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SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586

In projects: SCNPILOT_SOLID2_TRIM150

Consensus taxonomy: Sphingobacteriales  →  Sphingobacteriia  →  Bacteroidetes  →  Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID2_TRIM150_UNK

Properties

Avg. coverage: 585.61 Longest contig: 71.37 Kbp Bin length: 3.55 Mbp GC content: 40.13 %
Contigs count: 254 Features count: 3323 rRNAs count: 0 tRNAs count: 29

Genome completeness

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Displaying items 101-150 of 254 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_solids2_trim150_scaffold_1326
Phylum: Bacteroidetes (85.19%)
27 33639 bp 39.81 586.93 90.02
scnpilot_solids2_trim150_scaffold_4157
Phylum: Bacteroidetes (50%)
4 5569 bp 42.52 558.52 90.02
scnpilot_solids2_trim150_scaffold_959
Order: Sphingobacteriales (70.37%)
27 26720 bp 40.45 536.82 90.01
scnpilot_solids2_trim150_scaffold_3679
Order: Sphingobacteriales (77.78%)
9 8613 bp 39.64 555.89 90.00
scnpilot_solids2_trim150_scaffold_1436
Order: Sphingobacteriales (67.27%)
57 53706 bp 41.58 593.64 90.00
scnpilot_solids2_trim150_scaffold_907
Phylum: Bacteroidetes (85.71%)
36 39996 bp 41.12 606.36 89.99
scnpilot_solids2_trim150_scaffold_1337
Phylum: Bacteroidetes (86.67%)
30 31258 bp 37.01 507.68 89.95
scnpilot_solids2_trim150_scaffold_4055
Species: Niastella koreensis (50%)
6 5720 bp 40.37 573.96 89.84
scnpilot_solids2_trim150_scaffold_19629
Species: Flavihumibacter petaseus (50%)
2 1370 bp 39.78 473.43 89.78
scnpilot_solids2_trim150_scaffold_382
Order: Sphingobacteriales (59.09%)
68 71370 bp 39.91 608.33 89.78
scnpilot_solids2_trim150_scaffold_2933
Phylum: Bacteroidetes (54.55%)
11 13856 bp 41.13 506.29 89.59
scnpilot_solids2_trim150_scaffold_1945
Order: Sphingobacteriales (50%)
8 12687 bp 41.48 595.32 89.57
scnpilot_solids2_trim150_scaffold_1837
Order: Sphingobacteriales (52%)
50 51639 bp 40.06 610.07 89.55
scnpilot_solids2_trim150_scaffold_4258
Phylum: Bacteroidetes (57.14%)
7 9438 bp 41.05 595.25 89.54
scnpilot_solids2_trim150_scaffold_3316
Phylum: Bacteroidetes (100%)
5 7787 bp 37.24 591.85 89.42
scnpilot_solids2_trim150_scaffold_1649
Order: Sphingobacteriales (84.62%)
13 15783 bp 39.54 626.15 89.39
scnpilot_solids2_trim150_scaffold_10006
Order: Sphingobacteriales (50%)
6 4588 bp 41.15 459.38 89.39
scnpilot_solids2_trim150_scaffold_2255
Order: Sphingobacteriales (80.95%)
21 24460 bp 40.52 590.12 89.28
scnpilot_solids2_trim150_scaffold_7390
Phylum: Bacteroidetes (85.71%)
7 5688 bp 39.91 571.31 89.24
scnpilot_solids2_trim150_scaffold_1220
Order: Sphingobacteriales (54.17%)
24 30250 bp 38.93 609.30 89.19
scnpilot_solids2_trim150_scaffold_2481
Phylum: Bacteroidetes (73.33%)
15 21650 bp 40.14 581.77 89.14
scnpilot_solids2_trim150_scaffold_8808
Order: Sphingobacteriales (50%)
6 4202 bp 38.81 544.24 89.10
scnpilot_solids2_trim150_scaffold_2707
