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ACD18

Rifle_ACD_RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated_32_1
In projects: Rifle_ACD  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated  →  Magasanikbacteria  →  Parcubacteria  →  Bacteria

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 43.39 Kbp Bin length: 1.28 Mbp GC content: 31.95 %
Contigs count: 188 Features count: 1286 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38

Description

OD1

Displaying items 101-150 of 188 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ACD18_90 ACD18_63338.4447.4
Species: uncultured bacterium (100%)
4 4481 bp 33.81 1.00 71.37
done Jill Banfield (11/15/12)
ACD18_54 ACD18_230.4448.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
4 4488 bp 30.79 1.00 95.05
done Jill Banfield (11/15/12)
ACD18_33 ACD18_1774.4492.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 4532 bp 30.91 1.00 95.19
done Jill Banfield (11/15/12)
ACD18_154 ACD18_149.4560.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 4606 bp 32.46 1.00 97.83
done Jill Banfield (11/15/12)
ACD18_174 ACD18_10983.4596.19
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
2 4636 bp 33.69 1.00 96.23
done Jill Banfield (11/15/12)
ACD18_118 ACD18_1610.4648.22
Species: uncultured bacterium (71.43%)
7 4694 bp 28.38 1.00 94.40
done Jill Banfield (11/15/12)
ACD18_7 ACD18_899.4660.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
7 4706 bp 31.43 1.00 81.98
done Jill Banfield (11/15/12)
ACD18_51 ACD18_3123.4790.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 4836 bp 31.12 1.00 94.73
done Jill Banfield (11/15/12)
ACD18_8 ACD18_60.4906.23
Species: uncultured bacterium (75%)
8 4952 bp 29.89 1.00 91.11
done Jill Banfield (11/15/12)
ACD18_149 ACD18_2975.4908.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 4954 bp 31.91 1.00 86.66
done Jill Banfield (11/15/12)
ACD18_19 ACD18_8854.4932.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 4972 bp 34.79 1.00 84.65
done Jill Banfield (11/15/12)
ACD18_126 ACD18_9324.4953.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 4993 bp 33.23 1.00 85.50
done Jill Banfield (11/15/12)
ACD18_15 ACD18_3062.4996.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 5042 bp 30.35 1.00 92.70
done Jill Banfield (11/15/12)
ACD18_94 ACD18_3772.5116.20
Species: uncultured bacterium (60%)
5 5156 bp 34.91 1.00 72.50
done Jill Banfield (11/15/12)
ACD18_93 ACD18_6434.5280.22
Species: uncultured bacterium (50%)
6 5320 bp 28.80 1.00 82.39
done Jill Banfield (11/15/12)
ACD18_44 ACD18_3480.5304.5
Species: uncultured bacterium (100%)
7 5338 bp 30.74 1.00 96.16
done Jill Banfield (11/15/12)
ACD18_110 ACD18_1193.5388.23
Species: uncultured bacterium (50%)
6 5428 bp 31.41 1.00 98.43
done Jill Banfield (11/15/12)
ACD18_150 ACD18_181033.5471.5
Species: uncultured bacterium (75%)
4 5505 bp 29.61 1.00 75.15
done Jill Banfield (11/15/12)
ACD18_145 ACD18_5212.5553.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 5599 bp 31.81 1.00 88.41
done Jill Banfield (11/15/12)
ACD18_67 ACD18_321.5596.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 5636 bp 33.16 1.00 85.33
done Jill Banfield (11/15/12)
ACD18_41 ACD18_425.5690.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (85.71%)
7 5730 bp 32.84 1.00 96.18
done Jill Banfield (11/15/12)
ACD18_69 ACD18_39129.5736.6
Species: uncultured bacterium (87.5%)
8 5770 bp 34.35 1.00 71.07
done Jill Banfield (11/15/12)
ACD18_167 ACD18_1180.5731.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (83.33%)
6 5771 bp 34.69 1.00 95.29
done Jill Banfield (11/15/12)
ACD18_140 ACD18_176426.5817.6
Species: uncultured bacterium (57.14%)
