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ACD18

Rifle_ACD_RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated_32_1
In projects: Rifle_ACD  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated  →  Magasanikbacteria  →  Parcubacteria  →  Bacteria

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 43.39 Kbp Bin length: 1.28 Mbp GC content: 31.95 %
Contigs count: 188 Features count: 1286 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38

Description

OD1

Displaying items 51-100 of 188 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ACD18_182 ACD18_6286.2675.20
Species: uncultured bacterium (100%)
2 2715 bp 36.46 1.00 95.47
done Jill Banfield (11/15/12)
ACD18_144 ACD18_193976.2688.5
Species: uncultured bacterium (66.67%)
3 2722 bp 31.63 1.00 79.46
done Jill Banfield (11/15/12)
ACD18_165 ACD18_155829.2694.4
Species: uncultured bacterium (100%)
1 2728 bp 33.14 1.00 10.34
done Jill Banfield (11/15/12)
ACD18_98 ACD18_1639.2740.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (80%)
5 2786 bp 29.50 1.00 83.78
done Jill Banfield (11/15/12)
ACD18_58 ACD18_1753.2742.23
Species: uncultured bacterium (75%)
4 2788 bp 30.24 1.00 98.35
done Jill Banfield (11/15/12)
ACD18_123 ACD18_380992.2756.5
Species: R_OD1_Magasanikbacteria_44_11 (50%)
2 2790 bp 27.17 1.00 69.89
done Jill Banfield (11/15/12)
ACD18_20 ACD18_3082.2757.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 2803 bp 27.54 1.00 80.06
done Jill Banfield (11/15/12)
ACD18_156 ACD18_79175.2781.4
Species: uncultured bacterium (50%)
2 2815 bp 33.14 1.00 75.45
done Jill Banfield (11/15/12)
ACD18_31 ACD18_87053.2788.6
Species: uncultured bacterium (100%)
3 2822 bp 29.20 1.00 74.20
done Jill Banfield (11/15/12)
ACD18_147 ACD18_1649.2800.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 2846 bp 31.69 1.00 71.47
done Jill Banfield (11/15/12)
ACD18_172 ACD18_93916.2863.6
Species: uncultured bacterium (100%)
3 2897 bp 32.17 1.00 78.08
done Jill Banfield (11/15/12)
ACD18_32 ACD18_24801.2867.5
Species: uncultured bacterium (100%)
4 2901 bp 33.44 1.00 98.45
done Jill Banfield (11/15/12)
ACD18_170 ACD18_69666.2917.5
Species: uncultured bacterium (100%)
3 2951 bp 32.29 1.00 63.23
done Jill Banfield (11/15/12)
ACD18_178 ACD18_208343.2919.5
Species: uncultured bacterium (100%)
7 2953 bp 32.07 1.00 77.62
done Jill Banfield (11/15/12)
ACD18_116 ACD18_13308.2953.6
Species: uncultured bacterium (100%)
3 2987 bp 29.90 1.00 91.60
done Jill Banfield (11/15/12)
ACD18_153 ACD18_305239.2954.6
Species: uncultured bacterium (66.67%)
3 2988 bp 32.76 1.00 99.40
done Jill Banfield (11/15/12)
ACD18_183 ACD18_4624.2955.17
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
1 2995 bp 38.40 1.00 99.97
done Jill Banfield (11/15/12)
ACD18_127 ACD18_3962.2951.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
3 2997 bp 29.20 1.00 62.96
done Jill Banfield (11/15/12)
ACD18_158 ACD18_39124.2976.6
Species: uncultured bacterium (100%)
3 3010 bp 27.04 1.00 93.09
done Jill Banfield (11/15/12)
ACD18_112 ACD18_1200.3006.21
Species: uncultured bacterium (66.67%)
3 3046 bp 30.86 1.00 55.15
done Jill Banfield (11/15/12)
ACD18_16 ACD18_1979.3067.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 3113 bp 30.49 1.00 90.59
done Jill Banfield (11/15/12)
ACD18_130 ACD18_297594.3094.5
Class: Magasanikbacteria (66.67%)
3 3128 bp 31.46 1.00 80.66
done Jill Banfield (11/15/12)
ACD18_146 ACD18_1959.3108.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 3148 bp 34.91 1.00 90.91
done Jill Banfield (11/15/12)
ACD18_164 ACD18_233382.3131.6
