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PLM4_65_b1_sep16_Methylomirabilis_oxyfera_61_16

PLM4_65cm_b1_redo_sep2016_Bacteria_61_16
In projects: PLM4_65cm_b1_redo_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Bacteria

Displaying items 51-100 of 132 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_65_b1_redo_sep16_scaffold_835
Domain: Bacteria (85.19%)
27 33925 bp 61.67 14.81 89.39
PLM4_65_b1_redo_sep16_scaffold_2463
Species: Candidatus Methylomirabilis oxyfera (78.26%)
23 20175 bp 60.23 16.21 89.23
PLM4_65_b1_redo_sep16_scaffold_28152
Domain: Bacteria (71.43%)
7 5609 bp 59.98 18.00 89.16
PLM4_65_b1_redo_sep16_scaffold_46962
Species: Candidatus Methylomirabilis oxyfera (80%)
5 5109 bp 61.79 16.15 89.08
PLM4_65_b1_redo_sep16_scaffold_55394
Domain: Bacteria (60%)
5 3826 bp 60.95 15.17 89.07
PLM4_65_b1_redo_sep16_scaffold_2569
Phylum: NC10 (50%)
12 19756 bp 61.53 16.30 88.94
PLM4_65_b1_redo_sep16_scaffold_4585
Species: Candidatus Methylomirabilis oxyfera (72.22%)
18 14718 bp 60.73 16.05 88.63
PLM4_65_b1_redo_sep16_scaffold_122674
Domain: Bacteria (60%)
5 2903 bp 59.39 15.66 88.36
PLM4_65_b1_redo_sep16_scaffold_32473
Species: Candidatus Methylomirabilis oxyfera (83.33%)
6 5657 bp 60.16 18.75 88.09
PLM4_65_b1_redo_sep16_scaffold_19517
Species: Candidatus Methylomirabilis oxyfera (62.5%)
8 6868 bp 60.82 14.35 87.93
PLM4_65_b1_redo_sep16_scaffold_9375
Species: Candidatus Methylomirabilis oxyfera (63.64%)
11 10174 bp 61.74 17.66 87.72
PLM4_65_b1_redo_sep16_scaffold_2111
Domain: Bacteria (100%)
18 21822 bp 61.21 16.32 87.71
PLM4_65_b1_redo_sep16_scaffold_14502
Species: Candidatus Methylomirabilis oxyfera (50%)
8 8073 bp 61.12 16.09 87.63
PLM4_65_b1_redo_sep16_scaffold_1943
Species: Candidatus Methylomirabilis oxyfera (69.57%)
23 22687 bp 60.41 15.77 87.53
PLM4_65_b1_redo_sep16_scaffold_10108
Domain: Bacteria (100%)
14 12980 bp 63.67 13.97 87.48
PLM4_65_b1_redo_sep16_scaffold_3558
Domain: Bacteria (81.25%)
16 16776 bp 61.80 14.29 87.30
PLM4_65_b1_redo_sep16_scaffold_2493
Species: Candidatus Methylomirabilis oxyfera (60%)
25 29171 bp 60.94 15.68 87.18
PLM4_65_b1_redo_sep16_scaffold_922
Domain: Bacteria (80%)
50 52743 bp 60.36 15.84 87.15
PLM4_65_b1_redo_sep16_scaffold_3260
Domain: Bacteria (93.94%)
33 26361 bp 61.27 16.02 87.08
PLM4_65_b1_redo_sep16_scaffold_1012
Domain: Bacteria (93.75%)
32 38908 bp 58.80 15.34 87.06
PLM4_65_b1_redo_sep16_scaffold_7025
Domain: Bacteria (84.62%)
13 11790 bp 61.76 16.15 86.82
PLM4_65_b1_redo_sep16_scaffold_24756
Species: Candidatus Methylomirabilis oxyfera (66.67%)
6 6019 bp 60.99 18.07 86.73
PLM4_65_b1_redo_sep16_scaffold_18342
Species: Candidatus Methylomirabilis oxyfera (50%)
8 7102 bp 61.55 14.85 86.68
PLM4_65_b1_redo_sep16_scaffold_4431
