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solids_Sphingobacteriales_2

SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_1
In projects: scnpilot_solids_dereplicated  |  SCNPILOT_SOLID2_TRIM150

Consensus taxonomy: Sphingobacteriales  →  Sphingobacteriia  →  Bacteroidetes  →  Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID2_TRIM150_UNK Manually curated genome

Properties

Avg. coverage: 1.00 Longest contig: 71.41 Kbp Bin length: 3.56 Mbp GC content: 40.11 %
Contigs count: 254 Features count: 3246 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Displaying items 101-150 of 254 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_solids2_trim150_scaffold_566_curated
Order: Sphingobacteriales (56%)
25 33288 bp 40.80 1.00 90.19
scnpilot_solids2_trim150_scaffold_1337_curated
Phylum: Bacteroidetes (89.66%)
29 31320 bp 36.99 1.00 90.08
scnpilot_solids2_trim150_scaffold_1326_curated
Phylum: Bacteroidetes (88.89%)
27 33820 bp 39.78 1.00 90.00
scnpilot_solids2_trim150_scaffold_10568_curated
Order: Sphingobacteriales (60%)
5 7035 bp 42.17 1.00 89.98
scnpilot_solids2_trim150_scaffold_2707_curated
Phylum: Bacteroidetes (77.27%)
22 21319 bp 40.24 1.00 89.98
scnpilot_solids2_trim150_scaffold_4157_curated
Phylum: Bacteroidetes (50%)
4 5547 bp 42.49 1.00 89.94
scnpilot_solids2_trim150_scaffold_1638_curated
Genus: Flavihumibacter (53.33%)
15 17414 bp 40.56 1.00 89.93
scnpilot_solids2_trim150_scaffold_4258_curated
Phylum: Bacteroidetes (57.14%)
7 9456 bp 41.02 1.00 89.91
scnpilot_solids2_trim150_scaffold_1220_curated
Order: Sphingobacteriales (52%)
25 30314 bp 38.91 1.00 89.90
scnpilot_solids2_trim150_scaffold_1506_curated
Order: Sphingobacteriales (83.87%)
31 38492 bp 39.75 1.00 89.84
scnpilot_solids2_trim150_scaffold_4055_curated
Species: Niastella koreensis (50%)
6 5705 bp 40.37 1.00 89.82
scnpilot_solids2_trim150_scaffold_907_curated
Phylum: Bacteroidetes (85.71%)
35 39990 bp 41.08 1.00 89.81
scnpilot_solids2_trim150_scaffold_1393_curated
Order: Sphingobacteriales (75%)
20 18832 bp 40.48 1.00 89.80
scnpilot_solids2_trim150_scaffold_19629_curated
Species: Flavihumibacter petaseus (50%)
2 1360 bp 39.71 1.00 89.78
scnpilot_solids2_trim150_scaffold_1436_curated
Order: Sphingobacteriales (68.52%)
54 53858 bp 41.55 1.00 89.77
scnpilot_solids2_trim150_scaffold_3679_curated
Order: Sphingobacteriales (77.78%)
9 8607 bp 39.50 1.00 89.72
scnpilot_solids2_trim150_scaffold_1586_curated
Order: Sphingobacteriales (70.59%)
17 22662 bp 39.01 1.00 89.62
scnpilot_solids2_trim150_scaffold_5941_curated
Species: Niastella koreensis (60%)
5 4027 bp 41.97 1.00 89.62
scnpilot_solids2_trim150_scaffold_382_curated
Order: Sphingobacteriales (59.09%)
66 71409 bp 39.87 1.00 89.51
scnpilot_solids2_trim150_scaffold_3316_curated
Order: Sphingobacteriales (60%)
5 7720 bp 37.16 1.00 89.46
scnpilot_solids2_trim150_scaffold_1323_curated
Phylum: Bacteroidetes (68.18%)
22 28940 bp 41.01 1.00 89.44
scnpilot_solids2_trim150_scaffold_6259_curated
Species: Niastella koreensis (50%)
8 6908 bp 39.94 1.00 89.42
scnpilot_solids2_trim150_scaffold_1649_curated
