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NECEvent2014_4_5_Clostridium_butyricum_28_20

NECEvent2014_4_5_Clostridium_butyricum_29_21
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium butyricum  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 101-150 of 227 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_1410 174_005_scaffold_1410
Species: Clostridium sp. IBUN125C (75%)
4 4765 bp 26.93 18.01 85.62
NECEvent2014_4_5_scaffold_971 174_005_scaffold_971
Genus: Clostridium (100%)
9 7963 bp 26.85 15.99 85.71
NECEvent2014_4_5_scaffold_101 174_005_scaffold_101
Species: Clostridium butyricum (61.54%)
39 44488 bp 28.74 22.11 85.72
NECEvent2014_4_5_scaffold_32 174_005_scaffold_32
Genus: Clostridium (90%)
70 71518 bp 28.55 22.89 85.73
NECEvent2014_4_5_scaffold_338 174_005_scaffold_338
Genus: Clostridium (95.24%)
21 21252 bp 27.30 17.91 85.74
NECEvent2014_4_5_scaffold_100 174_005_scaffold_100
Species: Clostridium butyricum (51.11%)
45 45086 bp 28.23 18.85 85.88
NECEvent2014_4_5_scaffold_1732 174_005_scaffold_1732
Species: Clostridium sp. IBUN125C (50%)
2 3597 bp 28.52 19.35 85.99
NECEvent2014_4_5_scaffold_748 174_005_scaffold_748
Species: Clostridium butyricum (55.56%)
9 10639 bp 28.87 17.86 86.00
NECEvent2014_4_5_scaffold_496 174_005_scaffold_496
Genus: Clostridium (77.78%)
18 15269 bp 29.08 25.00 86.05
NECEvent2014_4_5_scaffold_360 174_005_scaffold_360
Species: Clostridium butyricum (76.47%)
17 20268 bp 29.10 17.16 86.09
NECEvent2014_4_5_scaffold_3410 174_005_scaffold_3410
Species: Clostridium butyricum (100%)
3 1365 bp 28.94 38.02 86.15
NECEvent2014_4_5_scaffold_168 174_005_scaffold_168
Genus: Clostridium (100%)
25 34772 bp 29.12 19.53 86.17
NECEvent2014_4_5_scaffold_1526 174_005_scaffold_1526
Species: Clostridium butyricum (75%)
4 4284 bp 25.70 14.81 86.27
NECEvent2014_4_5_scaffold_52 174_005_scaffold_52
Genus: Clostridium (100%)
50 61115 bp 28.40 20.75 86.34
NECEvent2014_4_5_scaffold_930 174_005_scaffold_930
Species: Clostridium sp. IBUN125C (50%)
10 8350 bp 26.93 15.72 86.37
NECEvent2014_4_5_scaffold_763 174_005_scaffold_763
Species: Clostridium butyricum (60%)
10 10518 bp 28.65 21.28 86.39
NECEvent2014_4_5_scaffold_1270 174_005_scaffold_1270
Genus: Clostridium (60%)
5 5522 bp 27.96 16.73 86.44
NECEvent2014_4_5_scaffold_326 174_005_scaffold_326
Species: Clostridium butyricum (57.89%)
19 21791 bp 29.01 20.76 86.53
NECEvent2014_4_5_scaffold_512 174_005_scaffold_512
Genus: Clostridium (66.67%)
15 14860 bp 30.33 26.42 86.56
NECEvent2014_4_5_scaffold_686 174_005_scaffold_686
Species: Clostridium butyricum (55.56%)
9 11488 bp 29.13 24.53 86.62
NECEvent2014_4_5_scaffold_64 174_005_scaffold_64
Species: Clostridium butyricum (62.75%)
51 53997 bp 28.62 18.96 86.64
NECEvent2014_4_5_scaffold_91 174_005_scaffold_91
Species: Clostridium butyricum (55.56%)
36 47046 bp 27.60 16.75 86.65
NECEvent2014_4_5_scaffold_309 174_005_scaffold_309
Species: Clostridium butyricum (75%)
16 22843 bp 26.79 18.04 86.65
NECEvent2014_4_5_scaffold_137 174_005_scaffold_137
Genus: Clostridium (100%)
33 38325 bp 28.13 19.44 86.73
NECEvent2014_4_5_scaffold_22 174_005_scaffold_22
