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SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

SCNPILOT_CONT_1000_BF_Nitrosospira_56_92
In projects: SCNPILOT_CONT_1000_BF

Consensus taxonomy: Nitrosospira  →  Nitrosomonadales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 101-150 of 274 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_1000_bf_scaffold_1040
Genus: Nitrosospira (87.5%)
16 25066 bp 55.64 104.71 84.54
SCNpilot_cont_1000_bf_scaffold_1356
Phylum: Proteobacteria (100%)
7 11599 bp 48.71 30.78 84.63
SCNpilot_cont_1000_bf_scaffold_4128
Species: Nitrosospira sp. NpAV (50%)
20 17614 bp 52.49 74.76 84.67
SCNpilot_cont_1000_bf_scaffold_8473
Species: Nitrosospira lacus (87.5%)
8 8447 bp 51.19 88.34 84.70
SCNpilot_cont_1000_bf_scaffold_34285
Species: Cyanothece sp. PCC 7425 (50%)
2 1399 bp 51.32 109.72 84.92
SCNpilot_cont_1000_bf_scaffold_3342
Species: Nitrosospira sp. NpAV (81.82%)
11 11925 bp 53.06 89.66 84.93
SCNpilot_cont_1000_bf_scaffold_1014
Genus: Nitrosospira (92%)
50 53749 bp 55.39 100.18 85.13
SCNpilot_cont_1000_bf_scaffold_1177
Genus: Nitrosospira (67.92%)
53 58497 bp 57.19 110.01 85.14
SCNpilot_cont_1000_bf_scaffold_1939
Genus: Nitrosospira (50%)
10 8890 bp 54.43 100.82 85.21
SCNpilot_cont_1000_bf_scaffold_10023
Species: Nitrosospira lacus (66.67%)
3 3344 bp 60.86 109.30 85.23
SCNpilot_cont_1000_bf_scaffold_2501
Genus: Nitrosospira (100%)
11 10747 bp 57.38 111.43 85.31
SCNpilot_cont_1000_bf_scaffold_14849
Species: Nitrosospira sp. NpAV (50%)
4 4570 bp 56.35 104.49 85.34
SCNpilot_cont_1000_bf_scaffold_1256
Genus: Nitrosospira (64.29%)
14 12362 bp 52.77 29.83 85.37
SCNpilot_cont_1000_bf_scaffold_14091
Species: Nitrosospira multiformis (50%)
4 6112 bp 58.77 133.43 85.41
SCNpilot_cont_1000_bf_scaffold_2947
Species: Nitrosospira lacus (68.97%)
29 28685 bp 57.73 108.31 85.45
SCNpilot_cont_1000_bf_scaffold_33571
Species: Nitrosospira multiformis (66.67%)
3 2303 bp 55.62 95.74 85.45
SCNpilot_cont_1000_bf_scaffold_1527
Genus: Nitrosospira (100%)
15 14872 bp 56.56 108.07 85.51
SCNpilot_cont_1000_bf_scaffold_2510
Species: Nitrosospira sp. NpAV (50%)
12 12766 bp 57.65 119.01 85.54
SCNpilot_cont_1000_bf_scaffold_3464
Genus: Nitrosospira (57.14%)
7 6256 bp 54.28 98.98 85.65
SCNpilot_cont_1000_bf_scaffold_4660
Species: Nitrosospira sp. NpAV (80%)
5 6224 bp 58.87 108.89 85.65
SCNpilot_cont_1000_bf_scaffold_12522
Order: Burkholderiales (66.67%)
3 2892 bp 59.99 117.91 85.68
SCNpilot_cont_1000_bf_scaffold_6365
Species: Nitrosospira sp. NpAV (50%)
4 4423 bp 60.73 121.98 85.73
SCNpilot_cont_1000_bf_scaffold_1057
Genus: Nitrosospira (76.92%)
13 14630 bp 55.65 98.02 85.82
SCNpilot_cont_1000_bf_scaffold_1389
Genus: Nitrosospira (92.11%)