Species: Candidatus Methylomirabilis oxyfera (69.23%)
13 16450 bp 61.11 16.61 86.63
PLM4_65_b1_redo_sep16_scaffold_56872
Domain: Bacteria (85.71%)
7 4153 bp 62.51 14.92 86.25
PLM4_65_b1_redo_sep16_scaffold_4808
Species: Candidatus Methylomirabilis oxyfera (70.59%)
17 14325 bp 61.55 15.64 85.97
PLM4_65_b1_redo_sep16_scaffold_909
Domain: Bacteria (88.24%)
34 32203 bp 61.53 15.86 85.93
PLM4_65_b1_redo_sep16_scaffold_3199
Species: Candidatus Methylomirabilis oxyfera (80%)
15 17698 bp 59.18 16.76 85.91
PLM4_65_b1_redo_sep16_scaffold_864
Species: Candidatus Methylomirabilis oxyfera (62.86%)
35 32935 bp 58.28 17.73 85.86
PLM4_65_b1_redo_sep16_scaffold_64000
Domain: Bacteria (66.67%)
3 3519 bp 58.85 13.51 85.85
PLM4_65_b1_redo_sep16_scaffold_756
Species: Candidatus Methylomirabilis oxyfera (51.43%)
35 34903 bp 61.62 16.68 85.79
PLM4_65_b1_redo_sep16_scaffold_96388
Species: Candidatus Methylomirabilis oxyfera (50%)
4 3638 bp 64.38 18.31 85.76
PLM4_65_b1_redo_sep16_scaffold_42522
Phylum: NC10 (50%)
4 4464 bp 60.95 19.25 85.69
PLM4_65_b1_redo_sep16_scaffold_29697
Domain: Bacteria (60%)
5 5452 bp 58.38 13.95 85.68
PLM4_65_b1_redo_sep16_scaffold_25897
Domain: Bacteria (100%)
5 6212 bp 60.42 14.95 85.24
PLM4_65_b1_redo_sep16_scaffold_824
Species: Candidatus Methylomirabilis oxyfera (52.5%)
40 33640 bp 61.14 15.85 85.14
PLM4_65_b1_redo_sep16_scaffold_40997
Domain: Bacteria (85.71%)
7 4557 bp 60.63 17.81 85.12
PLM4_65_b1_redo_sep16_scaffold_3810
Domain: Bacteria (72.22%)
18 17275 bp 58.98 16.67 84.96
PLM4_65_b1_redo_sep16_scaffold_6734
Domain: Bacteria (72.22%)
18 14956 bp 58.94 14.61 84.95
PLM4_65_b1_redo_sep16_scaffold_11369
Species: Candidatus Methylomirabilis oxyfera (61.54%)
13 10071 bp 59.58 15.92 84.78
PLM4_65_b1_redo_sep16_scaffold_101933
Domain: Bacteria (66.67%)
3 2674 bp 61.14 19.86 84.70
PLM4_65_b1_redo_sep16_scaffold_10778
Domain: Bacteria (83.33%)
12 9454 bp 60.33 16.83 84.66
PLM4_65_b1_redo_sep16_scaffold_83091 3 3020 bp 60.00 14.90 84.64
PLM4_65_b1_redo_sep16_scaffold_4019
Domain: Bacteria (93.75%)
16 15714 bp 61.31 16.69 84.44
PLM4_65_b1_redo_sep16_scaffold_3602
Domain: Bacteria (94.44%)
18 18554 bp 61.25 16.99 84.42
PLM4_65_b1_redo_sep16_scaffold_516
Species: Candidatus Methylomirabilis oxyfera (65.12%)
43 47298 bp 60.63 15.56 83.91
PLM4_65_b1_redo_sep16_scaffold_7544
Domain: Bacteria (92.31%)
13 11353 bp 59.03 16.05 83.71
PLM4_65_b1_redo_sep16_scaffold_15498
Species: Candidatus Methylomirabilis oxyfera (80%)
5 7783 bp 61.45 15.48 83.53
PLM4_65_b1_redo_sep16_scaffold_52904
Species: CSP1_5_NC10 (71.43%)
7 3934 bp 60.12 17.39 83.43
PLM4_65_b1_redo_sep16_scaffold_2308
Domain: Bacteria (76.47%)
34 26606 bp 59.60 14.25 83.40
Displaying items 51-100 of 132 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.