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ACD18

Rifle_ACD_RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated_32_1
In projects: Rifle_ACD  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated  →  Magasanikbacteria  →  Parcubacteria  →  Bacteria

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 43.39 Kbp Bin length: 1.28 Mbp GC content: 31.95 %
Contigs count: 188 Features count: 1286 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38

Description

OD1

Displaying items 51-100 of 188 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ACD18_76 ACD18_2950.6737.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (87.5%)
8 6783 bp 29.51 1.00 88.77
done Jill Banfield (11/15/12)
ACD18_128 ACD18_10851.6655.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
6 6695 bp 32.49 1.00 91.05
done Jill Banfield (11/15/12)
ACD18_159 ACD18_10029.6640.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (77.78%)
9 6686 bp 30.93 1.00 66.77
done Jill Banfield (11/15/12)
ACD18_38 ACD18_41.6488.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (88.89%)
9 6528 bp 32.29 1.00 73.99
done Jill Banfield (11/15/12)
ACD18_139 ACD18_1056.6448.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 6488 bp 34.03 1.00 92.15
done Jill Banfield (11/15/12)
ACD18_26 ACD18_459.6426.19
Species: uncultured bacterium (100%)
4 6466 bp 35.26 1.00 93.21
done Jill Banfield (11/15/12)
ACD18_28 ACD18_544.6300.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 6340 bp 28.58 1.00 57.82
done Jill Banfield (11/15/12)
ACD18_70 ACD18_12940.6192.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 6232 bp 33.01 1.00 79.19
done Jill Banfield (11/15/12)
ACD18_12 ACD18_1245.6149.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 6189 bp 32.07 1.00 85.46
done Jill Banfield (11/15/12)
ACD18_56 ACD18_8207.6123.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 6163 bp 30.52 1.00 92.73
done Jill Banfield (11/15/12)
ACD18_6 ACD18_217025.5997.5
Species: uncultured bacterium (100%)
7 6031 bp 32.37 1.00 64.12
done Jill Banfield (11/15/12)
ACD18_82 ACD18_7063.5958.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
6 5998 bp 31.61 1.00 87.08
done Jill Banfield (11/15/12)
ACD18_186 ACD18_2011.5931.24
Species: uncultured bacterium (100%)
4 5971 bp 35.40 1.00 82.75
done Jill Banfield (11/15/12)
ACD18_117 ACD18_1038.5864.24
Species: uncultured bacterium (80%)
5 5904 bp 30.74 1.00 83.38
done Jill Banfield (11/15/12)
ACD18_140 ACD18_176426.5817.6
Species: uncultured bacterium (57.14%)
7 5851 bp 27.14 1.00 96.70
done Jill Banfield (11/15/12)
ACD18_167 ACD18_1180.5731.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (83.33%)
6 5771 bp 34.69 1.00 95.29
done Jill Banfield (11/15/12)
ACD18_69 ACD18_39129.5736.6
Species: uncultured bacterium (87.5%)
8 5770 bp 34.35 1.00 71.07
done Jill Banfield (11/15/12)
ACD18_41 ACD18_425.5690.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (85.71%)
7 5730 bp 32.84 1.00 96.18
done Jill Banfield (11/15/12)
ACD18_67 ACD18_321.5596.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 5636 bp 33.16 1.00 85.33
done Jill Banfield (11/15/12)
ACD18_145 ACD18_5212.5553.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 5599 bp 31.81 1.00 88.41
done Jill Banfield (11/15/12)
ACD18_150 ACD18_181033.5471.5
Species: uncultured bacterium (75%)
4 5505 bp 29.61 1.00 75.15
done Jill Banfield (11/15/12)
ACD18_110 ACD18_1193.5388.23
Species: uncultured bacterium (50%)
6 5428 bp 31.41 1.00 98.43
done Jill Banfield (11/15/12)
ACD18_44 ACD18_3480.5304.5
Species: uncultured bacterium (100%)
7 5338 bp 30.74 1.00 96.16
done Jill Banfield (11/15/12)
