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13_2_20cm_UNK

In projects: 13_2_20CM_1  |  meta-analysis_of_species_overlap_in_grassland_soils_environments
Displaying items 651-700 of 212898 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_2_20cm_scaffold_1883
Phylum: Actinobacteria (66.67%)
15 14974 bp 70.82 7.83 92.62
13_2_20cm_scaffold_784
Domain: Bacteria (86.67%)
15 13047 bp 67.25 8.71 95.08
13_2_20cm_scaffold_7817
Domain: Archaea (86.67%)
15 7120 bp 52.28 23.06 91.26
13_2_20cm_scaffold_2858 15 12464 bp 52.66 6.50 72.54
13_2_20cm_scaffold_2071
Phylum: Rokubacteria (53.33%)
15 16935 bp 67.37 9.17 91.20
13_2_20cm_scaffold_2844
Phylum: Proteobacteria (60%)
15 12174 bp 62.07 21.36 79.28
13_2_20cm_scaffold_4799
Domain: Bacteria (73.33%)
15 9583 bp 59.21 5.81 88.28
13_2_20cm_scaffold_6594
Domain: Bacteria (73.33%)
15 10360 bp 72.13 5.91 89.39
13_2_20cm_scaffold_1550
Domain: Archaea (66.67%)
15 16614 bp 51.87 12.27 75.57
13_2_20cm_scaffold_9225
Class: Actinobacteria (86.67%)
15 13083 bp 71.73 5.66 82.14
13_2_20cm_scaffold_25119
Domain: Bacteria (53.33%)
15 8908 bp 57.60 15.22 67.56
13_2_20cm_scaffold_2731
Domain: Bacteria (73.33%)
15 10768 bp 73.51 5.71 92.05
13_2_20cm_scaffold_17855
Domain: Archaea (53.33%)
15 11337 bp 53.11 7.68 78.14
13_2_20cm_scaffold_3212
Domain: Bacteria (100%)
15 8191 bp 65.72 8.67 95.12
13_2_20cm_scaffold_4777
Domain: Bacteria (73.33%)
15 14842 bp 62.84 6.71 91.14
13_2_20cm_scaffold_11702 15 8129 bp 62.38 5.34 78.35
13_2_20cm_scaffold_5978
Class: Alphaproteobacteria (60%)
15 15546 bp 63.48 5.63 84.56
13_2_20cm_scaffold_1546
Class: Betaproteobacteria (53.33%)
15 18042 bp 63.55 7.16 89.74
13_2_20cm_scaffold_10297
Domain: Bacteria (80%)
15 11651 bp 65.17 11.65 88.27
13_2_20cm_scaffold_5907 15 12556 bp 26.05 12.13 31.68
13_2_20cm_scaffold_5792 15 10059 bp 58.02 7.54 65.14
13_2_20cm_scaffold_805 15 13500 bp 52.71 7.03 74.40
13_2_20cm_scaffold_1350 15 10984 bp 50.80 9.96 73.50
13_2_20cm_scaffold_13454 15 7489 bp 51.30 6.40 80.84
13_2_20cm_scaffold_24339
Order: Rhizobiales (66.67%)
15 11974 bp 65.49 6.85 87.92
13_2_20cm_scaffold_4500
Phylum: Actinobacteria (53.33%)
15 9916 bp 65.89 8.20 91.31
13_2_20cm_scaffold_1092
Domain: Bacteria (73.33%)
15 11545 bp 65.49 13.89 95.91
13_2_20cm_scaffold_4249
Domain: Bacteria (60%)
15 10594 bp 53.66 4.29 82.29
13_2_20cm_scaffold_865
Class: Alphaproteobacteria (80%)
15 11785 bp 65.33 9.29 89.94
13_2_20cm_scaffold_2714
Phylum: Rokubacteria (66.67%)
15 17513 bp 68.10 6.55 86.56
13_2_20cm_scaffold_5217
Domain: Bacteria (100%)
15 8833 bp 66.22 7.59 90.24
13_2_20cm_scaffold_665 15 23535 bp 50.28 9.61 61.87
13_2_20cm_scaffold_11059
Species: Conexibacter woesei (60%)
15 14304 bp 71.86 7.91 90.90
13_2_20cm_scaffold_5955
Domain: Bacteria (80%)
15 13129 bp 70.09 6.18 93.27
13_2_20cm_scaffold_8559
Phylum: Rokubacteria (66.67%)
15 12279 bp 67.84 6.28 87.08
13_2_20cm_scaffold_27148
Phylum: Rokubacteria (86.67%)
15 12248 bp 69.53 7.01 85.07
13_2_20cm_scaffold_4020
Phylum: Acidobacteria (66.67%)
15 12318 bp 54.37 7.97 76.60
13_2_20cm_scaffold_11682 15 6387 bp 53.73 9.16 77.92
13_2_20cm_scaffold_7822
Phylum: Euryarchaeota (93.33%)
15 11495 bp 64.90 20.37 87.17
13_2_20cm_scaffold_2690
Domain: Bacteria (73.33%)
15 14108 bp 68.51 12.45 98.65
13_2_20cm_scaffold_9230
Phylum: Gemmatimonadetes (80%)
15 9210 bp 68.20 7.77 92.96
13_2_20cm_scaffold_16959
Phylum: Gemmatimonadetes (93.33%)
15 9588 bp 65.30 7.85 94.12
13_2_20cm_scaffold_8030 15 7389 bp 57.67 5.03 85.18
13_2_20cm_scaffold_6116
Species: Conexibacter woesei (60%)
15 12710 bp 71.94 7.66 92.67
13_2_20cm_scaffold_1090 15 17084 bp 56.17 7.43 86.40
13_2_20cm_scaffold_3643
Domain: Bacteria (80%)
15 14033 bp 65.40 6.60 93.44
13_2_20cm_scaffold_14310
Phylum: Gemmatimonadetes (60%)
15 10667 bp 71.64 31.70 94.08
13_2_20cm_scaffold_18317
Domain: Bacteria (80%)
15 12499 bp 68.86 30.72 92.74
13_2_20cm_scaffold_19771
Phylum: Nitrospirae (80%)
15 10876 bp 62.64 10.06 83.08
13_2_20cm_scaffold_2492
Domain: Bacteria (60%)
15 13668 bp 66.58 5.69 85.29
Displaying items 651-700 of 212898 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.