ggKbase home page
Advanced Search
Search Help

CN-SCN_Phenylobacterium_14x

CN-SCN_Caulobacterales_69_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.94 Longest contig: 40.95 Kbp Bin length: 2.69 Mbp GC content: 69.19 %
Contigs count: 245 Features count: 2861 rRNAs count: 0 tRNAs count: 30

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38

Description

Partial 44

Displaying items 101-150 of 245 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_3519 PHE14_29
Species: Phenylobacterium zucineum (58.62%)
29 29261 bp 68.01 13.86 95.25
cn_combo_scaffold_3579 PHE14_31
Order: Caulobacterales (60%)
15 16062 bp 68.30 13.87 89.71
cn_combo_scaffold_5310 PHE14_61
Order: Caulobacterales (90%)
10 11136 bp 68.01 13.89 89.47
cn_combo_scaffold_11610 PHE14_240
Species: R_Phenylobacterium_69_31 (50%)
8 5484 bp 71.28 13.89 89.72
cn_combo_scaffold_2727 PHE14_20
Genus: Caulobacter (50%)
20 20527 bp 68.97 13.90 92.13
cn_combo_scaffold_11825 PHE14_204
Species: Phenylobacterium zucineum (60%)
5 5389 bp 68.88 13.92 95.47
cn_combo_scaffold_2461 PHE14_14
Order: Caulobacterales (90.91%)
22 22403 bp 69.90 13.92 93.91
cn_combo_scaffold_4069 PHE14_35
Species: Phenylobacterium zucineum (53.33%)
15 14375 bp 69.79 13.93 91.41
cn_combo_scaffold_9576 PHE14_153
Species: R_Phenylobacterium_70_10 (50%)
8 6572 bp 69.80 13.94 90.43
cn_combo_scaffold_1425 PHE14_2
Order: Caulobacterales (76.47%)
34 36230 bp 69.17 13.94 88.47
cn_combo_scaffold_3681 PHE14_32
Order: Caulobacterales (85.19%)
27 25969 bp 69.94 13.94 94.35
cn_combo_scaffold_9012 PHE14_146
Order: Xanthomonadales (80%)
5 6980 bp 68.84 13.95 92.28
cn_combo_scaffold_3390 PHE14_27
Species: R_Phenylobacterium_70_10 (53.13%)
32 26109 bp 69.71 13.96 90.90
cn_combo_scaffold_7147 PHE14_234
Class: Alphaproteobacteria (87.5%)
8 8554 bp 68.96 13.97 95.22
cn_combo_scaffold_9895 PHE14_163
Species: Phenylobacterium zucineum (50%)
4 6382 bp 69.60 13.99 92.32
cn_combo_scaffold_8742 PHE14_137
Order: Caulobacterales (100%)
10 11944 bp 69.65 14.02 83.82
cn_combo_scaffold_9729 PHE14_158
Order: Caulobacterales (60%)
5 6482 bp 70.84 14.02 89.79
cn_combo_scaffold_6696 PHE14_233
Order: Caulobacterales (50%)
8 9089 bp 68.98 14.02 89.25
cn_combo_scaffold_5794 PHE14_72
Species: R_Phenylobacterium_70_10 (63.64%)
11 10324 bp 70.56 14.02 93.05
cn_combo_scaffold_12774 PHE14_219
Order: Caulobacterales (60%)
5 5026 bp 68.44 14.03 91.98
cn_combo_scaffold_2644 PHE14_17
Order: Caulobacterales (82.35%)
17 21147 bp 68.16 14.03 90.44
cn_combo_scaffold_5883 PHE14_76
Species: Phenylobacterium zucineum (55.56%)
9 10177 bp 71.69 14.03 93.76
cn_combo_scaffold_5948 PHE14_79
Order: Caulobacterales (69.23%)
13 10074 bp 67.03 14.06 84.67
