ggKbase home page
Advanced Search
Search Help

CN-SCN_Phenylobacterium_14x

CN-SCN_Caulobacterales_69_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.94 Longest contig: 40.95 Kbp Bin length: 2.69 Mbp GC content: 69.19 %
Contigs count: 245 Features count: 2861 rRNAs count: 0 tRNAs count: 30

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38

Description

Partial 44

Displaying items 51-100 of 245 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_11844 PHE14_205
Order: Caulobacterales (87.5%)
8 5382 bp 65.27 14.53 88.78
cn_combo_scaffold_4600 PHE14_49
Order: Caulobacterales (50%)
12 13308 bp 65.97 11.79 88.83
cn_combo_scaffold_2165 PHE14_9
Order: Caulobacterales (68.97%)
29 25241 bp 69.17 14.42 88.86
cn_combo_scaffold_5951 PHE14_80
Order: Caulobacterales (69.23%)
13 10065 bp 70.40 13.84 89.03
cn_combo_scaffold_5582 PHE14_65
Order: Caulobacterales (92.31%)
13 13674 bp 70.23 15.30 89.07
cn_combo_scaffold_6749 PHE14_104
Genus: Caulobacter (50%)
8 9021 bp 62.02 9.33 89.16
cn_combo_scaffold_2043 PHE14_7
Order: Caulobacterales (75.68%)
37 35477 bp 66.47 13.18 89.16
cn_combo_scaffold_6671 PHE14_101
Order: Caulobacterales (90.91%)
11 9116 bp 67.41 14.24 89.18
cn_combo_scaffold_6696 PHE14_233
Order: Caulobacterales (50%)
8 9089 bp 68.98 14.02 89.25
cn_combo_scaffold_7880 PHE14_126
Genus: Caulobacter (54.55%)
11 7858 bp 71.29 14.23 89.26
cn_combo_scaffold_7186 PHE14_110
Order: Caulobacterales (55.56%)
9 8512 bp 71.24 13.75 89.27
cn_combo_scaffold_7088 PHE14_107
Order: Caulobacterales (80%)
10 8616 bp 70.24 14.44 89.28
cn_combo_scaffold_5844 PHE14_75
Order: Caulobacterales (100%)
11 10247 bp 67.42 14.60 89.38
cn_combo_scaffold_5310 PHE14_61
Order: Caulobacterales (90%)
10 11136 bp 68.01 13.89 89.47
cn_combo_scaffold_2638 PHE14_18
Order: Caulobacterales (100%)
23 23042 bp 69.95 14.52 89.47
cn_combo_scaffold_7884 PHE14_127
Genus: Caulobacter (57.14%)
7 7856 bp 67.20 13.73 89.59
cn_combo_scaffold_3579 PHE14_31
Order: Caulobacterales (60%)
15 16062 bp 68.30 13.87 89.71
cn_combo_scaffold_11610 PHE14_240
Species: R_Phenylobacterium_69_31 (50%)
8 5484 bp 71.28 13.89 89.72
cn_combo_scaffold_9400 PHE14_151
Species: R_Phenylobacterium_69_31 (66.67%)
6 6681 bp 65.11 9.04 89.72
cn_combo_scaffold_6029 PHE14_84
Order: Caulobacterales (92.86%)
14 13386 bp 69.74 14.25 89.76
cn_combo_scaffold_9729 PHE14_158
Order: Caulobacterales (60%)
5 6482 bp 70.84 14.02 89.79
cn_combo_scaffold_12395 PHE14_215
Order: Caulobacterales (72.73%)
11 8930 bp 69.00 14.11 89.90
cn_combo_scaffold_3313 PHE14_26
Order: Caulobacterales (84.62%)
26 28945 bp 70.14 14.47 89.94
cn_combo_scaffold_12082 PHE14_213
