_combo_scaffold_1791 PEL42_70
Genus: Devosia (100%)
27 29980 bp 65.69 43.84 93.36
cn_combo_scaffold_1079 PEL42_53
Order: Rhizobiales (76.09%)
46 45466 bp 61.30 46.43 93.38
cn_combo_scaffold_8500 PEL42_108
Genus: Devosia (100%)
27 13683 bp 62.38 45.43 93.47
cn_combo_scaffold_5210 PEL42_97
Species: Sinorhizobium fredii (50%)
12 11317 bp 67.13 38.78 93.50
cn_combo_scaffold_150 PEL42_10
Genus: Devosia (52.48%)
141 146903 bp 65.45 45.19 94.98
Displaying items 101-111 of 111 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.