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PLM3_30_b2_sep16_Verrucomicrobia_Verrucomicrobiales_62_7

PLM3_30cm_b2_sep2016_Bacteria_62_7
In projects: PLM3_30cm_b2_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Bacteria

Displaying items 1-50 of 650 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3_30_b2_sep16_scaffold_142
Domain: Bacteria (92%)
50 64375 bp 60.22 8.84 88.39
PLM3_30_b2_sep16_scaffold_908
Domain: Bacteria (73.58%)
53 55733 bp 62.03 6.78 84.67
PLM3_30_b2_sep16_scaffold_27
Domain: Bacteria (81.82%)
33 47978 bp 63.24 6.83 88.83
PLM3_30_b2_sep16_scaffold_748
Phylum: Verrucomicrobia (57.5%)
40 45277 bp 62.90 6.87 89.86
PLM3_30_b2_sep16_scaffold_313
Species: Pedosphaera parvula (57.14%)
21 42694 bp 61.50 7.00 96.01
PLM3_30_b2_sep16_scaffold_235
Domain: Bacteria (70%)
40 41496 bp 61.75 7.32 81.17
PLM3_30_b2_sep16_scaffold_493
Domain: Bacteria (86.21%)
29 40845 bp 61.65 6.92 86.50
PLM3_30_b2_sep16_scaffold_502
Domain: Bacteria (87.5%)
24 40753 bp 61.56 7.10 93.68
PLM3_30_b2_sep16_scaffold_1919
Phylum: Verrucomicrobia (58.82%)
34 38451 bp 61.77 7.37 90.06
PLM3_30_b2_sep16_scaffold_55
Domain: Bacteria (80%)
25 37283 bp 60.52 7.57 88.88
PLM3_30_b2_sep16_scaffold_219
Domain: Bacteria (72.41%)
29 36546 bp 61.77 7.40 90.19
PLM3_30_b2_sep16_scaffold_131
Domain: Bacteria (65.52%)
29 36537 bp 59.85 9.68 83.10
PLM3_30_b2_sep16_scaffold_549
Species: Pedosphaera parvula (76.67%)
30 35356 bp 61.17 7.25 90.52
PLM3_30_b2_sep16_scaffold_1272
Phylum: Verrucomicrobia (53.33%)
30 32293 bp 61.58 7.54 82.78
PLM3_30_b2_sep16_scaffold_30
Domain: Bacteria (80%)
40 31361 bp 60.12 8.15 87.06
PLM3_30_b2_sep16_scaffold_387
Phylum: Verrucomicrobia (54.55%)
22 30779 bp 61.64 7.05 89.01
PLM3_30_b2_sep16_scaffold_918
Domain: Bacteria (89.47%)
19 30557 bp 61.21 7.33 89.95
PLM3_30_b2_sep16_scaffold_882
Species: Pedosphaera parvula (50%)
24 30071 bp 63.06 7.03 78.08
PLM3_30_b2_sep16_scaffold_1214
Domain: Bacteria (86.96%)
23 29790 bp 62.09 7.26 86.57
PLM3_30_b2_sep16_scaffold_236
Domain: Bacteria (83.33%)
24 29611 bp 60.06 8.71 91.93
PLM3_30_b2_sep16_scaffold_220
Domain: Bacteria (85%)
20 29485 bp 60.43 8.59 91.71
PLM3_30_b2_sep16_scaffold_371
Domain: Bacteria (95.65%)
23 29238 bp 60.86 6.63 80.81
PLM3_30_b2_sep16_scaffold_2039
Domain: Bacteria (90%)
20 27856 bp 61.93 6.91 86.48
PLM3_30_b2_sep16_scaffold_77
Domain: Bacteria (84.62%)
26 27767 bp 60.53 8.24 85.07
PLM3_30_b2_sep16_scaffold_91
Species: Pedosphaera parvula (64.29%)
14 27687 bp 61.86 7.08 82.72
PLM3_30_b2_sep16_scaffold_2321
Species: Pedosphaera parvula (70.37%)
27 27128 bp 62.40 6.87 89.61
PLM3_30_b2_sep16_scaffold_538
Class: Verrucomicrobiae (50%)
20 26928 bp 62.70 6.16 88.19
PLM3_30_b2_sep16_scaffold_600
Domain: Bacteria (81.25%)
16 26799 bp 62.57 6.83 88.57
PLM3_30_b2_sep16_scaffold_2073
Species: Pedosphaera parvula (76.19%)
21 26586 bp 63.74 5.91 85.44
PLM3_30_b2_sep16_scaffold_246
Domain: Bacteria (80.95%)
21 26401 bp 59.69 8.40 91.46
PLM3_30_b2_sep16_scaffold_1783
Species: Pedosphaera parvula (56.52%)
23 26205 bp 62.82 6.79 86.67
PLM3_30_b2_sep16_scaffold_1455
Species: Pedosphaera parvula (68%)
25 26119 bp 62.41 7.40 87.59
PLM3_30_b2_sep16_scaffold_1948
Class: Verrucomicrobiae (52.63%)
19 25882 bp 62.29 6.85 85.22
PLM3_30_b2_sep16_scaffold_520
Phylum: Verrucomicrobia (56.25%)
16 25349 bp 62.24 6.52 91.91
PLM3_30_b2_sep16_scaffold_1656
Domain: Bacteria (89.47%)
19 25349 bp 62.43 7.27 83.40
PLM3_30_b2_sep16_scaffold_381
Phylum: Verrucomicrobia (50%)
20 25303 bp 63.90 6.52 92.35
PLM3_30_b2_sep16_scaffold_151
Domain: Bacteria (90.48%)
21 25216 bp 61.07 7.26 80.17
PLM3_30_b2_sep16_scaffold_811
Domain: Bacteria (90.91%)
11 25039 bp 61.59 7.13 87.86
PLM3_30_b2_sep16_scaffold_341
Phylum: Verrucomicrobia (57.89%)
19 24119 bp 60.98 7.00 83.73
PLM3_30_b2_sep16_scaffold_1356
Domain: Bacteria (71.43%)
21 23782 bp 62.19 7.13 87.55
PLM3_30_b2_sep16_scaffold_213
Class: Verrucomicrobiae (50%)
22 23565 bp 61.64 7.45 88.17
PLM3_30_b2_sep16_scaffold_1267
Species: Pedosphaera parvula (52.38%)
21 23493 bp 61.43 6.61 86.95
PLM3_30_b2_sep16_scaffold_737
Domain: Bacteria (82.35%)
17 23394 bp 60.23 9.67 78.83
PLM3_30_b2_sep16_scaffold_841
Species: Pedosphaera parvula (56.25%)
16 23062 bp 61.80 7.77 84.62
PLM3_30_b2_sep16_scaffold_264
Species: Pedosphaera parvula (58.82%)
17 22922 bp 61.80 7.62 84.01
PLM3_30_b2_sep16_scaffold_754
Phylum: Verrucomicrobia (55.56%)
18 22549 bp 62.24 6.88 88.43
PLM3_30_b2_sep16_scaffold_680
Species: Pedosphaera parvula (61.11%)
18 22447 bp 63.54 6.86 90.25
PLM3_30_b2_sep16_scaffold_986
Domain: Bacteria (65%)
20 22128 bp 63.19 6.71 82.42
PLM3_30_b2_sep16_scaffold_547
Species: Pedosphaera parvula (52.94%)
17 22005 bp 62.25 7.06 87.14
PLM3_30_b2_sep16_scaffold_564
Domain: Bacteria (90%)
10 21834 bp 61.53 7.30 93.20
Displaying items 1-50 of 650 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.