Order: Sphingobacteriales (84.62%)
13 15780 bp 39.49 1.00 89.39
scnpilot_solids2_trim150_scaffold_6392_curated
Phylum: Bacteroidetes (60%)
5 6306 bp 41.91 1.00 89.39
scnpilot_solids2_trim150_scaffold_3403_curated
Phylum: Bacteroidetes (90%)
10 14126 bp 40.10 1.00 89.28
scnpilot_solids2_trim150_scaffold_2481_curated
Phylum: Bacteroidetes (73.33%)
15 21821 bp 40.06 1.00 89.28
scnpilot_solids2_trim150_scaffold_1837_curated
Order: Sphingobacteriales (54.17%)
48 51793 bp 39.98 1.00 89.28
scnpilot_solids2_trim150_scaffold_7390_curated
Phylum: Bacteroidetes (85.71%)
7 5684 bp 39.81 1.00 89.20
scnpilot_solids2_trim150_scaffold_2828_curated
Order: Sphingobacteriales (85.71%)
14 18708 bp 41.49 1.00 89.18
scnpilot_solids2_trim150_scaffold_2887_curated
Phylum: Bacteroidetes (72.73%)
11 10110 bp 41.94 1.00 89.08
scnpilot_solids2_trim150_scaffold_2300_curated
Species: Niastella koreensis (54.55%)
11 10465 bp 40.99 1.00 88.84
scnpilot_solids2_trim150_scaffold_673_curated
Order: Sphingobacteriales (66.04%)
53 50262 bp 39.34 1.00 88.83
scnpilot_solids2_trim150_scaffold_773_curated
Order: Sphingobacteriales (65.31%)
49 55158 bp 39.72 1.00 88.78
scnpilot_solids2_trim150_scaffold_1580_curated
Phylum: Bacteroidetes (88.89%)
9 15479 bp 37.94 1.00 88.73
scnpilot_solids2_trim150_scaffold_4590_curated
Domain: Bacteria (100%)
5 6470 bp 34.08 1.00 88.66
scnpilot_solids2_trim150_scaffold_8808_curated
Order: Sphingobacteriales (66.67%)
6 4432 bp 39.03 1.00 88.61
scnpilot_solids2_trim150_scaffold_611_curated
Order: Sphingobacteriales (69.7%)
33 32245 bp 39.78 1.00 88.59
scnpilot_solids2_trim150_scaffold_756_curated
Order: Sphingobacteriales (70.73%)
41 53444 bp 39.78 1.00 88.59
scnpilot_solids2_trim150_scaffold_16126_curated
Species: Niabella soli (50%)
2 1579 bp 41.04 1.00 88.54
scnpilot_solids2_trim150_scaffold_1997_curated
Phylum: Bacteroidetes (80.77%)
26 25831 bp 39.14 1.00 88.52
scnpilot_solids2_trim150_scaffold_1695_curated
Order: Sphingobacteriales (63.64%)
11 13686 bp 41.01 1.00 88.51
scnpilot_solids2_trim150_scaffold_4226_curated
Species: Niastella koreensis (50%)
6 5455 bp 36.61 1.00 88.49
scnpilot_solids2_trim150_scaffold_3838_curated
Phylum: Bacteroidetes (57.14%)
7 8394 bp 40.54 1.00 88.46
scnpilot_solids2_trim150_scaffold_3812_curated
Order: Sphingobacteriales (50%)
12 14314 bp 40.21 1.00 88.38
scnpilot_solids2_trim150_scaffold_12406_curated
Species: Flavihumibacter solisilvae (66.67%)
3 1928 bp 38.85 1.00 88.38
scnpilot_solids2_trim150_scaffold_3115_curated
Genus: Flavihumibacter (50%)
12 11074 bp 40.71 1.00 88.37
scnpilot_solids2_trim150_scaffold_1062_curated
Phylum: Bacteroidetes (65%)
20 22066 bp 40.63 1.00 88.36
scnpilot_solids2_trim150_scaffold_1000_curated
Order: Sphingobacteriales (70%)
20 21845 bp 40.32 1.00 88.33
scnpilot_solids2_trim150_scaffold_943_curated
Phylum: Bacteroidetes (84%)
25 29410 bp 41.91 1.00 88.21
scnpilot_solids2_trim150_scaffold_3486_curated
Order: Sphingobacteriales (80%)
20 16852 bp 39.13 1.00 88.07
Displaying items 101-150 of 254 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.