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dasL3_133_000G1_concoct_15_fa

L3_133_000G1_public_Clostridiales_42_14
In projects: L3_133_000G1_public

Consensus taxonomy: Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Metagenomic Context

Parent: L3_133_000G1_public_UNK

Properties

Avg. coverage: 13.75 Longest contig: 213.94 Kbp Bin length: 7.12 Mbp GC content: 41.60 %
Contigs count: 134 Features count: 6075 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 14 / 38 MC: 1
Displaying items 1-50 of 134 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_133_000G1_scaffold_9639
Species: [Clostridium] papyrosolvens (100%)
1 4144 bp 42.28 10.90 99.98
L3_133_000G1_scaffold_199
Phylum: Firmicutes (58.44%)
77 94904 bp 33.34 12.52 95.42
L3_133_000G1_scaffold_509
Phylum: Firmicutes (50.98%)
51 56868 bp 36.02 14.26 95.06
L3_133_000G1_scaffold_1962
Order: Clostridiales (88.89%)
9 20421 bp 43.99 12.80 94.23
L3_133_000G1_scaffold_96
Order: Clostridiales (71.15%)
104 129151 bp 39.28 12.64 93.74
L3_133_000G1_scaffold_1727
Order: Clostridiales (71.43%)
14 22856 bp 42.54 12.01 93.70
L3_133_000G1_scaffold_454
Order: Clostridiales (77.27%)
44 60907 bp 42.68 15.65 93.53
L3_133_000G1_scaffold_1120
Order: Clostridiales (94.12%)
17 33064 bp 40.82 16.77 93.40
L3_133_000G1_scaffold_40
Order: Clostridiales (87.22%)
133 178677 bp 43.27 15.87 93.31
L3_133_000G1_scaffold_3379
Order: Clostridiales (60%)
10 12205 bp 44.55 14.02 93.01
L3_133_000G1_scaffold_1920
Order: Clostridiales (91.67%)
12 20941 bp 44.86 16.38 92.99
L3_133_000G1_scaffold_6808
Species: Hungatella hathewayi (60%)
5 6072 bp 44.93 15.34 92.89
L3_133_000G1_scaffold_9504
Species: Clostridium sp. KLE 1755 (66.67%)
3 4207 bp 36.06 11.69 92.35
L3_133_000G1_scaffold_366
Order: Clostridiales (76.47%)
51 69600 bp 41.86 13.01 92.08
L3_133_000G1_scaffold_1140
Order: Clostridiales (61.29%)
31 32542 bp 42.55 15.50 91.93
L3_133_000G1_scaffold_4422
Order: Clostridiales (80%)
5 9389 bp 45.54 12.49 91.86
L3_133_000G1_scaffold_2370
Order: Clostridiales (100%)
11 17221 bp 39.96 13.47 91.65
L3_133_000G1_scaffold_1065
Order: Clostridiales (83.33%)
24 34472 bp 42.61 12.09 91.42
L3_133_000G1_scaffold_1047
Order: Clostridiales (64.52%)
31 35079 bp 42.56 12.30 91.33
L3_133_000G1_scaffold_636
Order: Clostridiales (73.68%)
38 50058 bp 40.94 12.50 91.32
L3_133_000G1_scaffold_15
Order: Clostridiales (67.01%)
194 213938 bp 41.59 12.19 91.18
L3_133_000G1_scaffold_1268
Order: Clostridiales (64%)
25 29826 bp 43.74 12.44 91.10
L3_133_000G1_scaffold_785
Order: Clostridiales (73.08%)
26 43438 bp 41.81 11.82 91.07
L3_133_000G1_scaffold_24
Order: Clostridiales (71.43%)
147 202308 bp 42.67 13.86 91.04
L3_133_000G1_scaffold_1247
Order: Clostridiales (90.48%)
21 30146 bp 42.78 15.59 90.98
L3_133_000G1_scaffold_1100
Order: Clostridiales (79.31%)
29 33423 bp 43.19 12.37 90.93
L3_133_000G1_scaffold_1518
Order: Clostridiales (55.81%)
43 25533 bp 35.93 11.66 90.93
L3_133_000G1_scaffold_118
Order: Clostridiales (66.3%)
92 120553 bp 41.23 15.85 90.91
L3_133_000G1_scaffold_246
Order: Clostridiales (79.17%)
72 86076 bp 42.60 12.71 90.90
L3_133_000G1_scaffold_345
Order: Clostridiales (82.35%)
51 72080 bp 43.27 14.03 90.79
L3_133_000G1_scaffold_75
Order: Clostridiales (68.29%)
123 141949 bp 41.38 12.54 90.72
L3_133_000G1_scaffold_768
Order: Clostridiales (56.82%)
44 43912 bp 42.13 12.58 90.67
L3_133_000G1_scaffold_29
Order: Clostridiales (67.27%)
165 195528 bp 42.79 14.84 90.59
L3_133_000G1_scaffold_313
Order: Clostridiales (84.75%)
59 75074 bp 42.36 15.12 90.57
L3_133_000G1_scaffold_1712
Order: Clostridiales (85.71%)
14 23017 bp 42.17 14.10 90.53
L3_133_000G1_scaffold_588
Order: Clostridiales (86.67%)
45 52118 bp 44.36 15.31 90.45
L3_133_000G1_scaffold_2810
Order: Clostridiales (70%)
10 14636 bp 42.20 14.39 90.41
L3_133_000G1_scaffold_3170
Species: Roseburia hominis (55.56%)
9 13046 bp 42.60 13.67 90.35
L3_133_000G1_scaffold_214
Order: Clostridiales (77.5%)
80 92826 bp 42.17 14.28 90.34
L3_133_000G1_scaffold_54
Order: Clostridiales (61.44%)
153 165346 bp 42.06 15.50 90.27
L3_133_000G1_scaffold_376
Order: Clostridiales (66.04%)
53 68522 bp 43.64 14.39 90.23
L3_133_000G1_scaffold_2847
Order: Clostridiales (66.67%)
15 14414 bp 39.31 11.69 90.20
L3_133_000G1_scaffold_922
Phylum: Firmicutes (59.09%)
44 38475 bp 33.72 11.54 90.18
L3_133_000G1_scaffold_4889
Order: Clostridiales (71.43%)
7 8446 bp 43.65 12.34 90.15
L3_133_000G1_scaffold_4452
Species: Treponema azotonutricium (62.5%)
8 9332 bp 41.89 13.39 90.11
L3_133_000G1_scaffold_160
Order: Clostridiales (77.27%)
110 106206 bp 44.77 14.04 89.94
L3_133_000G1_scaffold_120
Order: Clostridiales (68.37%)
98 119453 bp 42.24 14.06 89.91
L3_133_000G1_scaffold_7822
Order: Clostridiales (100%)
5 5214 bp 43.77 14.64 89.87
L3_133_000G1_scaffold_139
Order: Clostridiales (75.49%)
102 113522 bp 41.67 12.29 89.83
L3_133_000G1_scaffold_70
Order: Clostridiales (65.42%)
107 144509 bp 42.15 15.32 89.81
Displaying items 1-50 of 134 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.