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ACD18

Rifle_ACD_RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated_32_1
In projects: Rifle_ACD  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated  →  Magasanikbacteria  →  Parcubacteria  →  Bacteria

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 43.39 Kbp Bin length: 1.28 Mbp GC content: 31.95 %
Contigs count: 188 Features count: 1286 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38

Description

OD1

Displaying items 101-150 of 188 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ACD18_97 ACD18_2585.3696.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
5 3736 bp 33.86 1.00 88.57
done Jill Banfield (11/15/12)
ACD18_9 ACD18_16434.3624.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (83.33%)
6 3664 bp 31.25 1.00 73.77
done Jill Banfield (11/15/12)
ACD18_157 ACD18_117225.3584.5
Species: uncultured bacterium (100%)
3 3618 bp 30.13 1.00 67.99
done Jill Banfield (11/15/12)
ACD18_24 ACD18_118085.3572.5
Species: uncultured bacterium (100%)
5 3606 bp 30.48 1.00 88.94
done Jill Banfield (11/15/12)
ACD18_171 ACD18_3116.3486.21
Species: uncultured bacterium (100%)
4 3532 bp 34.23 1.00 88.76
done Jill Banfield (11/15/12)
ACD18_107 ACD18_232411.3474.6
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 3508 bp 29.62 1.00 83.30
done Jill Banfield (11/15/12)
ACD18_114 ACD18_103789.3452.5
Species: uncultured bacterium (100%)
3 3486 bp 30.92 1.00 57.83
done Jill Banfield (11/15/12)
ACD18_111 ACD18_155115.3404.7
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
3 3438 bp 31.68 1.00 91.27
done Jill Banfield (11/15/12)
ACD18_184 ACD18_3910.3311.23
Species: uncultured bacterium (100%)
2 3351 bp 33.69 1.00 83.89
done Jill Banfield (11/15/12)
ACD18_84 ACD18_147591.3316.5
Species: uncultured bacterium (100%)
4 3350 bp 34.45 1.00 55.07
done Jill Banfield (11/15/12)
ACD18_133 ACD18_217180.3300.5
Species: uncultured bacterium (80%)
5 3334 bp 29.12 1.00 69.56
done Jill Banfield (11/15/12)
ACD18_155 ACD18_562.3279.24
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 3319 bp 31.43 1.00 82.89
done Jill Banfield (11/15/12)
ACD18_161 ACD18_1025.3163.22
Species: uncultured bacterium (80%)
5 3203 bp 32.63 1.00 82.70
done Jill Banfield (11/15/12)
ACD18_72 ACD18_61444.3138.6
Species: uncultured bacterium (100%)
4 3172 bp 29.26 1.00 95.43
done Jill Banfield (11/15/12)
ACD18_164 ACD18_233382.3131.6
Species: uncultured bacterium (100%)
5 3165 bp 29.57 1.00 77.82
done Jill Banfield (11/15/12)
ACD18_146 ACD18_1959.3108.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 3148 bp 34.91 1.00 90.91
done Jill Banfield (11/15/12)
ACD18_130 ACD18_297594.3094.5
Class: Magasanikbacteria (66.67%)
3 3128 bp 31.46 1.00 80.66
done Jill Banfield (11/15/12)
ACD18_16 ACD18_1979.3067.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 3113 bp 30.49 1.00 90.59
done Jill Banfield (11/15/12)
ACD18_112 ACD18_1200.3006.21
Species: uncultured bacterium (66.67%)
3 3046 bp 30.86 1.00 55.15
done Jill Banfield (11/15/12)
ACD18_158 ACD18_39124.2976.6
Species: uncultured bacterium (100%)
3 3010 bp 27.04 1.00 93.09
done Jill Banfield (11/15/12)
ACD18_127 ACD18_3962.2951.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
3 2997 bp 29.20 1.00 62.96
done Jill Banfield (11/15/12)
ACD18_183 ACD18_4624.2955.17
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
1 2995 bp 38.40 1.00 99.97
done Jill Banfield (11/15/12)
ACD18_153 ACD18_305239.2954.6
Species: uncultured bacterium (66.67%)
3 2988 bp 32.76 1.00 99.40
