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scnpilot_cont_500_p_scaffold_18

Search features with annotation key words

Displaying items 31-60 of 293 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_18_31
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


30532..30903
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RS12_NOVAD
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Nov
scnpilot_cont_500_p_scaffold_18_32
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


30953..31423
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J6K6_9SPHN
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
30S ribosomal protein S7
scnpilot_cont_500_p_scaffold_18_33
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31525..33597
DNA (2073bp) protein (691aa)
elongation factor G n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6A408 rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
fusA; elongation factor G
scnpilot_cont_500_p_scaffold_18_34
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33747..34937
DNA (1191bp) protein (397aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBC7_9SPHN rbh
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteri
scnpilot_cont_500_p_scaffold_18_35
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


35060..35371
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RS10_NOVAD
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
scnpilot_cont_500_p_scaffold_18_36
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


35647..36372
DNA (726bp) protein (242aa)
50S ribosomal protein L3 n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBC5_9SPHN rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Nov
rplC; 50S ribosomal protein L3
scnpilot_cont_500_p_scaffold_18_37
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


36376..37005
DNA (630bp) protein (210aa)
50S ribosomal protein L4 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B417BB rbh
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
scnpilot_cont_500_p_scaffold_18_38
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


36998..37303
DNA (306bp) protein (102aa)
50S ribosomal protein L23 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B32807
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
rplW; 50S ribosomal protein L23
scnpilot_cont_500_p_scaffold_18_39
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


37316..38152
DNA (837bp) protein (279aa)
50S ribosomal protein L2 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5A6B8 rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
rplB; 50S ribosomal protein L2
scnpilot_cont_500_p_scaffold_18_40
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


38159..38437
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Novosphingobium sp. AP12 RepID=J2PR83_9SPHN
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
30S ribosomal protein S19
scnpilot_cont_500_p_scaffold_18_41
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


38437..38814
DNA (378bp) protein (126aa)
50S ribosomal protein L22 n=1 Tax=Novosphingobium subterraneum RepID=I0IVW4_9SPHN
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Nov
rplV; 50S ribosomal protein L22
scnpilot_cont_500_p_scaffold_18_42
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


38818..39513
DNA (696bp) protein (232aa)
30S ribosomal protein S3 n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HMJ5_9SPHN rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
rpsC; 30S ribosomal protein S3
scnpilot_cont_500_p_scaffold_18_43
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


39531..39965
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBB8_9SPHN
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No
50S ribosomal protein L16
scnpilot_cont_500_p_scaffold_18_44
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


39965..40168
DNA (204bp) protein (68aa)
50S ribosomal protein L29 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8X2_NOVAD
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
scnpilot_cont_500_p_scaffold_18_45
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


40179..40448
DNA (270bp) protein (90aa)
30S ribosomal protein S17 n=1 Tax=Novosphingobium subterraneum RepID=I0IVW6_9SPHN
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
scnpilot_cont_500_p_scaffold_18_46
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


40588..40956
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002D57694
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N
50S ribosomal protein L14
scnpilot_cont_500_p_scaffold_18_47
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


40956..41276
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJ72_9SPHN
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
50S ribosomal protein L24
scnpilot_cont_500_p_scaffold_18_48
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


41269..41847
DNA (579bp) protein (193aa)
50S ribosomal protein L5 n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HWY6_9SPHN rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
rplE; 50S ribosomal protein L5
scnpilot_cont_500_p_scaffold_18_49
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


41880..42185
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=2 Tax=Novosphingobium RepID=F6IMD2_9SPHN
30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
scnpilot_cont_500_p_scaffold_18_50
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


42197..42592
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WKR5_9SPHN
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
30S ribosomal protein S8
scnpilot_cont_500_p_scaffold_18_51
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


42592..43125
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RL6_NOVAD rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novo
rplF; 50S ribosomal protein L6
scnpilot_cont_500_p_scaffold_18_52
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


43125..43475
DNA (351bp) protein (117aa)
50S ribosomal protein L18 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RL18_NOVAD
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
rplR; 50S ribosomal protein L18
scnpilot_cont_500_p_scaffold_18_53
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


43478..44194
DNA (717bp) protein (239aa)
30S ribosomal protein S5 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B38573 rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No
rpsE; 30S ribosomal protein S5
scnpilot_cont_500_p_scaffold_18_54
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


44200..44376
DNA (177bp) protein (59aa)
50S ribosomal protein L30 n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBA7_9SPHN
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No
rpmD; 50S ribosomal protein L30
scnpilot_cont_500_p_scaffold_18_55
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


44856..45335
DNA (480bp) protein (160aa)
50S ribosomal protein L15 n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBA6_9SPHN
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No
50S ribosomal protein L15
scnpilot_cont_500_p_scaffold_18_56
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


45454..46821
DNA (1368bp) protein (456aa)
Protein translocase subunit SecY n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8W0_NOVAD rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
secY; preprotein translocase subunit SecY
scnpilot_cont_500_p_scaffold_18_57
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46862..47506
DNA (645bp) protein (215aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E9B3_9SPHN rbh
adenylate kinase
scnpilot_cont_500_p_scaffold_18_58
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


47843..48211
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RS13_NOVAD
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
rpsM; 30S ribosomal protein S13
scnpilot_cont_500_p_scaffold_18_59
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


48263..48652
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIN8_9SPHN
30S ribosomal protein S11 {ECO:0000313|EMBL:AKH41169.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alter
30S ribosomal protein S11
scnpilot_cont_500_p_scaffold_18_60
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48768..49829
DNA (1062bp) protein (354aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RPOA_NOVAD rbh
Displaying items 31-60 of 293 in total

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