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SR-VP_26_10_2020_1_100CM_Methanoperedens_43_19

SR-VP_26_10_2020_1_100CM_unknown_43_19

Consensus taxonomy:

Description

From SRVP2_maxbin_scaffolds2bin_tsv_301 (J)

Displaying items 101-150 of 200 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SR-VP_26_10_2020_1_100CM_scaffold_871728
Species: Candidatus Methanoperedens nitroreducens (66.67%)
3 4304 bp 41.87 18.82 85.87
SR-VP_26_10_2020_1_100CM_scaffold_1479803
Phylum: Euryarchaeota (51.61%)
31 35185 bp 41.70 19.28 85.85
SR-VP_26_10_2020_1_100CM_scaffold_5815728 32 29111 bp 43.92 18.87 85.85
SR-VP_26_10_2020_1_100CM_scaffold_5102613
Species: Candidatus Methanoperedens nitroreducens (50%)
4 3231 bp 45.09 20.12 85.79
SR-VP_26_10_2020_1_100CM_scaffold_3609129 57 46630 bp 43.27 19.47 85.74
SR-VP_26_10_2020_1_100CM_scaffold_4724159 11 10639 bp 41.79 17.86 85.55
SR-VP_26_10_2020_1_100CM_scaffold_3833412 22 17841 bp 43.66 20.44 85.49
SR-VP_26_10_2020_1_100CM_scaffold_6017556 42 33179 bp 41.57 18.51 85.45
SR-VP_26_10_2020_1_100CM_scaffold_1903088
Order: Methanosarcinales (64.29%)
14 11359 bp 40.12 16.53 85.39
SR-VP_26_10_2020_1_100CM_scaffold_5713033 12 10292 bp 42.38 19.46 85.29
SR-VP_26_10_2020_1_100CM_scaffold_3786186 24 21773 bp 40.53 18.88 85.23
SR-VP_26_10_2020_1_100CM_scaffold_3829373 6 4437 bp 44.31 20.40 85.19
SR-VP_26_10_2020_1_100CM_scaffold_3788766
Species: Candidatus Methanoperedens nitroreducens (50%)
22 16760 bp 42.97 17.26 85.10
SR-VP_26_10_2020_1_100CM_scaffold_884323 32 31446 bp 41.74 18.96 85.09
SR-VP_26_10_2020_1_100CM_scaffold_3354307 11 13752 bp 44.47 19.36 85.06
SR-VP_26_10_2020_1_100CM_scaffold_591996
Species: Candidatus Methanoperedens nitroreducens (75%)
4 3598 bp 44.36 15.63 85.05
SR-VP_26_10_2020_1_100CM_scaffold_4716741 9 5884 bp 39.97 16.02 84.89
SR-VP_26_10_2020_1_100CM_scaffold_6690094
Species: Candidatus Methanoperedens nitroreducens (50%)
4 4217 bp 40.38 21.16 84.87
SR-VP_26_10_2020_1_100CM_scaffold_1833135
Class: Methanomicrobia (80%)
5 4471 bp 42.65 15.54 84.81
SR-VP_26_10_2020_1_100CM_scaffold_90940 9 8392 bp 42.96 18.92 84.72
SR-VP_26_10_2020_1_100CM_scaffold_5165317
Species: Candidatus Methanoperedens nitroreducens (76.92%)
13 9476 bp 40.62 20.31 84.66
SR-VP_26_10_2020_1_100CM_scaffold_4392652 8 6890 bp 44.82 20.61 84.64
SR-VP_26_10_2020_1_100CM_scaffold_924603
Order: Methanosarcinales (50%)
24 27747 bp 43.00 19.39 84.37
SR-VP_26_10_2020_1_100CM_scaffold_6472139 17 15808 bp 42.54 18.03 84.36
SR-VP_26_10_2020_1_100CM_scaffold_2072668 21 18405 bp 41.83 19.87 84.29
SR-VP_26_10_2020_1_100CM_scaffold_1783633
Domain: Archaea (57.14%)
7 6372 bp 42.86 18.75 84.28
SR-VP_26_10_2020_1_100CM_scaffold_6691160 17 15884 bp 43.53 19.49 84.18
SR-VP_26_10_2020_1_100CM_scaffold_2381079 38 41533 bp 41.58 18.48 84.18
SR-VP_26_10_2020_1_100CM_scaffold_2174439 26 22618 bp 43.19 18.99 84.03
SR-VP_26_10_2020_1_100CM_scaffold_706593 37 30285 bp 41.32 19.89 83.84
SR-VP_26_10_2020_1_100CM_scaffold_6816321
Order: Methanosarcinales (66.67%)
6 4834 bp 43.50 18.20 83.72
SR-VP_26_10_2020_1_100CM_scaffold_560262 30 33507 bp 42.02 17.41 83.62
SR-VP_26_10_2020_1_100CM_scaffold_908550
Domain: Archaea (54.55%)
11 7597 bp 43.40 18.95 83.20
SR-VP_26_10_2020_1_100CM_scaffold_4192145 15 14319 bp 41.66 18.19 83.11
SR-VP_26_10_2020_1_100CM_scaffold_6214294
Species: Candidatus Methanoperedens nitroreducens (66.67%)
6 4103 bp 44.92 20.59 82.99
SR-VP_26_10_2020_1_100CM_scaffold_883334 10 10510 bp 44.65 18.20 82.98
SR-VP_26_10_2020_1_100CM_scaffold_6215047 3 2589 bp 41.71 18.35 82.73
SR-VP_26_10_2020_1_100CM_scaffold_5942934 43 34948 bp 42.75 18.40 82.54
SR-VP_26_10_2020_1_100CM_scaffold_355570
Order: Methanosarcinales (87.5%)
8 6978 bp 41.70 17.45 82.24
SR-VP_26_10_2020_1_100CM_scaffold_6845056 10 10408 bp 44.19 18.11 82.06
SR-VP_26_10_2020_1_100CM_scaffold_198826 10 8435 bp 41.71 17.49 82.05
SR-VP_26_10_2020_1_100CM_scaffold_4968634
Phylum: Euryarchaeota (57.14%)
7 6860 bp 43.44 21.32 81.95
SR-VP_26_10_2020_1_100CM_scaffold_4711106
Order: Methanosarcinales (50%)
8 10530 bp 41.42 17.33 81.91
SR-VP_26_10_2020_1_100CM_scaffold_2225972 9 7552 bp 43.01 18.77 81.67
SR-VP_26_10_2020_1_100CM_scaffold_130782
Order: Methanosarcinales (50%)
18 13352 bp 44.60 20.48 81.58
SR-VP_26_10_2020_1_100CM_scaffold_4627366
Species: Candidatus Methanoperedens nitroreducens (50%)
12 8624 bp 39.94 17.97 81.51
SR-VP_26_10_2020_1_100CM_scaffold_3901495 4 2677 bp 44.86 19.24 81.36
SR-VP_26_10_2020_1_100CM_scaffold_573541 18 12837 bp 44.33 21.38 81.14
SR-VP_26_10_2020_1_100CM_scaffold_4198396
Species: Candidatus Methanoperedens nitroreducens (50%)
6 3388 bp 42.44 18.30 81.02
SR-VP_26_10_2020_1_100CM_scaffold_4316160 17 10554 bp 42.85 20.06 80.97
Displaying items 101-150 of 200 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.