done Jill Banfield (11/15/12)
ACD18_116 ACD18_13308.2953.6
Species: uncultured bacterium (100%)
3 2987 bp 29.90 1.00 91.60
done Jill Banfield (11/15/12)
ACD18_178 ACD18_208343.2919.5
Species: uncultured bacterium (100%)
7 2953 bp 32.07 1.00 77.62
done Jill Banfield (11/15/12)
ACD18_170 ACD18_69666.2917.5
Species: uncultured bacterium (100%)
3 2951 bp 32.29 1.00 63.23
done Jill Banfield (11/15/12)
ACD18_32 ACD18_24801.2867.5
Species: uncultured bacterium (100%)
4 2901 bp 33.44 1.00 98.45
done Jill Banfield (11/15/12)
ACD18_172 ACD18_93916.2863.6
Species: uncultured bacterium (100%)
3 2897 bp 32.17 1.00 78.08
done Jill Banfield (11/15/12)
ACD18_147 ACD18_1649.2800.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 2846 bp 31.69 1.00 71.47
done Jill Banfield (11/15/12)
ACD18_31 ACD18_87053.2788.6
Species: uncultured bacterium (100%)
3 2822 bp 29.20 1.00 74.20
done Jill Banfield (11/15/12)
ACD18_156 ACD18_79175.2781.4
Species: uncultured bacterium (50%)
2 2815 bp 33.14 1.00 75.45
done Jill Banfield (11/15/12)
ACD18_20 ACD18_3082.2757.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 2803 bp 27.54 1.00 80.06
done Jill Banfield (11/15/12)
ACD18_123 ACD18_380992.2756.5
Species: R_OD1_Magasanikbacteria_44_11 (50%)
2 2790 bp 27.17 1.00 69.89
done Jill Banfield (11/15/12)
ACD18_58 ACD18_1753.2742.23
Species: uncultured bacterium (75%)
4 2788 bp 30.24 1.00 98.35
done Jill Banfield (11/15/12)
ACD18_98 ACD18_1639.2740.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (80%)
5 2786 bp 29.50 1.00 83.78
done Jill Banfield (11/15/12)
ACD18_165 ACD18_155829.2694.4
Species: uncultured bacterium (100%)
1 2728 bp 33.14 1.00 10.34
done Jill Banfield (11/15/12)
ACD18_144 ACD18_193976.2688.5
Species: uncultured bacterium (66.67%)
3 2722 bp 31.63 1.00 79.46
done Jill Banfield (11/15/12)
ACD18_182 ACD18_6286.2675.20
Species: uncultured bacterium (100%)
2 2715 bp 36.46 1.00 95.47
done Jill Banfield (11/15/12)
ACD18_61 ACD18_101906.2675.5
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 2709 bp 34.37 1.00 90.59
done Jill Banfield (11/15/12)
ACD18_169 ACD18_123462.2626.4
Species: uncultured bacterium (100%)
1 2660 bp 32.03 1.00 52.78
done Jill Banfield (11/15/12)
ACD18_25 ACD18_24595.2617.5
Species: uncultured bacterium (100%)
3 2651 bp 30.33 1.00 78.42
done Jill Banfield (11/15/12)
ACD18_63 ACD18_138274.2613.5
Species: uncultured bacterium (100%)
4 2647 bp 31.36 1.00 51.00
done Jill Banfield (11/15/12)
ACD18_95 ACD18_252955.2603.4
Species: uncultured bacterium (100%)
3 2637 bp 32.61 1.00 37.54
done Jill Banfield (11/15/12)
ACD18_138 ACD18_89878.2590.5
Species: uncultured bacterium (66.67%)
3 2624 bp 30.41 1.00 85.06
done Jill Banfield (11/15/12)
ACD18_13 ACD18_73881.2575.5
Species: uncultured bacterium (100%)
4 2609 bp 32.31 1.00 94.86
done Jill Banfield (11/15/12)
ACD18_129 ACD18_62117.2566.5
Species: uncultured bacterium (100%)
4 2600 bp 29.92 1.00 82.27
done Jill Banfield (11/15/12)
ACD18_22 ACD18_23361.2552.17
Species: uncultured bacterium (100%)
4 2592 bp 32.52 1.00 51.27
done Jill Banfield (11/15/12)
ACD18_152 ACD18_269219.2551.5
Species: uncultured bacterium (100%)
4 2585 bp 30.91 1.00 73.11
done Jill Banfield (11/15/12)
ACD18_179 ACD18_3421.2544.21
Species: uncultured bacterium (100%)
3 2584 bp 31.70 1.00 89.05
done Jill Banfield (11/15/12)
ACD18_175 ACD18_31582.2459.5
Species: uncultured bacterium (100%)
2 2493 bp 33.61 1.00 96.87
done Jill Banfield (11/15/12)
Displaying items 101-150 of 188 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.