7 5851 bp 27.14 1.00 96.70
done Jill Banfield (11/15/12)
ACD18_117 ACD18_1038.5864.24
Species: uncultured bacterium (80%)
5 5904 bp 30.74 1.00 83.38
done Jill Banfield (11/15/12)
ACD18_186 ACD18_2011.5931.24
Species: uncultured bacterium (100%)
4 5971 bp 35.40 1.00 82.75
done Jill Banfield (11/15/12)
ACD18_82 ACD18_7063.5958.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
6 5998 bp 31.61 1.00 87.08
done Jill Banfield (11/15/12)
ACD18_6 ACD18_217025.5997.5
Species: uncultured bacterium (100%)
7 6031 bp 32.37 1.00 64.12
done Jill Banfield (11/15/12)
ACD18_56 ACD18_8207.6123.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 6163 bp 30.52 1.00 92.73
done Jill Banfield (11/15/12)
ACD18_12 ACD18_1245.6149.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 6189 bp 32.07 1.00 85.46
done Jill Banfield (11/15/12)
ACD18_70 ACD18_12940.6192.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 6232 bp 33.01 1.00 79.19
done Jill Banfield (11/15/12)
ACD18_28 ACD18_544.6300.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 6340 bp 28.58 1.00 57.82
done Jill Banfield (11/15/12)
ACD18_26 ACD18_459.6426.19
Species: uncultured bacterium (100%)
4 6466 bp 35.26 1.00 93.21
done Jill Banfield (11/15/12)
ACD18_139 ACD18_1056.6448.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 6488 bp 34.03 1.00 92.15
done Jill Banfield (11/15/12)
ACD18_38 ACD18_41.6488.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (88.89%)
9 6528 bp 32.29 1.00 73.99
done Jill Banfield (11/15/12)
ACD18_159 ACD18_10029.6640.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (77.78%)
9 6686 bp 30.93 1.00 66.77
done Jill Banfield (11/15/12)
ACD18_128 ACD18_10851.6655.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
6 6695 bp 32.49 1.00 91.05
done Jill Banfield (11/15/12)
ACD18_76 ACD18_2950.6737.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (87.5%)
8 6783 bp 29.51 1.00 88.77
done Jill Banfield (11/15/12)
ACD18_132 ACD18_1539.6751.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 6797 bp 30.66 1.00 92.11
done Jill Banfield (11/15/12)
ACD18_78 ACD18_580.6818.23
Species: uncultured bacterium (100%)
6 6858 bp 31.58 1.00 93.48
done Jill Banfield (11/15/12)
ACD18_50 ACD18_361.7203.23
Species: uncultured bacterium (55.56%)
9 7243 bp 30.10 1.00 81.43
done Jill Banfield (11/15/12)
ACD18_79 ACD18_11569.7448.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (54.55%)
11 7488 bp 33.44 1.00 72.32
done Jill Banfield (11/15/12)
ACD18_115 ACD18_67308.7508.5
Species: uncultured bacterium (85.71%)
7 7542 bp 31.65 1.00 94.03
done Jill Banfield (11/15/12)
ACD18_100 ACD18_573.7598.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (81.82%)
11 7638 bp 34.07 1.00 74.12
done Jill Banfield (11/15/12)
ACD18_96 ACD18_1277.7831.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (77.78%)
9 7871 bp 30.78 1.00 93.69
done Jill Banfield (11/15/12)
ACD18_160 ACD18_8502.8395.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
9 8441 bp 30.45 1.00 64.19
done Jill Banfield (11/15/12)
ACD18_75 ACD18_1838.8437.22
Species: uncultured bacterium (100%)
6 8477 bp 32.48 1.00 85.11
done Jill Banfield (11/15/12)
ACD18_35 ACD18_1638.8791.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
11 8831 bp 31.04 1.00 83.87
done Jill Banfield (11/15/12)
ACD18_143 ACD18_8988.9158.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
4 9198 bp 32.56 1.00 92.56
done Jill Banfield (11/15/12)
ACD18_53 ACD18_19173.9357.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (55.56%)
9 9397 bp 31.93 1.00 77.29
done Jill Banfield (11/15/12)
Displaying items 101-150 of 188 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.