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SCNPILOT_CONT_500_BF_Rhizobiales_63_8

In projects: SCNPILOT_CONT_500_BF

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

from TS-ESOM, split bin

Displaying items 251-300 of 424 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_12046
Order: Rhizobiales (88.89%)
9 6877 bp 61.99 6.69 82.75
SCNpilot_cont_500_bf_scaffold_10683
Genus: Bradyrhizobium (50%)
8 7310 bp 64.83 6.67 79.33
SCNpilot_cont_500_bf_scaffold_8119
Order: Rhizobiales (100%)
8 5189 bp 64.19 6.65 93.43
SCNpilot_cont_500_bf_scaffold_8044
Order: Rhizobiales (100%)
7 5224 bp 64.41 6.65 82.70
SCNpilot_cont_500_bf_scaffold_8001
Species: Rhodopseudomonas palustris (50%)
10 9562 bp 64.20 6.64 95.03
SCNpilot_cont_500_bf_scaffold_24966
Order: Rhizobiales (75%)
8 5620 bp 63.56 6.63 77.24
SCNpilot_cont_500_bf_scaffold_8334
Order: Rhizobiales (94.12%)
17 10217 bp 63.03 6.61 91.55
SCNpilot_cont_500_bf_scaffold_5260
Genus: Bradyrhizobium (62.5%)
8 9544 bp 65.71 6.60 87.42
SCNpilot_cont_500_bf_scaffold_9489
Order: Rhizobiales (80%)
10 7729 bp 66.48 6.60 90.01
SCNpilot_cont_500_bf_scaffold_7613
Species: Afipia broomeae (50%)
4 5460 bp 66.94 6.59 95.22
SCNpilot_cont_500_bf_scaffold_9421
Species: Rhodopseudomonas palustris (62.5%)
8 6793 bp 65.94 6.59 88.59
SCNpilot_cont_500_bf_scaffold_10351
Order: Rhizobiales (75%)
8 9235 bp 64.22 6.58 91.35
SCNpilot_cont_500_bf_scaffold_12635
Genus: Mesorhizobium (53.85%)
13 7465 bp 63.16 6.56 91.43
SCNpilot_cont_500_bf_scaffold_13129
Order: Rhizobiales (100%)
9 6136 bp 64.13 6.56 80.18
SCNpilot_cont_500_bf_scaffold_6671
Order: Rhizobiales (100%)
13 9957 bp 64.39 6.50 87.56
SCNpilot_cont_500_bf_scaffold_23559
Genus: Bradyrhizobium (83.33%)
6 5919 bp 61.97 6.50 65.28
SCNpilot_cont_500_bf_scaffold_13902
Genus: Bradyrhizobium (50%)
6 5767 bp 64.68 6.50 77.15
SCNpilot_cont_500_bf_scaffold_6450
Order: Rhizobiales (85%)
20 14371 bp 63.65 6.49 86.40
SCNpilot_cont_500_bf_scaffold_5500
Genus: Bradyrhizobium (50%)
8 8912 bp 66.15 6.48 88.97
SCNpilot_cont_500_bf_scaffold_3692
Genus: Mesorhizobium (62.5%)
8 9767 bp 61.99 6.48 97.65
SCNpilot_cont_500_bf_scaffold_3376
Genus: Bradyrhizobium (54.55%)
11 10572 bp 64.98 6.46 89.25
SCNpilot_cont_500_bf_scaffold_20949
Species: Rhodopseudomonas palustris (50%)
8 8946 bp 63.37 6.46 93.16
SCNpilot_cont_500_bf_scaffold_21806
Species: Afipia sp. P52-10 (50%)
4 5028 bp 61.85 6.41 94.81
SCNpilot_cont_500_bf_scaffold_17378
Genus: Bradyrhizobium (60%)
5 5651 bp 60.79 6.41 79.90
