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dasL3_133_000G1_concoct_15_fa

L3_133_000G1_public_Clostridiales_42_14
In projects: L3_133_000G1_public

Consensus taxonomy: Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Metagenomic Context

Parent: L3_133_000G1_public_UNK

Properties

Avg. coverage: 13.75 Longest contig: 213.94 Kbp Bin length: 7.12 Mbp GC content: 41.60 %
Contigs count: 134 Features count: 6075 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 14 / 38 MC: 1
Displaying items 51-100 of 134 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_133_000G1_scaffold_436
Order: Clostridiales (59.57%)
47 62444 bp 42.43 15.41 87.83
L3_133_000G1_scaffold_35
Order: Clostridiales (77.16%)
162 186359 bp 41.02 12.86 87.86
L3_133_000G1_scaffold_1466
Order: Clostridiales (76.92%)
26 26355 bp 43.09 14.48 88.05
L3_133_000G1_scaffold_1108
Order: Clostridiales (76.67%)
30 33319 bp 41.33 14.20 88.09
L3_133_000G1_scaffold_1007
Order: Clostridiales (56.76%)
37 35936 bp 41.43 11.74 88.11
L3_133_000G1_scaffold_358
Order: Clostridiales (80.33%)
61 70142 bp 42.86 12.98 88.21
L3_133_000G1_scaffold_83
Order: Clostridiales (75%)
108 136551 bp 41.76 12.79 88.27
L3_133_000G1_scaffold_795
Order: Clostridiales (70%)
40 42855 bp 43.70 13.52 88.45
L3_133_000G1_scaffold_669
Order: Clostridiales (73.17%)
41 48307 bp 42.00 12.54 88.60
L3_133_000G1_scaffold_1307
Order: Clostridiales (66.67%)
24 29256 bp 41.63 13.90 88.64
L3_133_000G1_scaffold_21
Order: Clostridiales (63.11%)
206 206787 bp 42.23 14.38 88.64
L3_133_000G1_scaffold_1158
Order: Clostridiales (70.37%)
27 31990 bp 42.09 15.14 88.66
L3_133_000G1_scaffold_63
Order: Clostridiales (64.57%)
127 151786 bp 41.66 15.74 88.70
L3_133_000G1_scaffold_548
Order: Clostridiales (88.64%)
44 54385 bp 42.37 12.89 88.71
L3_133_000G1_scaffold_114
Order: Clostridiales (76.32%)
114 121341 bp 39.81 11.50 88.77
L3_133_000G1_scaffold_5593
Order: Clostridiales (60%)
5 7426 bp 44.22 12.73 88.84
L3_133_000G1_scaffold_522
Order: Clostridiales (71.43%)
35 56250 bp 42.22 15.13 88.93
L3_133_000G1_scaffold_723
Order: Clostridiales (74.19%)
31 46259 bp 42.85 14.48 88.99
L3_133_000G1_scaffold_263
Order: Clostridiales (71.21%)
66 82580 bp 40.42 12.38 89.14
L3_133_000G1_scaffold_1104
Order: Clostridiales (75.76%)
33 33370 bp 43.17 12.58 89.14
L3_133_000G1_scaffold_492
Order: Clostridiales (82%)
50 57889 bp 42.95 13.34 89.22
L3_133_000G1_scaffold_4634
Order: Clostridiales (50%)
10 8876 bp 43.71 13.74 89.23
L3_133_000G1_scaffold_1458
Order: Clostridiales (89.47%)
19 26456 bp 41.64 14.89 89.27
L3_133_000G1_scaffold_1253
Order: Clostridiales (78.57%)
28 30057 bp 43.23 12.29 89.28
L3_133_000G1_scaffold_164
Order: Clostridiales (73.17%)
82 104902 bp 42.92 12.93 89.30
L3_133_000G1_scaffold_709
Order: Clostridiales (57.14%)
35 46808 bp 42.51 12.99 89.33
L3_133_000G1_scaffold_10349
Order: Clostridiales (50%)
4 3811 bp 42.48 14.76 89.35
L3_133_000G1_scaffold_34
Order: Clostridiales (63.78%)
127 187250 bp 41.11 12.62 89.36
L3_133_000G1_scaffold_8229
Species: Catonella morbi (50%)
4 4943 bp 43.58 14.75 89.46
L3_133_000G1_scaffold_73
Order: Clostridiales (61.15%)
139 142999 bp 42.81 15.36 89.48
L3_133_000G1_scaffold_26
Order: Clostridiales (64.79%)
142 198831 bp 41.73 15.95 89.56
L3_133_000G1_scaffold_820
Order: Clostridiales (71.05%)
38 41766 bp 41.96 13.88 89.57
L3_133_000G1_scaffold_1219
Order: Clostridiales (57.14%)
28 30621 bp 42.73 13.70 89.71
L3_133_000G1_scaffold_37
Order: Clostridiales (60.13%)
158 181976 bp 42.57 13.66 89.73
L3_133_000G1_scaffold_70
Order: Clostridiales (65.42%)
107 144509 bp 42.15 15.32 89.81
L3_133_000G1_scaffold_139
Order: Clostridiales (75.49%)
102 113522 bp 41.67 12.29 89.83
L3_133_000G1_scaffold_7822
Order: Clostridiales (100%)
5 5214 bp 43.77 14.64 89.87
L3_133_000G1_scaffold_120
Order: Clostridiales (68.37%)
98 119453 bp 42.24 14.06 89.91
L3_133_000G1_scaffold_160
Order: Clostridiales (77.27%)
110 106206 bp 44.77 14.04 89.94
L3_133_000G1_scaffold_4452
Species: Treponema azotonutricium (62.5%)
8 9332 bp 41.89 13.39 90.11
L3_133_000G1_scaffold_4889
Order: Clostridiales (71.43%)
7 8446 bp 43.65 12.34 90.15
L3_133_000G1_scaffold_922
Phylum: Firmicutes (59.09%)
44 38475 bp 33.72 11.54 90.18
L3_133_000G1_scaffold_2847
Order: Clostridiales (66.67%)
15 14414 bp 39.31 11.69 90.20
L3_133_000G1_scaffold_376
Order: Clostridiales (66.04%)
53 68522 bp 43.64 14.39 90.23
L3_133_000G1_scaffold_54
Order: Clostridiales (61.44%)
153 165346 bp 42.06 15.50 90.27
L3_133_000G1_scaffold_214
Order: Clostridiales (77.5%)
80 92826 bp 42.17 14.28 90.34
L3_133_000G1_scaffold_3170
Species: Roseburia hominis (55.56%)
9 13046 bp 42.60 13.67 90.35
L3_133_000G1_scaffold_2810
Order: Clostridiales (70%)
10 14636 bp 42.20 14.39 90.41
L3_133_000G1_scaffold_588
Order: Clostridiales (86.67%)
45 52118 bp 44.36 15.31 90.45
L3_133_000G1_scaffold_1712
Order: Clostridiales (85.71%)
14 23017 bp 42.17 14.10 90.53
Displaying items 51-100 of 134 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.