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dasL2_039_239G1_metabat_metabat_20_fa_fa

L2_039_239G1_public_Clostridium_sp__CAG_299_49_38
In projects: L2_039_239G1_public

Consensus taxonomy: Clostridium sp. CAG:299  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 1-50 of 97 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L2_039_239G1_scaffold_1880
Genus: Clostridium (71.43%)
7 7733 bp 48.86 72.59 94.62
L2_039_239G1_scaffold_2810
Species: Clostridium sp. CAG:299 (75%)
4 5006 bp 47.50 58.25 87.02
L2_039_239G1_scaffold_6070
Species: Clostridium sp. CAG:299 (50%)
2 2512 bp 41.48 57.68 82.40
L2_039_239G1_scaffold_682
Species: Clostridium sp. CAG:299 (95%)
20 23673 bp 47.94 49.33 84.16
L2_039_239G1_scaffold_1503
Species: Clostridium sp. CAG:299 (66.67%)
9 9876 bp 49.23 48.18 89.67
L2_039_239G1_scaffold_603
Species: Clostridium sp. CAG:299 (70.97%)
31 28779 bp 49.58 47.63 84.97
L2_039_239G1_scaffold_647
Species: Clostridium sp. CAG:299 (95.24%)
21 24781 bp 50.79 47.47 87.71
L2_039_239G1_scaffold_2552
Species: Clostridium sp. CAG:299 (100%)
4 5496 bp 52.17 47.43 85.32
L2_039_239G1_scaffold_4374
Species: Clostridium sp. CAG:299 (100%)
3 3283 bp 50.93 47.33 92.66
L2_039_239G1_scaffold_1653
Species: Clostridium sp. CAG:299 (100%)
11 8846 bp 52.75 46.95 86.21
L2_039_239G1_scaffold_557
Species: Clostridium sp. CAG:299 (96.43%)
28 28965 bp 47.73 46.83 87.77
L2_039_239G1_scaffold_736
Species: Clostridium sp. CAG:299 (89.47%)
19 21748 bp 50.47 46.51 86.56
L2_039_239G1_scaffold_2878
Species: Clostridium sp. CAG:299 (60%)
5 4872 bp 53.35 46.03 93.78
L2_039_239G1_scaffold_511
Order: Clostridiales (80%)
25 31338 bp 49.15 45.98 89.94
L2_039_239G1_scaffold_1281
Genus: Clostridium (53.85%)
13 12025 bp 47.87 45.77 86.42
L2_039_239G1_scaffold_527
Species: Clostridium sp. CAG:299 (96.67%)
30 30465 bp 50.91 45.53 86.34
L2_039_239G1_scaffold_342
Species: Clostridium sp. CAG:299 (75%)
44 45203 bp 50.15 45.34 85.67
L2_039_239G1_scaffold_499
Species: Clostridium sp. CAG:299 (72.41%)
29 32469 bp 45.23 45.08 91.82
L2_039_239G1_scaffold_882
Species: Clostridium sp. CAG:299 (75%)
16 18092 bp 50.80 44.86 84.53
L2_039_239G1_scaffold_1230
Species: Clostridium sp. CAG:299 (70%)
10 12387 bp 46.16 44.84 76.92
L2_039_239G1_scaffold_158
Species: Clostridium sp. CAG:299 (69.15%)
94 81400 bp 49.43 44.75 89.73
L2_039_239G1_scaffold_244
Species: Clostridium sp. CAG:299 (81.13%)
53 58963 bp 50.19 44.53 88.89
L2_039_239G1_scaffold_541
Species: Clostridium sp. CAG:299 (64%)
25 29633 bp 50.13 44.53 88.04
L2_039_239G1_scaffold_1349
Genus: Clostridium (66.67%)
9 11263 bp 44.91 44.04 79.53
L2_039_239G1_scaffold_272
Species: Clostridium sp. CAG:299 (89.47%)
57 53039 bp 52.77 43.86 88.75
L2_039_239G1_scaffold_576
Species: Clostridium sp. CAG:299 (84.62%)
26 27840 bp 52.71 43.76 92.91
L2_039_239G1_scaffold_610
Species: Clostridium sp. CAG:299 (83.87%)
31 26273 bp 46.93 43.37 87.84
L2_039_239G1_scaffold_1687
Species: Clostridium sp. CAG:299 (71.43%)
7 8638 bp 50.67 43.13 86.03
L2_039_239G1_scaffold_608
Order: Clostridiales (100%)
26 27236 bp 45.89 43.09 89.79
L2_039_239G1_scaffold_1046
Genus: Clostridium (63.16%)
19 15059 bp 48.64 42.91 87.04
L2_039_239G1_scaffold_1479
Species: Clostridium sp. CAG:299 (77.78%)
9 10068 bp 49.87 42.88 91.27
L2_039_239G1_scaffold_530
Species: Clostridium sp. CAG:299 (67.86%)
28 31287 bp 50.58 42.28 88.39
L2_039_239G1_scaffold_631
Species: Clostridium sp. CAG:299 (65.63%)
32 43580 bp 48.46 41.97 85.21
L2_039_239G1_scaffold_1086
Species: Clostridium sp. CAG:299 (82.35%)
17 14523 bp 49.87 41.92 83.72
L2_039_239G1_scaffold_432
Species: Clostridium sp. CAG:299 (75.68%)
37 36029 bp 51.06 41.83 89.94
L2_039_239G1_scaffold_318
Species: Clostridium sp. CAG:299 (87.8%)
41 47349 bp 50.57 41.77 87.51
L2_039_239G1_scaffold_1087
Species: Clostridium sp. CAG:299 (70%)
10 14523 bp 46.97 41.45 90.87
L2_039_239G1_scaffold_4166
Species: Clostridium sp. CAG:299 (100%)
3 3425 bp 49.43 41.34 80.67
L2_039_239G1_scaffold_1048
Species: Clostridium sp. CAG:299 (73.33%)
15 15009 bp 50.15 41.32 89.13
L2_039_239G1_scaffold_654
Species: Clostridium sp. CAG:299 (81.25%)
32 24387 bp 47.46 40.82 93.64
L2_039_239G1_scaffold_151
Species: Clostridium sp. CAG:299 (68.42%)
76 84056 bp 49.45 40.36 89.37
L2_039_239G1_scaffold_330
Species: Clostridium sp. CAG:299 (77.5%)
40 46219 bp 50.92 39.69 90.02
L2_039_239G1_scaffold_830
Species: Clostridium sp. CAG:299 (63.64%)
11 19065 bp 48.33 39.32 89.32
L2_039_239G1_scaffold_50
Genus: Clostridium (63.51%)
148 144656 bp 49.21 38.92 90.78
L2_039_239G1_scaffold_155
Species: Clostridium sp. CAG:299 (76.12%)
67 81836 bp 49.17 38.26 89.81
L2_039_239G1_scaffold_1182
Species: Clostridium sp. CAG:299 (85.71%)
7 13039 bp 47.52 36.61 98.84
L2_039_239G1_scaffold_513
Genus: Clostridium (68.57%)
35 33036 bp 45.66 36.59 87.20
L2_039_239G1_scaffold_458
Species: Clostridium sp. CAG:299 (93.1%)
29 34586 bp 49.51 36.43 90.37
L2_039_239G1_scaffold_290
Species: Clostridium sp. CAG:299 (92.68%)
41 50748 bp 49.13 36.38 85.89
L2_039_239G1_scaffold_278
Species: Clostridium sp. CAG:299 (54.17%)
48 51727 bp 49.05 36.34 88.45
Displaying items 1-50 of 97 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.