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SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11

In projects: SCNPILOT_CONT_1000_P

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

from TS-ESOM

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Partial matches in Contig names

Min-Max Range: 55.89 - 68.22

Min-Max Range: 4.13 - 14.26

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Displaying items 51-100 of 213 in total
Contig (seq size) Coding Density (%) Species Genus Order Class Phylum Domain
SCNpilot_cont_1000_p_scaffold_1952
17441 bp | 11.01 x | 65.98%
0.929878
Parvibaculum lava...
12.50%
Parvibaculum
12.50%
Rhizobiales
31.25%
Alphaproteobacteria
87.50%
Proteobacteria
87.50%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_1961
17399 bp | 11.01 x | 64.97%
0.919191
Parvibaculum lava...
18.75%
unknown
25.00%
Rhizobiales
25.00%
Alphaproteobacteria
62.50%
Proteobacteria
81.25%
Bacteria
87.50%
SCNpilot_cont_1000_p_scaffold_1981
17297 bp | 10.67 x | 63.43%
0.949587
unknown
17.65%
unknown
41.18%
unknown
35.29%
Alphaproteobacteria
58.82%
Proteobacteria
76.47%
Bacteria
76.47%
SCNpilot_cont_1000_p_scaffold_1994
17208 bp | 11.23 x | 63.01%
0.887727
Rhodopseudomonas ...
11.76%
Rhodopseudomonas
11.76%
Rhizobiales
41.18%
Alphaproteobacteria
82.35%
Proteobacteria
94.12%
Bacteria
94.12%
SCNpilot_cont_1000_p_scaffold_2021
17000 bp | 14.26 x | 63.22%
0.888882
unknown
53.85%
unknown
53.85%
unknown
57.69%
unknown
53.85%
unknown
53.85%
unknown
53.85%
SCNpilot_cont_1000_p_scaffold_3270
16714 bp | 10.46 x | 63.28%
0.920426
Magnetospirillum ...
12.50%
unknown
18.75%
Rhizobiales
18.75%
Alphaproteobacteria
37.50%
Proteobacteria
56.25%
Bacteria
81.25%
SCNpilot_cont_1000_p_scaffold_2074
16677 bp | 11.11 x | 65.11%
0.941176
unknown
16.67%
unknown
33.33%
unknown
33.33%
Alphaproteobacteria
61.11%
Proteobacteria
72.22%
Bacteria
83.33%
SCNpilot_cont_1000_p_scaffold_2111
16425 bp | 10.56 x | 62.54%
0.915982
unknown
15.00%
unknown
25.00%
Rhizobiales
30.00%
Alphaproteobacteria
60.00%
Proteobacteria
70.00%
Bacteria
75.00%
SCNpilot_cont_1000_p_scaffold_2128
16308 bp | 11.19 x | 67.16%
0.952723
Parvibaculum lava...
33.33%
Parvibaculum
33.33%
Rhizobiales
41.67%
Alphaproteobacteria
83.33%
Proteobacteria
83.33%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_2138
16257 bp | 10.03 x | 64.77%
0.955342
Skermanella aerolata
14.29%
Sphingomonas
28.57%
Sphingomonadales
42.86%
Alphaproteobacteria
85.71%
Proteobacteria
92.86%
Bacteria
92.86%
SCNpilot_cont_1000_p_scaffold_3327
16079 bp | 9.59 x | 63.60%
0.939051
alpha proteobacte...
15.38%
unknown
23.08%
Rhizobiales
46.15%
Alphaproteobacteria
100.00%
Proteobacteria
100.00%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_2170
16026 bp | 10.89 x | 62.60%
0.946836
unknown
23.08%
unknown
38.46%
unknown
38.46%
Alphaproteobacteria
69.23%
Proteobacteria
76.92%
Bacteria
76.92%
SCNpilot_cont_1000_p_scaffold_2196
15878 bp | 10.53 x | 62.85%
0.932611
Parvibaculum lava...
14.29%
unknown
21.43%
Rhizobiales
57.14%
Alphaproteobacteria
92.86%
Proteobacteria
92.86%
Bacteria
92.86%
SCNpilot_cont_1000_p_scaffold_3242
15872 bp | 10.66 x | 64.11%
0.920489
Oceanibaculum ind...
11.11%
unknown
27.78%
Rhodospirillales
27.78%
Alphaproteobacteria
72.22%
Proteobacteria
88.89%
Bacteria
88.89%
SCNpilot_cont_1000_p_scaffold_5081
15566 bp | 9.80 x | 65.86%
0.924129
Parvibaculum lava...
33.33%
Parvibaculum
33.33%
Rhizobiales
53.33%
Alphaproteobacteria
93.33%
Proteobacteria
100.00%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_3085