SCNpilot_cont_500_bf_scaffold_16782
Genus: Bradyrhizobium (75%)
4 5349 bp 64.33 6.40 84.86
SCNpilot_cont_500_bf_scaffold_5518
Order: Rhizobiales (100%)
5 7039 bp 65.00 6.39 94.23
SCNpilot_cont_500_bf_scaffold_6239
Genus: Bradyrhizobium (57.14%)
7 7275 bp 62.98 6.39 83.42
SCNpilot_cont_500_bf_scaffold_12642
Genus: Bradyrhizobium (60%)
5 5176 bp 63.06 6.38 81.43
SCNpilot_cont_500_bf_scaffold_13029
Order: Rhizobiales (93.33%)
15 12513 bp 63.14 6.37 80.68
SCNpilot_cont_500_bf_scaffold_4769
Phylum: Proteobacteria (62.5%)
8 7971 bp 60.36 6.34 85.59
SCNpilot_cont_500_bf_scaffold_16028
Genus: Bradyrhizobium (50%)
12 10128 bp 64.77 6.34 79.30
SCNpilot_cont_500_bf_scaffold_6795
Genus: Bradyrhizobium (50%)
8 9227 bp 65.45 6.34 92.57
SCNpilot_cont_500_bf_scaffold_8733
Order: Rhizobiales (80%)
10 5867 bp 63.56 6.31 81.25
SCNpilot_cont_500_bf_scaffold_20647
Order: Rhizobiales (100%)
7 5512 bp 66.62 6.30 91.06
SCNpilot_cont_500_bf_scaffold_23764
Genus: Bradyrhizobium (57.14%)
7 8337 bp 62.70 6.30 88.59
SCNpilot_cont_500_bf_scaffold_4640
Species: Bradyrhizobium sp. DFCI-1 (81.82%)
11 9012 bp 64.80 6.30 97.67
SCNpilot_cont_500_bf_scaffold_6847
Order: Rhizobiales (80%)
5 5913 bp 64.15 6.30 88.43
SCNpilot_cont_500_bf_scaffold_19291
Genus: Bradyrhizobium (60%)
5 5318 bp 63.82 6.30 89.98
SCNpilot_cont_500_bf_scaffold_5315
Order: Rhizobiales (50%)
12 9721 bp 61.07 6.28 92.37
SCNpilot_cont_500_bf_scaffold_23607
Genus: Bradyrhizobium (75%)
8 6134 bp 66.30 6.28 92.48
SCNpilot_cont_500_bf_scaffold_16961
Order: Rhizobiales (100%)
7 6459 bp 66.17 6.27 90.48
SCNpilot_cont_500_bf_scaffold_17864
Genus: Bradyrhizobium (60%)
5 5225 bp 65.21 6.27 79.35
SCNpilot_cont_500_bf_scaffold_4830
Order: Rhizobiales (100%)
10 10848 bp 65.41 6.27 95.19
SCNpilot_cont_500_bf_scaffold_9445
Order: Rhizobiales (100%)
11 6261 bp 63.68 6.27 77.14
SCNpilot_cont_500_bf_scaffold_7237
Genus: Bradyrhizobium (53.85%)
13 14598 bp 63.32 6.27 91.37
SCNpilot_cont_500_bf_scaffold_7269
Order: Rhizobiales (85.71%)
7 6143 bp 64.72 6.27 92.64
SCNpilot_cont_500_bf_scaffold_13174
Order: Rhizobiales (50%)
6 5315 bp 59.96 6.26 84.95
SCNpilot_cont_500_bf_scaffold_7501
Species: Rhodopseudomonas palustris (50%)
6 5526 bp 65.02 6.24 89.03
SCNpilot_cont_500_bf_scaffold_10676
Class: Alphaproteobacteria (85.71%)
7 6342 bp 64.16 6.23 97.63
SCNpilot_cont_500_bf_scaffold_23392
Species: Rhodopseudomonas palustris (50%)
8 5621 bp 64.17 6.23 79.84
Displaying items 251-300 of 424 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.