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SCN18_26_2_15_R5_B_Alphaproteobacteria_66_27

In projects: SCN18_26_2_15_R5_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

SCN18_26_2_15_R5_B_metabat2_012

Displaying items 401-445 of 445 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_26_2_15_R5_B_scaffold_1184
Class: Alphaproteobacteria (50%)
10 11703 bp 66.53 28.83 95.67
SCN18_26_2_15_R5_B_scaffold_2015
Class: Alphaproteobacteria (100%)
5 7207 bp 66.32 28.85 89.54
SCN18_26_2_15_R5_B_scaffold_228
Phylum: Proteobacteria (83.33%)
60 63280 bp 64.44 28.85 93.11
SCN18_26_2_15_R5_B_scaffold_604
Class: Alphaproteobacteria (68.18%)
22 23408 bp 65.00 28.85 93.98
SCN18_26_2_15_R5_B_scaffold_334
Class: Alphaproteobacteria (58.14%)
43 44840 bp 63.82 28.87 86.23
SCN18_26_2_15_R5_B_scaffold_2036
Species: SCNPILOT_SOLID2_TRIM150_Afipia_61_20 (60%)
5 7137 bp 65.66 28.88 98.32
SCN18_26_2_15_R5_B_scaffold_615
Class: Alphaproteobacteria (84%)
25 22872 bp 67.52 28.89 95.70
SCN18_26_2_15_R5_B_scaffold_1745
Class: Alphaproteobacteria (60%)
10 8091 bp 65.28 28.90 91.51
SCN18_26_2_15_R5_B_scaffold_2240
Class: Alphaproteobacteria (71.43%)
7 6545 bp 67.21 28.95 98.00
SCN18_26_2_15_R5_B_scaffold_928
Class: Alphaproteobacteria (50%)
16 14886 bp 65.68 28.97 90.93
SCN18_26_2_15_R5_B_scaffold_448
Class: Alphaproteobacteria (86.67%)
30 32702 bp 66.42 28.97 92.72
SCN18_26_2_15_R5_B_scaffold_1046
Class: Alphaproteobacteria (66.67%)
12 13177 bp 65.77 28.97 93.66
SCN18_26_2_15_R5_B_scaffold_1143
Phylum: Proteobacteria (92.31%)
13 12098 bp 65.43 28.98 93.07
SCN18_26_2_15_R5_B_scaffold_1179
Species: SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 (62.5%)
8 11781 bp 66.56 28.98 98.09
SCN18_26_2_15_R5_B_scaffold_1317
Class: Alphaproteobacteria (55.56%)
9 10437 bp 64.79 28.99 96.00
SCN18_26_2_15_R5_B_scaffold_704
Class: Alphaproteobacteria (70.83%)
24 20125 bp 66.59 29.03 94.06
SCN18_26_2_15_R5_B_scaffold_107
Class: Alphaproteobacteria (61.65%)
133 136923 bp 63.60 29.03 88.54
SCN18_26_2_15_R5_B_scaffold_371
Phylum: Proteobacteria (79.41%)
34 39606 bp 66.78 29.05 93.74
SCN18_26_2_15_R5_B_scaffold_511
Class: Alphaproteobacteria (86.67%)
30 28036 bp 67.38 29.06 93.49
SCN18_26_2_15_R5_B_scaffold_1518
Phylum: Proteobacteria (69.23%)
13 16490 bp 62.72 29.07 75.14
SCN18_26_2_15_R5_B_scaffold_5701
Order: Rhizobiales (66.67%)
3 3003 bp 65.00 29.12 84.52
SCN18_26_2_15_R5_B_scaffold_547
Order: Rhodospirillales (54.17%)
24 26142 bp 65.82 29.13 91.92
SCN18_26_2_15_R5_B_scaffold_1136
Order: Rhizobiales (66.67%)
12 12166 bp 67.68 29.18 97.80
SCN18_26_2_15_R5_B_scaffold_855
Class: Alphaproteobacteria (57.14%)
14 16264 bp 65.46 29.18 93.26
SCN18_26_2_15_R5_B_scaffold_399
Class: Alphaproteobacteria (51.72%)
29 36500 bp 64.19 29.20 93.16
SCN18_26_2_15_R5_B_scaffold_296
Class: Alphaproteobacteria (57.41%)
54 49952 bp 66.64 29.21 94.10
SCN18_26_2_15_R5_B_scaffold_2076
Class: Alphaproteobacteria (66.67%)
3 7046 bp 65.43 29.23 95.54
SCN18_26_2_15_R5_B_scaffold_219
Class: Alphaproteobacteria (68.18%)
66 66520 bp 66.45 29.26 94.18
SCN18_26_2_15_R5_B_scaffold_273
Class: Alphaproteobacteria (75.93%)
54 54364 bp 66.07 29.30 92.37
SCN18_26_2_15_R5_B_scaffold_382
Class: Alphaproteobacteria (62.86%)
35 38146 bp 67.03 29.30 93.93
SCN18_26_2_15_R5_B_scaffold_825
Class: Alphaproteobacteria (73.33%)
15 17108 bp 64.62 29.32 90.31
SCN18_26_2_15_R5_B_scaffold_405
Class: Alphaproteobacteria (59.26%)
27 35611 bp 66.37 29.34 94.24
SCN18_26_2_15_R5_B_scaffold_635
Class: Alphaproteobacteria (77.27%)
22 22114 bp 65.90 29.43 90.53
SCN18_26_2_15_R5_B_scaffold_639
Phylum: Proteobacteria (82.35%)
17 21920 bp 67.77 29.44 96.47
SCN18_26_2_15_R5_B_scaffold_1380
Class: Alphaproteobacteria (80%)
10 9983 bp 65.92 29.45 96.25
SCN18_26_2_15_R5_B_scaffold_3689
Order: Rhizobiales (50%)
6 4308 bp 68.18 29.56 91.85
SCN18_26_2_15_R5_B_scaffold_1472
Class: Alphaproteobacteria (50%)
6 9381 bp 66.56 29.66 91.59
SCN18_26_2_15_R5_B_scaffold_685
Class: Alphaproteobacteria (64.71%)
17 20594 bp 64.63 29.67 95.29
SCN18_26_2_15_R5_B_scaffold_659
Species: CN-SCN_Devosia_27x (92.86%)
14 21433 bp 66.03 29.86 94.98
SCN18_26_2_15_R5_B_scaffold_3350
Species: Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120 (100%)
2 4654 bp 69.64 30.04 100.04
SCN18_26_2_15_R5_B_scaffold_662
Species: CN-SCN_Devosia_27x (100%)
9 21392 bp 65.68 30.45 95.62
SCN18_26_2_15_R5_B_scaffold_1699
Order: Rhodospirillales (57.14%)
7 8275 bp 67.52 30.98 97.60
SCN18_26_2_15_R5_B_scaffold_3574
Class: Alphaproteobacteria (50%)
6 4414 bp 57.05 31.09 58.65
SCN18_26_2_15_R5_B_scaffold_4458
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
1 3652 bp 66.07 32.69 99.97
SCN18_26_2_15_R5_B_scaffold_11599
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (50%)
2 1573 bp 65.10 36.71 99.17
Displaying items 401-445 of 445 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.