Species: uncultured bacterium (100%)
5 3165 bp 29.57 1.00 77.82
done Jill Banfield (11/15/12)
ACD18_72 ACD18_61444.3138.6
Species: uncultured bacterium (100%)
4 3172 bp 29.26 1.00 95.43
done Jill Banfield (11/15/12)
ACD18_161 ACD18_1025.3163.22
Species: uncultured bacterium (80%)
5 3203 bp 32.63 1.00 82.70
done Jill Banfield (11/15/12)
ACD18_155 ACD18_562.3279.24
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 3319 bp 31.43 1.00 82.89
done Jill Banfield (11/15/12)
ACD18_133 ACD18_217180.3300.5
Species: uncultured bacterium (80%)
5 3334 bp 29.12 1.00 69.56
done Jill Banfield (11/15/12)
ACD18_84 ACD18_147591.3316.5
Species: uncultured bacterium (100%)
4 3350 bp 34.45 1.00 55.07
done Jill Banfield (11/15/12)
ACD18_184 ACD18_3910.3311.23
Species: uncultured bacterium (100%)
2 3351 bp 33.69 1.00 83.89
done Jill Banfield (11/15/12)
ACD18_111 ACD18_155115.3404.7
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
3 3438 bp 31.68 1.00 91.27
done Jill Banfield (11/15/12)
ACD18_114 ACD18_103789.3452.5
Species: uncultured bacterium (100%)
3 3486 bp 30.92 1.00 57.83
done Jill Banfield (11/15/12)
ACD18_107 ACD18_232411.3474.6
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 3508 bp 29.62 1.00 83.30
done Jill Banfield (11/15/12)
ACD18_171 ACD18_3116.3486.21
Species: uncultured bacterium (100%)
4 3532 bp 34.23 1.00 88.76
done Jill Banfield (11/15/12)
ACD18_24 ACD18_118085.3572.5
Species: uncultured bacterium (100%)
5 3606 bp 30.48 1.00 88.94
done Jill Banfield (11/15/12)
ACD18_157 ACD18_117225.3584.5
Species: uncultured bacterium (100%)
3 3618 bp 30.13 1.00 67.99
done Jill Banfield (11/15/12)
ACD18_9 ACD18_16434.3624.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (83.33%)
6 3664 bp 31.25 1.00 73.77
done Jill Banfield (11/15/12)
ACD18_97 ACD18_2585.3696.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
5 3736 bp 33.86 1.00 88.57
done Jill Banfield (11/15/12)
ACD18_14 ACD18_3787.3857.20
Species: uncultured bacterium (100%)
4 3897 bp 33.69 1.00 78.83
done Jill Banfield (11/15/12)
ACD18_180 ACD18_118882.3866.6
Species: uncultured bacterium (100%)
2 3900 bp 35.41 1.00 65.54
done Jill Banfield (11/15/12)
ACD18_151 ACD18_811.3885.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 3931 bp 28.62 1.00 69.22
done Jill Banfield (11/15/12)
ACD18_81 ACD18_237766.4003.4
Species: uncultured bacterium (50%)
6 4037 bp 29.95 1.00 77.51
done Jill Banfield (11/15/12)
ACD18_68 ACD18_35665.4021.5
Species: uncultured bacterium (100%)
2 4055 bp 33.76 1.00 39.51
done Jill Banfield (11/15/12)
ACD18_62 ACD18_4449.4073.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 4113 bp 31.36 1.00 64.77
done Jill Banfield (11/15/12)
ACD18_66 ACD18_23735.4126.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
6 4166 bp 31.57 1.00 98.58
done Jill Banfield (11/15/12)
ACD18_99 ACD18_82084.4148.5
Species: uncultured bacterium (83.33%)
6 4182 bp 27.52 1.00 78.48
done Jill Banfield (11/15/12)
ACD18_121 ACD18_2351.4237.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 4283 bp 33.64 1.00 90.50
done Jill Banfield (11/15/12)
ACD18_40 ACD18_241.4324.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
6 4370 bp 31.24 1.00 84.99
done Jill Banfield (11/15/12)
ACD18_168 ACD18_354327.4380.4
Species: RIFOXYA2_FULL_OD1_Magasanikbacteria_44_8_curated (50%)
2 4414 bp 38.17 1.00 94.81
done Jill Banfield (11/15/12)
ACD18_135 ACD18_111108.4419.5
Species: uncultured bacterium (57.14%)
7 4453 bp 31.30 1.00 94.18
done Jill Banfield (11/15/12)
Displaying items 51-100 of 188 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.