Species: Clostridium butyricum (57.14%)
63 77137 bp 28.58 19.10 86.76
NECEvent2014_4_5_scaffold_212 174_005_scaffold_212
Species: Clostridium butyricum (52%)
25 30682 bp 28.93 20.88 86.79
NECEvent2014_4_5_scaffold_177 174_005_scaffold_177
Genus: Clostridium (78.13%)
32 33896 bp 28.07 23.28 86.83
NECEvent2014_4_5_scaffold_274 174_005_scaffold_274
Genus: Clostridium (91.67%)
24 24831 bp 29.18 18.59 86.83
NECEvent2014_4_5_scaffold_57 174_005_scaffold_57
Species: Clostridium butyricum (55.81%)
43 56054 bp 28.98 22.99 86.84
NECEvent2014_4_5_scaffold_146 174_005_scaffold_146
Species: Clostridium butyricum (80.77%)
26 37247 bp 28.82 20.51 86.86
NECEvent2014_4_5_scaffold_787 174_005_scaffold_787
Species: Clostridium butyricum (77.78%)
9 10117 bp 27.95 15.69 86.91
NECEvent2014_4_5_scaffold_307 174_005_scaffold_307
Species: Clostridium butyricum (52.94%)
17 22935 bp 27.78 17.98 86.92
NECEvent2014_4_5_scaffold_851 174_005_scaffold_851
Species: Clostridium butyricum (50%)
12 9280 bp 28.18 17.81 86.93
NECEvent2014_4_5_scaffold_528 174_005_scaffold_528
Genus: Clostridium (85.71%)
14 14516 bp 28.27 21.29 86.97
NECEvent2014_4_5_scaffold_34 174_005_scaffold_34
Species: Clostridium butyricum (74.6%)
63 70055 bp 28.28 19.64 87.14
NECEvent2014_4_5_scaffold_216 174_005_scaffold_216
Species: Clostridium sp. IBUN125C (52%)
25 30335 bp 28.29 19.67 87.19
NECEvent2014_4_5_scaffold_302 174_005_scaffold_302
Species: Clostridium butyricum (73.91%)
23 23123 bp 27.42 20.34 87.19
NECEvent2014_4_5_scaffold_200 174_005_scaffold_200
Species: Clostridium butyricum (66.67%)
30 31891 bp 29.15 20.82 87.27
NECEvent2014_4_5_scaffold_328 174_005_scaffold_328
Species: Clostridium butyricum (52.38%)
21 21629 bp 28.73 19.62 87.30
NECEvent2014_4_5_scaffold_280 174_005_scaffold_280
Species: Clostridium sp. IBUN125C (60%)
20 24624 bp 26.17 19.72 87.40
NECEvent2014_4_5_scaffold_899 174_005_scaffold_899
Species: Clostridium butyricum (66.67%)
6 8669 bp 27.58 18.69 87.41
NECEvent2014_4_5_scaffold_119 174_005_scaffold_119
Genus: Clostridium (100%)
31 40925 bp 29.08 18.57 87.44
NECEvent2014_4_5_scaffold_187 174_005_scaffold_187
Genus: Clostridium (100%)
29 32454 bp 28.43 20.00 87.49
NECEvent2014_4_5_scaffold_1103 174_005_scaffold_1103
Species: Clostridium sp. IBUN125C (60%)
5 6626 bp 28.31 19.36 87.56
NECEvent2014_4_5_scaffold_48 174_005_scaffold_48
Species: Clostridium butyricum (54.84%)
62 62625 bp 29.53 20.69 87.65
NECEvent2014_4_5_scaffold_331 174_005_scaffold_331
Genus: Clostridium (100%)
17 21527 bp 28.21 18.68 87.81
NECEvent2014_4_5_scaffold_118 174_005_scaffold_118
Genus: Clostridium (94.44%)
36 41346 bp 29.46 21.09 87.93
NECEvent2014_4_5_scaffold_21 174_005_scaffold_21
Species: Clostridium butyricum (50.68%)
73 78187 bp 29.56 24.92 87.95
NECEvent2014_4_5_scaffold_384 174_005_scaffold_384
Species: Clostridium butyricum (88.89%)
18 19289 bp 29.29 25.55 87.95
NECEvent2014_4_5_scaffold_699 174_005_scaffold_699
Species: Clostridium butyricum (90.91%)
11 11309 bp 26.69 17.14 88.10
Displaying items 101-150 of 227 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.