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dasL3_133_000G1_concoct_15_fa

L3_133_000G1_public_Clostridiales_42_14
In projects: L3_133_000G1_public

Consensus taxonomy: Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Metagenomic Context

Parent: L3_133_000G1_public_UNK

Properties

Avg. coverage: 13.75 Longest contig: 213.94 Kbp Bin length: 7.12 Mbp GC content: 41.60 %
Contigs count: 134 Features count: 6075 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 14 / 38 MC: 1
Displaying items 1-50 of 134 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_133_000G1_scaffold_21
Order: Clostridiales (63.11%)
206 206787 bp 42.23 14.38 88.64
L3_133_000G1_scaffold_15
Order: Clostridiales (67.01%)
194 213938 bp 41.59 12.19 91.18
L3_133_000G1_scaffold_29
Order: Clostridiales (67.27%)
165 195528 bp 42.79 14.84 90.59
L3_133_000G1_scaffold_72
Phylum: Firmicutes (55.15%)
165 143411 bp 37.08 12.17 87.15
L3_133_000G1_scaffold_35
Order: Clostridiales (77.16%)
162 186359 bp 41.02 12.86 87.86
L3_133_000G1_scaffold_37
Order: Clostridiales (60.13%)
158 181976 bp 42.57 13.66 89.73
L3_133_000G1_scaffold_54
Order: Clostridiales (61.44%)
153 165346 bp 42.06 15.50 90.27
L3_133_000G1_scaffold_24
Order: Clostridiales (71.43%)
147 202308 bp 42.67 13.86 91.04
L3_133_000G1_scaffold_26
Order: Clostridiales (64.79%)
142 198831 bp 41.73 15.95 89.56
L3_133_000G1_scaffold_73
Order: Clostridiales (61.15%)
139 142999 bp 42.81 15.36 89.48
L3_133_000G1_scaffold_40
Order: Clostridiales (87.22%)
133 178677 bp 43.27 15.87 93.31
L3_133_000G1_scaffold_51
Order: Clostridiales (71.32%)
129 167115 bp 41.47 14.71 87.33
L3_133_000G1_scaffold_34
Order: Clostridiales (63.78%)
127 187250 bp 41.11 12.62 89.36
L3_133_000G1_scaffold_63
Order: Clostridiales (64.57%)
127 151786 bp 41.66 15.74 88.70
L3_133_000G1_scaffold_75
Order: Clostridiales (68.29%)
123 141949 bp 41.38 12.54 90.72
L3_133_000G1_scaffold_114
Order: Clostridiales (76.32%)
114 121341 bp 39.81 11.50 88.77
L3_133_000G1_scaffold_160
Order: Clostridiales (77.27%)
110 106206 bp 44.77 14.04 89.94
L3_133_000G1_scaffold_83
Order: Clostridiales (75%)
108 136551 bp 41.76 12.79 88.27
L3_133_000G1_scaffold_70
Order: Clostridiales (65.42%)
107 144509 bp 42.15 15.32 89.81
L3_133_000G1_scaffold_96
Order: Clostridiales (71.15%)
104 129151 bp 39.28 12.64 93.74
L3_133_000G1_scaffold_139
Order: Clostridiales (75.49%)
102 113522 bp 41.67 12.29 89.83
L3_133_000G1_scaffold_120
Order: Clostridiales (68.37%)
98 119453 bp 42.24 14.06 89.91
L3_133_000G1_scaffold_118
Order: Clostridiales (66.3%)
92 120553 bp 41.23 15.85 90.91
L3_133_000G1_scaffold_164
Order: Clostridiales (73.17%)
82 104902 bp 42.92 12.93 89.30
L3_133_000G1_scaffold_214
Order: Clostridiales (77.5%)
80 92826 bp 42.17 14.28 90.34
L3_133_000G1_scaffold_199
Phylum: Firmicutes (58.44%)
77 94904 bp 33.34 12.52 95.42
L3_133_000G1_scaffold_246
Order: Clostridiales (79.17%)
72 86076 bp 42.60 12.71 90.90
L3_133_000G1_scaffold_263
Order: Clostridiales (71.21%)
66 82580 bp 40.42 12.38 89.14
L3_133_000G1_scaffold_429
Order: Clostridiales (77.05%)
61 63077 bp 40.92 12.29 85.26
L3_133_000G1_scaffold_358
Order: Clostridiales (80.33%)
61 70142 bp 42.86 12.98 88.21
L3_133_000G1_scaffold_313
Order: Clostridiales (84.75%)
59 75074 bp 42.36 15.12 90.57
L3_133_000G1_scaffold_328
Order: Clostridiales (65.52%)
58 73562 bp 39.67 12.29 87.38
L3_133_000G1_scaffold_397
Order: Clostridiales (74.07%)
54 66682 bp 40.77 13.57 82.91
L3_133_000G1_scaffold_376
Order: Clostridiales (66.04%)
53 68522 bp 43.64 14.39 90.23
L3_133_000G1_scaffold_572
Order: Clostridiales (64.15%)
53 52914 bp 42.13 12.03 87.33
L3_133_000G1_scaffold_366
Order: Clostridiales (76.47%)
51 69600 bp 41.86 13.01 92.08
L3_133_000G1_scaffold_497
Order: Clostridiales (66.67%)
51 57615 bp 40.24 12.84 86.89
L3_133_000G1_scaffold_509
Phylum: Firmicutes (50.98%)
51 56868 bp 36.02 14.26 95.06
L3_133_000G1_scaffold_345
Order: Clostridiales (82.35%)
51 72080 bp 43.27 14.03 90.79
L3_133_000G1_scaffold_492
Order: Clostridiales (82%)
50 57889 bp 42.95 13.34 89.22
L3_133_000G1_scaffold_436
Order: Clostridiales (59.57%)
47 62444 bp 42.43 15.41 87.83
L3_133_000G1_scaffold_754
Order: Clostridiales (60.87%)
46 44673 bp 38.32 12.73 84.08
L3_133_000G1_scaffold_743
Order: Clostridiales (86.67%)
45 45229 bp 42.30 12.54 87.55
L3_133_000G1_scaffold_588
Order: Clostridiales (86.67%)
45 52118 bp 44.36 15.31 90.45
L3_133_000G1_scaffold_922
Phylum: Firmicutes (59.09%)
44 38475 bp 33.72 11.54 90.18
L3_133_000G1_scaffold_454
Order: Clostridiales (77.27%)
44 60907 bp 42.68 15.65 93.53
L3_133_000G1_scaffold_768
Order: Clostridiales (56.82%)
44 43912 bp 42.13 12.58 90.67
L3_133_000G1_scaffold_548
Order: Clostridiales (88.64%)
44 54385 bp 42.37 12.89 88.71
L3_133_000G1_scaffold_823
Order: Clostridiales (72.73%)
44 41703 bp 40.64 12.01 85.28
L3_133_000G1_scaffold_1518
Order: Clostridiales (55.81%)
43 25533 bp 35.93 11.66 90.93
Displaying items 1-50 of 134 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.