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SR-VP_26_10_2020_1_100CM_Methanoperedens_43_19

SR-VP_26_10_2020_1_100CM_unknown_43_19

Consensus taxonomy:

Description

From SRVP2_maxbin_scaffolds2bin_tsv_301 (J)

Displaying items 51-100 of 200 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SR-VP_26_10_2020_1_100CM_scaffold_3534835 18 14963 bp 41.52 20.92 79.98
SR-VP_26_10_2020_1_100CM_scaffold_130782
Order: Methanosarcinales (50%)
18 13352 bp 44.60 20.48 81.58
SR-VP_26_10_2020_1_100CM_scaffold_573541 18 12837 bp 44.33 21.38 81.14
SR-VP_26_10_2020_1_100CM_scaffold_2951849 18 13493 bp 42.44 19.14 87.88
SR-VP_26_10_2020_1_100CM_scaffold_4484207
Order: Methanosarcinales (50%)
18 15310 bp 40.23 20.07 74.50
SR-VP_26_10_2020_1_100CM_scaffold_3544028 18 19316 bp 43.18 18.55 90.21
SR-VP_26_10_2020_1_100CM_scaffold_1853328 17 13062 bp 42.86 18.45 88.19
SR-VP_26_10_2020_1_100CM_scaffold_6691160 17 15884 bp 43.53 19.49 84.18
SR-VP_26_10_2020_1_100CM_scaffold_6472139 17 15808 bp 42.54 18.03 84.36
SR-VP_26_10_2020_1_100CM_scaffold_5827339 17 14353 bp 43.02 19.19 87.39
SR-VP_26_10_2020_1_100CM_scaffold_345351 17 14372 bp 42.50 19.20 85.96
SR-VP_26_10_2020_1_100CM_scaffold_1423571 17 11307 bp 45.05 20.45 87.45
SR-VP_26_10_2020_1_100CM_scaffold_4316160 17 10554 bp 42.85 20.06 80.97
SR-VP_26_10_2020_1_100CM_scaffold_3592837
Species: Candidatus Methanoperedens nitroreducens (58.82%)
17 13197 bp 43.15 18.07 89.25
SR-VP_26_10_2020_1_100CM_scaffold_3356875 16 14829 bp 45.07 17.01 90.98
SR-VP_26_10_2020_1_100CM_scaffold_6902649
Order: Methanosarcinales (50%)
16 11303 bp 43.93 21.34 79.01
SR-VP_26_10_2020_1_100CM_scaffold_1927105
Order: Methanosarcinales (56.25%)
16 11362 bp 43.31 16.50 90.93
SR-VP_26_10_2020_1_100CM_scaffold_6231492 16 12785 bp 44.87 18.38 91.26
SR-VP_26_10_2020_1_100CM_scaffold_930855 15 11000 bp 40.90 19.57 89.92
SR-VP_26_10_2020_1_100CM_scaffold_5591654 15 15950 bp 42.29 18.45 79.39
SR-VP_26_10_2020_1_100CM_scaffold_3327757
Phylum: Euryarchaeota (53.33%)
15 14890 bp 41.46 19.58 86.17
SR-VP_26_10_2020_1_100CM_scaffold_4192145 15 14319 bp 41.66 18.19 83.11
SR-VP_26_10_2020_1_100CM_scaffold_4319181
Order: Methanosarcinales (66.67%)
15 13352 bp 41.81 19.10 96.66
SR-VP_26_10_2020_1_100CM_scaffold_3144724
Species: Candidatus Methanoperedens nitroreducens (60%)
15 10857 bp 43.77 21.32 92.90
SR-VP_26_10_2020_1_100CM_scaffold_2379617
Order: Methanosarcinales (53.33%)
15 18532 bp 42.86 19.09 90.04
SR-VP_26_10_2020_1_100CM_scaffold_4718151
Order: Methanosarcinales (73.33%)
15 10807 bp 44.93 20.57 93.30
SR-VP_26_10_2020_1_100CM_scaffold_616736 15 11104 bp 42.29 19.43 91.70
SR-VP_26_10_2020_1_100CM_scaffold_575579 14 13374 bp 42.69 18.58 87.27
SR-VP_26_10_2020_1_100CM_scaffold_1903088
Order: Methanosarcinales (64.29%)
14 11359 bp 40.12 16.53 85.39
SR-VP_26_10_2020_1_100CM_scaffold_2629522 13 11219 bp 42.04 17.72 71.40
SR-VP_26_10_2020_1_100CM_scaffold_5165317
Species: Candidatus Methanoperedens nitroreducens (76.92%)
13 9476 bp 40.62 20.31 84.66
SR-VP_26_10_2020_1_100CM_scaffold_3977865 13 8897 bp 42.33 18.15 91.82
SR-VP_26_10_2020_1_100CM_scaffold_1110318 13 11884 bp 44.04 17.75 89.62
SR-VP_26_10_2020_1_100CM_scaffold_1042009 13 12676 bp 44.01 19.51 91.40
SR-VP_26_10_2020_1_100CM_scaffold_2716165
Species: Candidatus Methanoperedens nitroreducens (66.67%)
12 8691 bp 44.36 18.12 91.78
SR-VP_26_10_2020_1_100CM_scaffold_5713033 12 10292 bp 42.38 19.46 85.29
SR-VP_26_10_2020_1_100CM_scaffold_4627366
Species: Candidatus Methanoperedens nitroreducens (50%)
12 8624 bp 39.94 17.97 81.51
SR-VP_26_10_2020_1_100CM_scaffold_5339230
Species: Candidatus Methanoperedens nitroreducens (58.33%)
12 8558 bp 40.54 17.53 86.48
SR-VP_26_10_2020_1_100CM_scaffold_4663262 12 12558 bp 43.98 17.64 91.23
SR-VP_26_10_2020_1_100CM_scaffold_5150372
Species: Candidatus Methanoperedens nitroreducens (90.91%)
11 8023 bp 44.38 21.22 87.61
SR-VP_26_10_2020_1_100CM_scaffold_35031
Domain: Archaea (54.55%)
11 9556 bp 39.80 19.80 70.92
SR-VP_26_10_2020_1_100CM_scaffold_687590 11 8695 bp 42.07 18.43 87.43
SR-VP_26_10_2020_1_100CM_scaffold_4724159 11 10639 bp 41.79 17.86 85.55
SR-VP_26_10_2020_1_100CM_scaffold_908550
Domain: Archaea (54.55%)
11 7597 bp 43.40 18.95 83.20
SR-VP_26_10_2020_1_100CM_scaffold_2884987 11 8205 bp 42.63 16.88 88.85
SR-VP_26_10_2020_1_100CM_scaffold_3695492 11 7044 bp 40.87 19.27 86.97
SR-VP_26_10_2020_1_100CM_scaffold_3354307 11 13752 bp 44.47 19.36 85.06
SR-VP_26_10_2020_1_100CM_scaffold_6541082 11 7653 bp 41.41 21.49 76.13
SR-VP_26_10_2020_1_100CM_scaffold_63256 11 8588 bp 44.20 19.97 91.91
SR-VP_26_10_2020_1_100CM_scaffold_5605976
Phylum: Euryarchaeota (50%)
10 6530 bp 43.94 20.18 75.67
Displaying items 51-100 of 200 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.