15123 bp | 12.07 x | 64.75%
0.929379
Gemmatimonadetes ...
14.29%
unknown
35.71%
unknown
35.71%
Alphaproteobacteria
35.71%
Proteobacteria
57.14%
Bacteria
92.86%
SCNpilot_cont_1000_p_scaffold_3890
15065 bp | 11.58 x | 66.15%
0.908264
Parvibaculum lava...
20.00%
unknown
33.33%
Rhizobiales
40.00%
Alphaproteobacteria
80.00%
Proteobacteria
86.67%
Bacteria
86.67%
SCNpilot_cont_1000_p_scaffold_3902
15040 bp | 11.09 x | 66.06%
0.942487
RLO_PLX_64_10
12.50%
unknown
37.50%
Rhizobiales
43.75%
Alphaproteobacteria
68.75%
Proteobacteria
68.75%
Bacteria
87.50%
SCNpilot_cont_1000_p_scaffold_2345
15028 bp | 11.98 x | 65.94%
0.941443
Parvibaculum lava...
25.00%
unknown
31.25%
Rhizobiales
50.00%
Alphaproteobacteria
68.75%
Proteobacteria
75.00%
Bacteria
87.50%
SCNpilot_cont_1000_p_scaffold_5207
14981 bp | 10.90 x | 63.32%
0.920166
unknown
12.50%
unknown
43.75%
unknown
25.00%
Alphaproteobacteria
62.50%
Proteobacteria
87.50%
Bacteria
87.50%
SCNpilot_cont_1000_p_scaffold_2399
14776 bp | 11.00 x | 64.51%
0.915877
uncultured bacterium
20.00%
unknown
50.00%
unknown
30.00%
Alphaproteobacteria
50.00%
Proteobacteria
80.00%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_2403
14762 bp | 11.72 x | 64.79%
0.950278
Sphingomonas sp. ...
8.33%
Caulobacter
25.00%
Caulobacterales
25.00%
Alphaproteobacteria
58.33%
Proteobacteria
75.00%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_2468
14410 bp | 12.13 x | 65.66%
0.870229
uncultured bacter...
18.18%
unknown
36.36%
unknown
36.36%
Alphaproteobacteria
63.64%
Proteobacteria
63.64%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_5774
14376 bp | 10.90 x | 65.54%
0.952212
uncultured bacterium
18.18%
unknown
36.36%
Caulobacterales
27.27%
Alphaproteobacteria
54.55%
Proteobacteria
63.64%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_2569
13919 bp | 10.09 x | 65.48%
0.959983
alpha proteobacte...
28.57%
unknown
64.29%
unknown
57.14%
Alphaproteobacteria
78.57%
Proteobacteria
85.71%
Bacteria
85.71%
SCNpilot_cont_1000_p_scaffold_3833
13855 bp | 11.26 x | 64.98%
0.878888
Oceanibaculum ind...
11.76%
unknown
23.53%
Rhizobiales
41.18%
Alphaproteobacteria
88.24%
Proteobacteria
88.24%
Bacteria
88.24%
SCNpilot_cont_1000_p_scaffold_4588
13798 bp | 10.42 x | 63.76%
0.876649
unknown
29.41%
unknown
41.18%
unknown
47.06%
Alphaproteobacteria
41.18%
Proteobacteria
52.94%
Bacteria
70.59%
SCNpilot_cont_1000_p_scaffold_5832
13600 bp | 12.32 x | 66.46%
0.935735
alpha proteobacte...
26.67%
unknown
33.33%
unknown
46.67%
Alphaproteobacteria
86.67%
Proteobacteria
86.67%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_2674
13489 bp | 10.53 x | 63.69%
0.935429
Acidocella aminol...
14.29%
Bradyrhizobium
14.29%
Rhizobiales
42.86%
Alphaproteobacteria
85.71%
Proteobacteria
85.71%
Bacteria
92.86%
SCNpilot_cont_1000_p_scaffold_2681
13467 bp | 10.99 x | 63.64%
0.836266
Candidatus Phaeom...
11.11%
unknown
33.33%
unknown
44.44%
Alphaproteobacteria
66.67%
Proteobacteria
83.33%
Bacteria
88.89%
SCNpilot_cont_1000_p_scaffold_2707
13392 bp | 11.26 x | 66.86%
0.91129
unknown
21.43%
unknown
21.43%
Rhizobiales
21.43%
Alphaproteobacteria
35.71%
Proteobacteria
64.29%
Bacteria
78.57%
SCNpilot_cont_1000_p_scaffold_2728
13302 bp | 10.43 x | 64.93%
0.901443
Nitrospirillum am...
18.18%
Nitrospirillum
18.18%
Rhodospirillales
27.27%
Alphaproteobacteria
63.64%
Proteobacteria
81.82%
Bacteria
90.91%
SCNpilot_cont_1000_p_scaffold_4060
13208 bp | 11.39 x | 63.26%
0.95851
Nitrospirillum am...
21.43%
Nitrospirillum
21.43%
Rhodospirillales
21.43%
Alphaproteobacteria
78.57%
Proteobacteria