cn_combo_scaffold_11000 PHE14_187
Order: Caulobacterales (60%)
5 5766 bp 71.33 14.07 98.23
cn_combo_scaffold_4806 PHE14_54
Order: Caulobacterales (76.47%)
17 17690 bp 68.52 14.07 88.38
cn_combo_scaffold_5684 PHE14_69
Order: Caulobacterales (87.5%)
8 10498 bp 70.47 14.07 91.36
cn_combo_scaffold_8119 PHE14_131
Order: Caulobacterales (66.67%)
9 7660 bp 69.71 14.07 91.92
cn_combo_scaffold_9593 PHE14_154
Species: R_Phenylobacterium_69_31 (50%)
8 9550 bp 70.16 14.10 90.41
cn_combo_scaffold_2515 PHE14_15
Order: Caulobacterales (88.89%)
18 22006 bp 69.04 14.10 91.52
cn_combo_scaffold_3156 PHE14_24
Order: Caulobacterales (80%)
20 18085 bp 69.91 14.10 95.79
cn_combo_scaffold_12395 PHE14_215
Order: Caulobacterales (72.73%)
11 8930 bp 69.00 14.11 89.90
cn_combo_scaffold_8646 PHE14_238
Class: Alphaproteobacteria (53.85%)
13 7251 bp 69.59 14.12 84.57
cn_combo_scaffold_5902 PHE14_78
Order: Caulobacterales (100%)
8 10146 bp 69.99 14.13 94.50
cn_combo_scaffold_2859 PHE14_21
Order: Caulobacterales (78.95%)
19 19744 bp 70.12 14.14 93.40
cn_combo_scaffold_12165 PHE14_247
Class: Alphaproteobacteria (100%)
6 5247 bp 69.60 14.16 92.34
cn_combo_scaffold_3110 PHE14_23
Order: Caulobacterales (100%)
19 18322 bp 70.29 14.17 91.97
cn_combo_scaffold_4477 PHE14_44
Order: Caulobacterales (76%)
25 19388 bp 70.21 14.18 90.09
cn_combo_scaffold_7475 PHE14_118
Species: Phenylobacterium zucineum (54.55%)
11 8240 bp 69.93 14.22 92.18
cn_combo_scaffold_10402 PHE14_174
Species: R_Phenylobacterium_70_10 (50%)
6 6084 bp 69.51 14.23 91.32
cn_combo_scaffold_7880 PHE14_126
Genus: Caulobacter (54.55%)
11 7858 bp 71.29 14.23 89.26
cn_combo_scaffold_11982 PHE14_208
Order: Caulobacterales (70%)
10 8454 bp 69.77 14.24 92.80
cn_combo_scaffold_4507 PHE14_45
Species: Arenimonas composti (54.55%)
11 13025 bp 68.94 14.24 93.12
cn_combo_scaffold_5672 PHE14_68
Species: R_Phenylobacterium_69_31 (53.33%)
15 10513 bp 68.98 14.24 94.48
cn_combo_scaffold_6671 PHE14_101
Order: Caulobacterales (90.91%)
11 9116 bp 67.41 14.24 89.18
cn_combo_scaffold_4183 PHE14_36
Species: R_Phenylobacterium_70_10 (50%)
16 13984 bp 70.22 14.25 88.34
cn_combo_scaffold_6029 PHE14_84
Order: Caulobacterales (92.86%)
14 13386 bp 69.74 14.25 89.76
cn_combo_scaffold_8064 PHE14_130
Order: Caulobacterales (100%)
9 7712 bp 71.89 14.25 97.52
cn_combo_scaffold_12426 PHE14_216
Species: Sphingopyxis sp. LC81 (100%)
1 5153 bp 64.02 14.26 96.47
cn_combo_scaffold_5337 PHE14_62
Species: R_Phenylobacterium_69_31 (55.56%)
9 11082 bp 69.77 14.26 95.70
cn_combo_scaffold_6333 PHE14_93
Order: Caulobacterales (95.65%)
23 17939 bp 68.73 14.28 90.45
Displaying items 101-150 of 245 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.