38 38946 bp 56.44 105.00 85.93
SCNpilot_cont_1000_bf_scaffold_7080
Class: Betaproteobacteria (60%)
5 4148 bp 49.08 35.08 85.99
SCNpilot_cont_1000_bf_scaffold_29170
Genus: Nitrosospira (100%)
5 1580 bp 60.76 115.98 86.01
SCNpilot_cont_1000_bf_scaffold_4562
Class: Betaproteobacteria (60%)
5 5352 bp 53.44 95.99 86.04
SCNpilot_cont_1000_bf_scaffold_5189
Species: Nitrosospira lacus (50%)
6 4956 bp 55.02 100.08 86.14
SCNpilot_cont_1000_bf_scaffold_777
Class: Betaproteobacteria (61.9%)
21 28481 bp 53.94 44.99 86.17
SCNpilot_cont_1000_bf_scaffold_916
Genus: Nitrosospira (71.43%)
14 17370 bp 58.25 120.22 86.22
SCNpilot_cont_1000_bf_scaffold_3694
Genus: Nitrosospira (87.5%)
16 14891 bp 54.83 103.02 86.27
SCNpilot_cont_1000_bf_scaffold_24073
Species: Nitrosospira multiformis (50%)
2 1825 bp 54.96 111.23 86.30
SCNpilot_cont_1000_bf_scaffold_4018
Species: Nitrosospira lacus (50%)
4 5744 bp 54.09 105.07 86.33
SCNpilot_cont_1000_bf_scaffold_10183
Phylum: Proteobacteria (69.23%)
13 6726 bp 48.59 46.02 86.35
SCNpilot_cont_1000_bf_scaffold_776
Species: Nitrosospira sp. NpAV (57.14%)
42 52660 bp 54.99 102.62 86.41
SCNpilot_cont_1000_bf_scaffold_1272
Genus: Nitrosospira (89.66%)
29 28735 bp 54.30 100.05 86.47
SCNpilot_cont_1000_bf_scaffold_987
Genus: Nitrosospira (94.12%)
17 20515 bp 57.78 113.75 86.51
SCNpilot_cont_1000_bf_scaffold_679
Genus: Nitrosospira (60.47%)
43 43315 bp 54.80 89.65 86.59
SCNpilot_cont_1000_bf_scaffold_34217
Species: Nitrosospira multiformis (50%)
2 1401 bp 56.10 115.27 86.72
SCNpilot_cont_1000_bf_scaffold_12674
Species: Candidatus Solibacter usitatus (66.67%)
3 2866 bp 58.76 123.95 87.09
SCNpilot_cont_1000_bf_scaffold_1917
Species: Nitrosospira sp. NpAV (50%)
14 14642 bp 59.87 105.18 87.14
SCNpilot_cont_1000_bf_scaffold_6463
Genus: Nitrosospira (80%)
5 5281 bp 57.79 108.98 87.14
SCNpilot_cont_1000_bf_scaffold_8356
Species: Nitrosospira sp. NpAV (62.5%)
8 8898 bp 54.52 95.78 87.42
SCNpilot_cont_1000_bf_scaffold_399
Genus: Nitrosospira (85.71%)
49 60861 bp 55.36 100.58 87.46
SCNpilot_cont_1000_bf_scaffold_1136
Genus: Nitrosospira (86.21%)
29 26084 bp 55.91 100.87 87.55
SCNpilot_cont_1000_bf_scaffold_941
Species: Nitrosospira sp. NpAV (55.56%)
18 17362 bp 54.20 52.21 87.55
SCNpilot_cont_1000_bf_scaffold_729
Species: Nitrosospira multiformis (59.09%)
22 22900 bp 54.75 65.57 87.59
SCNpilot_cont_1000_bf_scaffold_2777
Class: Betaproteobacteria (55.56%)
9 7132 bp 51.32 47.57 87.66
SCNpilot_cont_1000_bf_scaffold_979
Class: Betaproteobacteria (57.41%)
54 37419 bp 51.98 69.54 87.67
SCNpilot_cont_1000_bf_scaffold_665
Genus: Nitrosospira (71.74%)
46 60334 bp 57.33 110.16 87.67
Displaying items 101-150 of 274 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.