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SR-VP_26_10_2020_1_100CM_Methanoperedens_43_19

SR-VP_26_10_2020_1_100CM_unknown_43_19

Consensus taxonomy:

Description

From SRVP2_maxbin_scaffolds2bin_tsv_301 (J)

Displaying items 51-100 of 200 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SR-VP_26_10_2020_1_100CM_scaffold_4038482
Species: Candidatus Methanoperedens nitroreducens (60%)
5 3257 bp 45.29 20.03 89.07
SR-VP_26_10_2020_1_100CM_scaffold_4937097
Species: Candidatus Methanoperedens nitroreducens (62.5%)
8 4862 bp 43.21 18.82 88.98
SR-VP_26_10_2020_1_100CM_scaffold_676831
Species: Candidatus Methanoperedens nitroreducens (60%)
5 6930 bp 42.29 18.87 88.96
SR-VP_26_10_2020_1_100CM_scaffold_5084452
Species: Candidatus Methanoperedens nitroreducens (60%)
5 3095 bp 41.91 16.96 88.89
SR-VP_26_10_2020_1_100CM_scaffold_2884987 11 8205 bp 42.63 16.88 88.85
SR-VP_26_10_2020_1_100CM_scaffold_3544416 9 8770 bp 40.43 17.99 88.70
SR-VP_26_10_2020_1_100CM_scaffold_1188173 30 25843 bp 43.21 19.58 88.50
SR-VP_26_10_2020_1_100CM_scaffold_4996749 26 26257 bp 40.95 17.57 88.23
SR-VP_26_10_2020_1_100CM_scaffold_1853328 17 13062 bp 42.86 18.45 88.19
SR-VP_26_10_2020_1_100CM_scaffold_3646183
Order: Methanosarcinales (80%)
5 4117 bp 43.82 20.83 88.17
SR-VP_26_10_2020_1_100CM_scaffold_2618058 24 25314 bp 43.47 17.61 88.16
SR-VP_26_10_2020_1_100CM_scaffold_5093905 9 8269 bp 44.71 18.05 88.02
SR-VP_26_10_2020_1_100CM_scaffold_2951849 18 13493 bp 42.44 19.14 87.88
SR-VP_26_10_2020_1_100CM_scaffold_5897496 28 25082 bp 42.09 18.74 87.82
SR-VP_26_10_2020_1_100CM_scaffold_3163803 21 20538 bp 42.84 17.99 87.77
SR-VP_26_10_2020_1_100CM_scaffold_5548966
Species: Candidatus Methanoperedens nitroreducens (100%)
4 4478 bp 43.57 20.49 87.70
SR-VP_26_10_2020_1_100CM_scaffold_5150372
Species: Candidatus Methanoperedens nitroreducens (90.91%)
11 8023 bp 44.38 21.22 87.61
SR-VP_26_10_2020_1_100CM_scaffold_3512407 3 3915 bp 45.11 18.33 87.59
SR-VP_26_10_2020_1_100CM_scaffold_2174667 20 20382 bp 41.65 18.52 87.46
SR-VP_26_10_2020_1_100CM_scaffold_1423571 17 11307 bp 45.05 20.45 87.45
SR-VP_26_10_2020_1_100CM_scaffold_687590 11 8695 bp 42.07 18.43 87.43
SR-VP_26_10_2020_1_100CM_scaffold_938766 20 22823 bp 40.62 17.89 87.39
SR-VP_26_10_2020_1_100CM_scaffold_5827339 17 14353 bp 43.02 19.19 87.39
SR-VP_26_10_2020_1_100CM_scaffold_1221712 36 25975 bp 42.45 19.42 87.33
SR-VP_26_10_2020_1_100CM_scaffold_5046718 23 20211 bp 43.31 19.44 87.32
SR-VP_26_10_2020_1_100CM_scaffold_575579 14 13374 bp 42.69 18.58 87.27
SR-VP_26_10_2020_1_100CM_scaffold_172494 37 28856 bp 43.57 18.60 87.25
SR-VP_26_10_2020_1_100CM_scaffold_5723304 22 15161 bp 42.47 18.40 87.24
SR-VP_26_10_2020_1_100CM_scaffold_6736184 7 5626 bp 44.86 19.20 87.24
SR-VP_26_10_2020_1_100CM_scaffold_6523803 6 4210 bp 44.73 20.19 87.05
SR-VP_26_10_2020_1_100CM_scaffold_1745493 9 5130 bp 43.49 17.88 87.02
SR-VP_26_10_2020_1_100CM_scaffold_3695492 11 7044 bp 40.87 19.27 86.97
SR-VP_26_10_2020_1_100CM_scaffold_5625425 43 36658 bp 42.90 19.20 86.96
SR-VP_26_10_2020_1_100CM_scaffold_6206255 38 34116 bp 42.38 18.78 86.90
SR-VP_26_10_2020_1_100CM_scaffold_942502 28 24584 bp 42.79 18.12 86.62
SR-VP_26_10_2020_1_100CM_scaffold_3516173 6 5203 bp 43.82 18.11 86.60
SR-VP_26_10_2020_1_100CM_scaffold_1635010 30 28390 bp 43.88 18.82 86.59
SR-VP_26_10_2020_1_100CM_scaffold_3242024 31 28044 bp 41.65 20.16 86.57
SR-VP_26_10_2020_1_100CM_scaffold_5339230
Species: Candidatus Methanoperedens nitroreducens (58.33%)
12 8558 bp 40.54 17.53 86.48
SR-VP_26_10_2020_1_100CM_scaffold_4631042
Species: Candidatus Methanoperedens nitroreducens (50%)
6 3699 bp 43.44 19.60 86.46
SR-VP_26_10_2020_1_100CM_scaffold_2831433 5 3226 bp 44.36 16.04 86.45
SR-VP_26_10_2020_1_100CM_scaffold_6797892 57 53158 bp 41.26 19.81 86.41
SR-VP_26_10_2020_1_100CM_scaffold_4089572 5 3438 bp 43.11 16.43 86.39
SR-VP_26_10_2020_1_100CM_scaffold_6502185 37 27813 bp 42.44 19.62 86.18
SR-VP_26_10_2020_1_100CM_scaffold_3327757
Phylum: Euryarchaeota (53.33%)
15 14890 bp 41.46 19.58 86.17
SR-VP_26_10_2020_1_100CM_scaffold_2905347
Species: Candidatus Methanoperedens nitroreducens (66.67%)
9 6548 bp 44.46 19.89 86.13
SR-VP_26_10_2020_1_100CM_scaffold_1747122 35 34985 bp 43.42 18.75 86.06
SR-VP_26_10_2020_1_100CM_scaffold_345351 17 14372 bp 42.50 19.20 85.96
SR-VP_26_10_2020_1_100CM_scaffold_5955864
Species: Candidatus Methanoperedens nitroreducens (50%)
10 6219 bp 43.75 20.58 85.91
SR-VP_26_10_2020_1_100CM_scaffold_6981401 42 38149 bp 42.35 19.83 85.87
Displaying items 51-100 of 200 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.