Phylum: Bacteroidetes (77.27%)
22 21219 bp 40.29 619.36 88.97
scnpilot_solids2_trim150_scaffold_673
Order: Sphingobacteriales (64.81%)
54 50230 bp 39.34 598.12 88.95
scnpilot_solids2_trim150_scaffold_6392
Phylum: Bacteroidetes (50%)
6 6280 bp 41.86 583.64 88.90
scnpilot_solids2_trim150_scaffold_2300
Species: Niastella koreensis (54.55%)
11 10469 bp 40.99 590.03 88.83
scnpilot_solids2_trim150_scaffold_773
Order: Sphingobacteriales (63.27%)
49 55165 bp 39.75 571.82 88.78
scnpilot_solids2_trim150_scaffold_756
Order: Sphingobacteriales (70.73%)
42 53453 bp 39.79 599.67 88.73
scnpilot_solids2_trim150_scaffold_1580
Phylum: Bacteroidetes (88.89%)
9 15449 bp 37.94 544.45 88.67
scnpilot_solids2_trim150_scaffold_737
Order: Sphingobacteriales (80.77%)
27 29739 bp 39.83 595.53 88.66
scnpilot_solids2_trim150_scaffold_12406
Species: Flavihumibacter solisilvae (66.67%)
3 1933 bp 38.90 478.40 88.62
scnpilot_solids2_trim150_scaffold_5941
Species: Niastella koreensis (57.14%)
7 4039 bp 42.11 593.61 88.54
scnpilot_solids2_trim150_scaffold_4226
Species: Niastella koreensis (50%)
6 5460 bp 36.61 531.21 88.52
scnpilot_solids2_trim150_scaffold_1695
Order: Sphingobacteriales (63.64%)
11 13691 bp 41.01 610.82 88.50
scnpilot_solids2_trim150_scaffold_3838
Phylum: Bacteroidetes (57.14%)
7 8417 bp 40.55 579.02 88.43
scnpilot_solids2_trim150_scaffold_872
Phylum: Bacteroidetes (77.27%)
22 26472 bp 39.45 623.41 88.42
scnpilot_solids2_trim150_scaffold_3050
Phylum: Bacteroidetes (55.56%)
10 8845 bp 40.05 612.18 88.39
scnpilot_solids2_trim150_scaffold_611
Order: Sphingobacteriales (69.7%)
34 32029 bp 39.74 614.87 88.38
scnpilot_solids2_trim150_scaffold_3812
Order: Sphingobacteriales (58.33%)
12 14323 bp 40.31 604.75 88.37
scnpilot_solids2_trim150_scaffold_6259
Order: Sphingobacteriales (88.89%)
9 6727 bp 39.97 582.56 88.35
scnpilot_solids2_trim150_scaffold_1062
Phylum: Bacteroidetes (70%)
20 21877 bp 40.66 592.27 88.34
scnpilot_solids2_trim150_scaffold_16126
Species: Niabella soli (50%)
2 1586 bp 41.11 473.46 88.34
scnpilot_solids2_trim150_scaffold_2887
Phylum: Bacteroidetes (58.33%)
12 9799 bp 41.75 613.03 88.33
scnpilot_solids2_trim150_scaffold_1000
Order: Sphingobacteriales (70%)
20 21816 bp 40.32 591.21 88.33
scnpilot_solids2_trim150_scaffold_1321
Order: Sphingobacteriales (56.67%)
31 29327 bp 40.90 612.52 88.32
scnpilot_solids2_trim150_scaffold_3403
Phylum: Bacteroidetes (90%)
10 14114 bp 40.22 554.19 88.32
scnpilot_solids2_trim150_scaffold_3115
Genus: Flavihumibacter (50%)
12 11039 bp 40.70 596.15 88.30
scnpilot_solids2_trim150_scaffold_4331
Order: Sphingobacteriales (50%)
11 9639 bp 37.98 589.93 88.22
scnpilot_solids2_trim150_scaffold_943
Phylum: Bacteroidetes (84.62%)
26 29295 bp 41.88 611.81 88.17
scnpilot_solids2_trim150_scaffold_1784
Order: Sphingobacteriales (66.67%)
21 22530 bp 40.46 603.75 87.82
Displaying items 101-150 of 254 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.