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SCNPILOT_CONT_500_BF_Rhizobiales_63_8

In projects: SCNPILOT_CONT_500_BF

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

from TS-ESOM, split bin

Displaying items 101-150 of 424 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_6450
Order: Rhizobiales (85%)
20 14371 bp 63.65 6.49 86.40
SCNpilot_cont_500_bf_scaffold_3182
Genus: Mesorhizobium (55%)
20 12909 bp 61.81 9.93 90.45
SCNpilot_cont_500_bf_scaffold_2415
Species: Azospirillum thiophilum (50%)
20 20304 bp 62.04 9.41 87.28
SCNpilot_cont_500_bf_scaffold_1647
Order: Rhizobiales (55%)
20 19047 bp 63.93 8.11 92.45
SCNpilot_cont_500_bf_scaffold_5943
Genus: Mesorhizobium (50%)
20 16488 bp 61.93 8.60 83.84
SCNpilot_cont_500_bf_scaffold_4697
Order: Rhizobiales (85%)
20 17032 bp 63.62 10.35 91.54
SCNpilot_cont_500_bf_scaffold_1763
Phylum: Proteobacteria (84.21%)
19 23111 bp 61.41 8.66 92.70
SCNpilot_cont_500_bf_scaffold_1273
Class: Alphaproteobacteria (78.95%)
19 23292 bp 60.94 8.09 92.53
SCNpilot_cont_500_bf_scaffold_2165
Genus: Mesorhizobium (73.68%)
19 15042 bp 62.73 8.09 88.51
SCNpilot_cont_500_bf_scaffold_3741
Order: Rhizobiales (68.42%)
19 18297 bp 62.14 8.59 89.60
SCNpilot_cont_500_bf_scaffold_1937
Order: Rhizobiales (57.89%)
19 20333 bp 59.78 8.67 88.60
SCNpilot_cont_500_bf_scaffold_3068
Order: Rhizobiales (84.21%)
19 18479 bp 62.75 8.06 91.01
SCNpilot_cont_500_bf_scaffold_1808
Order: Rhizobiales (88.89%)
18 17602 bp 62.16 8.05 89.04
SCNpilot_cont_500_bf_scaffold_5548
Species: Mesorhizobium alhagi (55.56%)
18 16436 bp 63.71 9.11 95.11
SCNpilot_cont_500_bf_scaffold_1603
Genus: Mesorhizobium (61.11%)
18 19481 bp 61.22 7.97 92.18
SCNpilot_cont_500_bf_scaffold_2178
Genus: Mesorhizobium (66.67%)
18 19521 bp 64.18 10.31 92.61
SCNpilot_cont_500_bf_scaffold_2755
Order: Rhizobiales (83.33%)
18 18515 bp 65.28 7.49 82.39
SCNpilot_cont_500_bf_scaffold_3293
Order: Rhizobiales (77.78%)
18 17331 bp 63.78 5.48 82.95
SCNpilot_cont_500_bf_scaffold_3346
Class: Alphaproteobacteria (50%)
18 15454 bp 61.37 7.94 81.26
SCNpilot_cont_500_bf_scaffold_5029
Genus: Mesorhizobium (58.82%)
17 13536 bp 63.04 7.74 90.43
SCNpilot_cont_500_bf_scaffold_1868
Order: Rhizobiales (88.24%)
17 17063 bp 63.19 9.66 86.57
SCNpilot_cont_500_bf_scaffold_4582
Order: Rhizobiales (76.47%)
17 18003 bp 62.77 10.00 93.23
SCNpilot_cont_500_bf_scaffold_2249
Genus: Mesorhizobium (64.71%)
17 21180 bp 62.40 8.73 93.10
SCNpilot_cont_500_bf_scaffold_8334
Order: Rhizobiales (94.12%)
17 10217 bp 63.03 6.61 91.55
