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SCN18_14_9_16_R1_B_Rhizobiales_65_9

In projects: SCN18_14_9_16_R1_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Extracted from SCN18_14_9_16_R1_B_abawaca_094

Displaying items 51-100 of 1208 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_14_9_16_R1_B_scaffold_2629
Order: Rhizobiales (83.33%)
12 9448 bp 66.84 9.26 95.61
SCN18_14_9_16_R1_B_scaffold_2918
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
12 9675 bp 66.10 9.47 87.75
SCN18_14_9_16_R1_B_scaffold_6826
Order: Rhizobiales (75%)
12 4162 bp 61.87 7.35 74.03
SCN18_14_9_16_R1_B_scaffold_3483
Genus: Mesorhizobium (66.67%)
12 10835 bp 65.42 8.08 94.17
SCN18_14_9_16_R1_B_scaffold_2184
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
12 10871 bp 64.21 10.02 89.72
SCN18_14_9_16_R1_B_scaffold_2697
Order: Rhizobiales (100%)
12 9226 bp 65.68 10.94 92.77
SCN18_14_9_16_R1_B_scaffold_3525
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (66.67%)
12 7445 bp 68.57 10.09 88.41
SCN18_14_9_16_R1_B_scaffold_3286
Order: Rhizobiales (100%)
12 13513 bp 66.05 8.90 87.01
SCN18_14_9_16_R1_B_scaffold_1735
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
12 12908 bp 65.18 9.13 90.55
SCN18_14_9_16_R1_B_scaffold_2241
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (100%)
12 10633 bp 68.80 9.86 96.66
SCN18_14_9_16_R1_B_scaffold_3566
Order: Rhizobiales (75%)
12 10523 bp 63.34 8.35 81.66
SCN18_14_9_16_R1_B_scaffold_4972
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (66.67%)
12 9140 bp 67.25 9.98 94.14
SCN18_14_9_16_R1_B_scaffold_2255
Order: Rhizobiales (83.33%)
12 10580 bp 65.38 9.85 85.86
SCN18_14_9_16_R1_B_scaffold_1773
Order: Rhizobiales (58.33%)
12 12668 bp 64.61 6.96 89.16
SCN18_14_9_16_R1_B_scaffold_3588
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
12 9852 bp 66.04 10.08 85.90
SCN18_14_9_16_R1_B_scaffold_2800
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (58.33%)
12 8968 bp 64.66 9.47 87.63
SCN18_14_9_16_R1_B_scaffold_3099
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (58.33%)
12 8302 bp 64.30 11.20 88.61
SCN18_14_9_16_R1_B_scaffold_2318
Order: Rhizobiales (91.67%)
12 10340 bp 68.43 9.63 92.64
SCN18_14_9_16_R1_B_scaffold_2588
Order: Rhizobiales (83.33%)
12 9542 bp 65.70 8.74 88.38
SCN18_14_9_16_R1_B_scaffold_1886
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (90.91%)
11 12143 bp 65.96 10.24 84.63
SCN18_14_9_16_R1_B_scaffold_2122
Order: Rhizobiales (72.73%)
11 11143 bp 63.85 8.87 85.24
SCN18_14_9_16_R1_B_scaffold_5985
Order: Rhizobiales (63.64%)
11 8163 bp 52.65 7.61 82.03
SCN18_14_9_16_R1_B_scaffold_2900
Order: Rhizobiales (90.91%)
11 8731 bp 65.51 10.75 92.33
SCN18_14_9_16_R1_B_scaffold_2409
Order: Rhizobiales (63.64%)
11 10034 bp 62.19 7.80 80.31
SCN18_14_9_16_R1_B_scaffold_2677
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
11 9309 bp 67.72 9.51 92.75
SCN18_14_9_16_R1_B_scaffold_3746
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (54.55%)
11 10640 bp 65.10 9.16 82.36
SCN18_14_9_16_R1_B_scaffold_3496
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (54.55%)
11 11448 bp 66.55 9.84 92.14
SCN18_14_9_16_R1_B_scaffold_2192
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (100%)
11 10821 bp 66.78 11.28 97.20
SCN18_14_9_16_R1_B_scaffold_2710
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (54.55%)
11 11236 bp 64.85 9.29 85.84
SCN18_14_9_16_R1_B_scaffold_3545
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (90.91%)
11 7409 bp 62.18 7.11 90.19
SCN18_14_9_16_R1_B_scaffold_2498
Order: Rhizobiales (100%)
11 9808 bp 63.92 9.10 90.17
SCN18_14_9_16_R1_B_scaffold_1764
Genus: Devosia (54.55%)
11 12710 bp 59.65 6.80 92.53
SCN18_14_9_16_R1_B_scaffold_4464
Order: Rhizobiales (63.64%)
11 6172 bp 59.12 7.00 85.50
SCN18_14_9_16_R1_B_scaffold_4218
Species: SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (72.73%)
11 6448 bp 62.78 9.05 64.53
SCN18_14_9_16_R1_B_scaffold_2783
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
11 9017 bp 66.15 10.65 92.19
SCN18_14_9_16_R1_B_scaffold_3863
Order: Rhizobiales (90.91%)
11 6945 bp 64.51 9.42 77.97
SCN18_14_9_16_R1_B_scaffold_2295
Genus: Mesorhizobium (72.73%)
11 10433 bp 67.44 8.07 94.43
SCN18_14_9_16_R1_B_scaffold_5134
Order: Rhizobiales (63.64%)
11 5443 bp 60.02 6.92 87.08
SCN18_14_9_16_R1_B_scaffold_3123
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
11 8264 bp 59.22 7.51 89.67
SCN18_14_9_16_R1_B_scaffold_1592
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
11 13828 bp 65.31 9.43 91.62
SCN18_14_9_16_R1_B_scaffold_2639
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
10 9415 bp 67.04 8.78 78.80
SCN18_14_9_16_R1_B_scaffold_5730
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
10 8716 bp 67.24 10.26 93.31
SCN18_14_9_16_R1_B_scaffold_5227
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
10 6417 bp 66.00 7.69 86.16
SCN18_14_9_16_R1_B_scaffold_2659
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
10 9368 bp 67.83 9.22 94.63
SCN18_14_9_16_R1_B_scaffold_4364
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (70%)
10 6277 bp 65.48 9.63 86.41
SCN18_14_9_16_R1_B_scaffold_2162
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
10 10937 bp 66.31 10.16 90.79
SCN18_14_9_16_R1_B_scaffold_3491
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (90%)
10 7532 bp 64.76 9.06 83.01
SCN18_14_9_16_R1_B_scaffold_9029
Order: Rhizobiales (50%)
10 3179 bp 59.48 6.79 73.67
SCN18_14_9_16_R1_B_scaffold_2693
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
10 9243 bp 66.08 10.00 88.51
SCN18_14_9_16_R1_B_scaffold_2960
Order: Rhizobiales (60%)
10 10759 bp 64.19 7.10 91.49
Displaying items 51-100 of 1208 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.