100.00%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_2767
13151 bp | 10.74 x | 64.79%
0.927762
Polymorphum gilvum
20.00%
unknown
50.00%
unknown
70.00%
Alphaproteobacteria
100.00%
Proteobacteria
100.00%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_2900
12711 bp | 11.37 x | 66.19%
0.910078
unknown
11.76%
Burkholderia
17.65%
Rhizobiales
29.41%
Alphaproteobacteria
52.94%
Proteobacteria
82.35%
Bacteria
88.24%
SCNpilot_cont_1000_p_scaffold_2914
12680 bp | 10.82 x | 63.87%
0.940694
Candidatus Soliba...
27.27%
Candidatus Soliba...
27.27%
Caulobacterales
36.36%
Alphaproteobacteria
36.36%
Proteobacteria
45.45%
Bacteria
72.73%
SCNpilot_cont_1000_p_scaffold_3108
12673 bp | 9.61 x | 66.38%
0.953523
Rhodopseudomonas ...
25.00%
Rhodopseudomonas
25.00%
Rhizobiales
37.50%
Alphaproteobacteria
62.50%
Proteobacteria
87.50%
Bacteria
87.50%
SCNpilot_cont_1000_p_scaffold_5954
12573 bp | 10.58 x | 66.21%
0.941303
Sphingopyxis sp. ...
11.11%
Sphingobium
22.22%
Sphingomonadales
33.33%
Alphaproteobacteria
100.00%
Proteobacteria
100.00%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_2945
12560 bp | 10.13 x | 64.80%
0.939411
Candidatus Phaeom...
16.67%
unknown
25.00%
Caulobacterales
33.33%
Alphaproteobacteria
91.67%
Proteobacteria
91.67%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_2993
12448 bp | 10.52 x | 65.68%
0.9375
Parvibaculum lava...
18.75%
Parvibaculum
18.75%
Rhizobiales
31.25%
Alphaproteobacteria
87.50%
Proteobacteria
87.50%
Bacteria
93.75%
SCNpilot_cont_1000_p_scaffold_3031
12357 bp | 11.90 x | 62.13%
0.955329
Nitrospirillum am...
44.44%
Nitrospirillum
44.44%
Rhodospirillales
44.44%
Alphaproteobacteria
100.00%
Proteobacteria
100.00%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_4822
12166 bp | 10.99 x | 61.43%
0.76048
unknown
33.33%
unknown
53.33%
unknown
33.33%
unknown
33.33%
Proteobacteria
40.00%
Bacteria
66.67%
SCNpilot_cont_1000_p_scaffold_4880
12010 bp | 11.01 x | 66.85%
0.975687
Parvibaculum lava...
13.33%
unknown
33.33%
unknown
40.00%
Alphaproteobacteria
86.67%
Proteobacteria
86.67%
Bacteria
93.33%
SCNpilot_cont_1000_p_scaffold_3301
11980 bp | 11.35 x | 65.08%
0.919533
alpha proteobacte...
15.38%
unknown
23.08%
Rhizobiales
38.46%
Alphaproteobacteria
84.62%
Proteobacteria
100.00%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_4399
11957 bp | 11.39 x | 65.18%
0.938362
Parvibaculum lava...
23.53%
unknown
29.41%
Rhizobiales
47.06%
Alphaproteobacteria
58.82%
Proteobacteria
70.59%
Bacteria
76.47%
SCNpilot_cont_1000_p_scaffold_3246
11746 bp | 10.83 x | 64.58%
0.971054
Burkholderia phen...
11.11%
Burkholderia
11.11%
Rhizobiales
44.44%
Alphaproteobacteria
66.67%
Proteobacteria
88.89%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_3334
11551 bp | 11.64 x | 65.89%
0.919661
RLO_Verrucomicrob...
16.67%
unknown
41.67%
unknown
33.33%
Alphaproteobacteria
58.33%
Proteobacteria
58.33%
Bacteria
83.33%
SCNpilot_cont_1000_p_scaffold_8452
11467 bp | 9.77 x | 66.51%
0.956222
Rhodovulum sp. PH10
13.33%
unknown
20.00%
Rhizobiales
33.33%
Alphaproteobacteria
100.00%
Proteobacteria
100.00%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_3375
11450 bp | 11.20 x | 66.43%
0.929869
Parvibaculum lava...
21.43%
Parvibaculum
21.43%
Caulobacterales
35.71%
Alphaproteobacteria
92.86%
Proteobacteria
100.00%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_3751
11417 bp | 10.25 x | 59.89%
0.872646
unknown
33.33%
unknown
33.33%
unknown
33.33%
Alphaproteobacteria
46.67%
Proteobacteria
66.67%
Bacteria
66.67%
Displaying items 51-100 of 213 in total