Species: Caulobacter sp. AP07 (71.43%)
7 5279 bp 66.93 9.36 89.96
cn_combo_scaffold_8913 PHE14_142
Species: R_Phenylobacterium_70_10 (50%)
8 7056 bp 69.05 12.29 90.01
cn_combo_scaffold_6488 PHE14_99
Order: Caulobacterales (81.25%)
16 16429 bp 69.04 12.98 90.04
cn_combo_scaffold_11164 PHE14_193
Species: Brevundimonas diminuta (87.5%)
8 5693 bp 63.36 8.80 90.06
cn_combo_scaffold_4477 PHE14_44
Order: Caulobacterales (76%)
25 19388 bp 70.21 14.18 90.09
cn_combo_scaffold_12915 PHE14_243
Order: Caulobacterales (53.85%)
13 7857 bp 66.48 10.83 90.11
cn_combo_scaffold_11044 PHE14_189
Order: Caulobacterales (100%)
6 5752 bp 70.76 14.45 90.13
cn_combo_scaffold_11872 PHE14_206
Order: Caulobacterales (100%)
7 5368 bp 68.44 13.84 90.15
cn_combo_scaffold_7174 PHE14_109
Order: Caulobacterales (100%)
9 8522 bp 67.60 14.39 90.19
cn_combo_scaffold_5082 PHE14_59
Order: Caulobacterales (80%)
15 14063 bp 69.17 15.20 90.32
cn_combo_scaffold_4597 PHE14_47
Order: Caulobacterales (52.94%)
17 13208 bp 66.70 11.35 90.38
cn_combo_scaffold_5957 PHE14_81
Order: Caulobacterales (57.14%)
14 10061 bp 69.64 14.61 90.38
cn_combo_scaffold_9593 PHE14_154
Species: R_Phenylobacterium_69_31 (50%)
8 9550 bp 70.16 14.10 90.41
cn_combo_scaffold_9576 PHE14_153
Species: R_Phenylobacterium_70_10 (50%)
8 6572 bp 69.80 13.94 90.43
cn_combo_scaffold_7123 PHE14_108
Order: Caulobacterales (90%)
10 8579 bp 69.54 15.40 90.43
cn_combo_scaffold_2644 PHE14_17
Order: Caulobacterales (82.35%)
17 21147 bp 68.16 14.03 90.44
cn_combo_scaffold_6333 PHE14_93
Order: Caulobacterales (95.65%)
23 17939 bp 68.73 14.28 90.45
cn_combo_scaffold_12029 PHE14_209
Order: Caulobacterales (80%)
5 5300 bp 69.92 14.45 90.51
cn_combo_scaffold_5970 PHE14_82
Order: Caulobacterales (87.5%)
16 10040 bp 69.25 15.61 90.57
cn_combo_scaffold_6740 PHE14_103
Order: Caulobacterales (100%)
9 9032 bp 69.28 14.98 90.58
cn_combo_scaffold_9100 PHE14_147
Order: Caulobacterales (80%)
5 6915 bp 68.84 13.30 90.59
cn_combo_scaffold_8914 PHE14_143
Genus: Caulobacter (50%)
8 8225 bp 70.87 13.47 90.71
cn_combo_scaffold_2013 PHE14_6
Species: Phenylobacterium zucineum (50%)
28 27148 bp 69.91 14.82 90.71
cn_combo_scaffold_9789 PHE14_161
Species: Phenylobacterium zucineum (50%)
10 6444 bp 68.65 14.53 90.74
cn_combo_scaffold_12012 PHE14_210
Species: R_Phenylobacterium_69_31 (50%)
10 8155 bp 67.53 13.34 90.75
cn_combo_scaffold_9329 PHE14_150
Order: Caulobacterales (100%)
8 6728 bp 69.72 13.35 90.78
cn_combo_scaffold_3423 PHE14_28
Order: Caulobacterales (89.47%)
19 16824 bp 69.38 14.60 90.80
Displaying items 51-100 of 245 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.