ACD18_93 ACD18_6434.5280.22
Species: uncultured bacterium (50%)
6 5320 bp 28.80 1.00 82.39
done Jill Banfield (11/15/12)
ACD18_94 ACD18_3772.5116.20
Species: uncultured bacterium (60%)
5 5156 bp 34.91 1.00 72.50
done Jill Banfield (11/15/12)
ACD18_15 ACD18_3062.4996.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 5042 bp 30.35 1.00 92.70
done Jill Banfield (11/15/12)
ACD18_126 ACD18_9324.4953.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 4993 bp 33.23 1.00 85.50
done Jill Banfield (11/15/12)
ACD18_19 ACD18_8854.4932.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 4972 bp 34.79 1.00 84.65
done Jill Banfield (11/15/12)
ACD18_149 ACD18_2975.4908.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 4954 bp 31.91 1.00 86.66
done Jill Banfield (11/15/12)
ACD18_8 ACD18_60.4906.23
Species: uncultured bacterium (75%)
8 4952 bp 29.89 1.00 91.11
done Jill Banfield (11/15/12)
ACD18_51 ACD18_3123.4790.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 4836 bp 31.12 1.00 94.73
done Jill Banfield (11/15/12)
ACD18_7 ACD18_899.4660.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
7 4706 bp 31.43 1.00 81.98
done Jill Banfield (11/15/12)
ACD18_118 ACD18_1610.4648.22
Species: uncultured bacterium (71.43%)
7 4694 bp 28.38 1.00 94.40
done Jill Banfield (11/15/12)
ACD18_174 ACD18_10983.4596.19
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
2 4636 bp 33.69 1.00 96.23
done Jill Banfield (11/15/12)
ACD18_154 ACD18_149.4560.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 4606 bp 32.46 1.00 97.83
done Jill Banfield (11/15/12)
ACD18_33 ACD18_1774.4492.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 4532 bp 30.91 1.00 95.19
done Jill Banfield (11/15/12)
ACD18_54 ACD18_230.4448.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
4 4488 bp 30.79 1.00 95.05
done Jill Banfield (11/15/12)
ACD18_90 ACD18_63338.4447.4
Species: uncultured bacterium (100%)
4 4481 bp 33.81 1.00 71.37
done Jill Banfield (11/15/12)
ACD18_135 ACD18_111108.4419.5
Species: uncultured bacterium (57.14%)
7 4453 bp 31.30 1.00 94.18
done Jill Banfield (11/15/12)
ACD18_168 ACD18_354327.4380.4
Species: RIFOXYA2_FULL_OD1_Magasanikbacteria_44_8_curated (50%)
2 4414 bp 38.17 1.00 94.81
done Jill Banfield (11/15/12)
ACD18_40 ACD18_241.4324.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
6 4370 bp 31.24 1.00 84.99
done Jill Banfield (11/15/12)
ACD18_121 ACD18_2351.4237.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 4283 bp 33.64 1.00 90.50
done Jill Banfield (11/15/12)
ACD18_99 ACD18_82084.4148.5
Species: uncultured bacterium (83.33%)
6 4182 bp 27.52 1.00 78.48
done Jill Banfield (11/15/12)
ACD18_66 ACD18_23735.4126.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
6 4166 bp 31.57 1.00 98.58
done Jill Banfield (11/15/12)
ACD18_62 ACD18_4449.4073.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 4113 bp 31.36 1.00 64.77
done Jill Banfield (11/15/12)
ACD18_68 ACD18_35665.4021.5
Species: uncultured bacterium (100%)
2 4055 bp 33.76 1.00 39.51
done Jill Banfield (11/15/12)
ACD18_81 ACD18_237766.4003.4
Species: uncultured bacterium (50%)
6 4037 bp 29.95 1.00 77.51
done Jill Banfield (11/15/12)
ACD18_151 ACD18_811.3885.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 3931 bp 28.62 1.00 69.22
done Jill Banfield (11/15/12)
ACD18_180 ACD18_118882.3866.6
Species: uncultured bacterium (100%)
2 3900 bp 35.41 1.00 65.54
done Jill Banfield (11/15/12)
ACD18_14 ACD18_3787.3857.20
Species: uncultured bacterium (100%)
4 3897 bp 33.69 1.00 78.83
done Jill Banfield (11/15/12)
Displaying items 51-100 of 188 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.