SCNpilot_cont_500_bf_scaffold_2316
Genus: Mesorhizobium (68.75%)
16 16638 bp 64.94 8.75 92.00
SCNpilot_cont_500_bf_scaffold_2594
Order: Rhizobiales (68.75%)
16 15827 bp 61.82 10.77 84.69
SCNpilot_cont_500_bf_scaffold_2891
Order: Rhizobiales (56.25%)
16 11986 bp 63.11 9.07 90.81
SCNpilot_cont_500_bf_scaffold_10120
Order: Rhizobiales (50%)
16 8466 bp 60.47 7.35 79.28
SCNpilot_cont_500_bf_scaffold_7415
Order: Rhizobiales (81.25%)
16 14855 bp 63.83 8.67 92.84
SCNpilot_cont_500_bf_scaffold_5369
Species: Mesorhizobium sp. L48C026A00 (56.25%)
16 13614 bp 65.19 10.10 93.01
SCNpilot_cont_500_bf_scaffold_1943
Genus: Mesorhizobium (75%)
16 16581 bp 62.73 8.79 86.09
SCNpilot_cont_500_bf_scaffold_2076
Species: bacterium YEK0313 (60%)
15 16166 bp 62.13 9.26 84.46
SCNpilot_cont_500_bf_scaffold_5754
Order: Rhizobiales (93.33%)
15 16971 bp 63.15 5.54 86.23
SCNpilot_cont_500_bf_scaffold_13029
Order: Rhizobiales (93.33%)
15 12513 bp 63.14 6.37 80.68
SCNpilot_cont_500_bf_scaffold_3450
Genus: Mesorhizobium (60%)
15 17959 bp 61.99 9.55 88.32
SCNpilot_cont_500_bf_scaffold_6234
Genus: Mesorhizobium (66.67%)
15 12264 bp 62.71 8.62 85.69
SCNpilot_cont_500_bf_scaffold_7911
Genus: Mesorhizobium (53.33%)
15 14649 bp 64.22 9.49 87.59
SCNpilot_cont_500_bf_scaffold_9417
Order: Rhizobiales (53.33%)
15 13762 bp 62.14 5.34 86.19
SCNpilot_cont_500_bf_scaffold_2987
Phylum: Proteobacteria (86.67%)
15 19073 bp 60.98 9.11 84.64
SCNpilot_cont_500_bf_scaffold_3272
Order: Rhizobiales (66.67%)
15 14970 bp 62.95 5.98 87.84
SCNpilot_cont_500_bf_scaffold_3320
Genus: Mesorhizobium (80%)
15 16824 bp 64.65 7.64 85.64
SCNpilot_cont_500_bf_scaffold_2299
Phylum: Proteobacteria (66.67%)
15 14446 bp 55.62 8.48 83.21
SCNpilot_cont_500_bf_scaffold_2124
Species: Hoeflea sp. BRH_c9 (78.57%)
14 15297 bp 62.69 7.99 94.41
SCNpilot_cont_500_bf_scaffold_10127
Genus: Bradyrhizobium (50%)
14 11713 bp 65.52 7.02 90.64
SCNpilot_cont_500_bf_scaffold_4826
Genus: Mesorhizobium (71.43%)
14 15618 bp 63.88 8.82 90.07
SCNpilot_cont_500_bf_scaffold_7183
Order: Rhizobiales (85.71%)
14 10511 bp 60.48 7.30 85.17
SCNpilot_cont_500_bf_scaffold_12635
Genus: Mesorhizobium (53.85%)
13 7465 bp 63.16 6.56 91.43
SCNpilot_cont_500_bf_scaffold_6671
Order: Rhizobiales (100%)
13 9957 bp 64.39 6.50 87.56
SCNpilot_cont_500_bf_scaffold_4497
Species: Xanthobacter autotrophicus (84.62%)
13 8336 bp 63.39 6.69 93.03
SCNpilot_cont_500_bf_scaffold_5533
Order: Rhizobiales (61.54%)
13 8263 bp 62.83 7.68 79.41
Displaying items 101-150 of 424 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.