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SCNPILOT_EXPT_1000_BF_Niastella_43_130

SCNPILOT_CONT_500_BF_Sphingobacteriales_44_5
In projects: SCNPILOT_CONT_500_BF

Consensus taxonomy: Sphingobacteriales  →  Sphingobacteriia  →  Bacteroidetes  →  Bacteria

Displaying items 1-50 of 1379 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_10784
Phylum: Bacteroidetes (75%)
12 15308 bp 43.89 4.88 89.42
SCNpilot_cont_500_bf_scaffold_4822
Phylum: Bacteroidetes (81.82%)
11 14685 bp 41.89 4.65 82.37
SCNpilot_cont_500_bf_scaffold_4515
Phylum: Bacteroidetes (71.43%)
14 14662 bp 42.18 4.89 86.16
SCNpilot_cont_500_bf_scaffold_7813
Order: Sphingobacteriales (68.42%)
19 13211 bp 40.31 5.37 86.95
SCNpilot_cont_500_bf_scaffold_8977
Order: Sphingobacteriales (58.33%)
12 12611 bp 45.30 5.11 94.54
SCNpilot_cont_500_bf_scaffold_3779
Phylum: Bacteroidetes (70%)
10 12333 bp 40.36 5.86 92.46
SCNpilot_cont_500_bf_scaffold_6854
Phylum: Bacteroidetes (66.67%)
12 11989 bp 42.75 5.03 85.90
SCNpilot_cont_500_bf_scaffold_3056
Phylum: Bacteroidetes (92.86%)
14 11517 bp 44.66 5.23 96.93
SCNpilot_cont_500_bf_scaffold_5562
Species: Niastella koreensis (53.33%)
15 11351 bp 43.28 4.71 87.24
SCNpilot_cont_500_bf_scaffold_3155
Phylum: Bacteroidetes (62.5%)
8 11207 bp 44.38 5.35 86.22
SCNpilot_cont_500_bf_scaffold_4993
Class: Bacteroidia (50%)
8 11153 bp 44.60 4.42 87.26
SCNpilot_cont_500_bf_scaffold_6413
Species: Niastella koreensis (61.54%)
13 11107 bp 44.70 4.19 91.02
SCNpilot_cont_500_bf_scaffold_9157
Domain: Bacteria (100%)
11 11064 bp 35.94 5.47 92.87
SCNpilot_cont_500_bf_scaffold_4488
Species: Flavihumibacter sp. ZG627 (50%)
8 10916 bp 36.54 4.97 93.44
SCNpilot_cont_500_bf_scaffold_8449
Order: Sphingobacteriales (61.54%)
13 10885 bp 43.45 4.36 86.02
SCNpilot_cont_500_bf_scaffold_3619
Phylum: Bacteroidetes (76.92%)
13 10845 bp 45.69 4.63 89.05
SCNpilot_cont_500_bf_scaffold_17364
Domain: Bacteria (90%)
10 10662 bp 43.91 5.82 79.94
SCNpilot_cont_500_bf_scaffold_12395
Order: Sphingobacteriales (50%)
14 10591 bp 43.25 4.79 91.67
SCNpilot_cont_500_bf_scaffold_4321
Phylum: Bacteroidetes (80%)
5 10586 bp 46.10 5.55 94.85
SCNpilot_cont_500_bf_scaffold_7414
Phylum: Bacteroidetes (75%)
8 10557 bp 41.53 4.97 93.55
SCNpilot_cont_500_bf_scaffold_13322
Order: Sphingobacteriales (50%)
8 10483 bp 44.20 5.01 85.97
SCNpilot_cont_500_bf_scaffold_7328
Order: Sphingobacteriales (83.33%)
12 10409 bp 43.61 4.47 89.78
SCNpilot_cont_500_bf_scaffold_11074
Order: Sphingobacteriales (88.89%)
9 10386 bp 41.62 5.20 86.60
SCNpilot_cont_500_bf_scaffold_5877
Order: Sphingobacteriales (71.43%)
7 10161 bp 45.05 4.82 95.90
SCNpilot_cont_500_bf_scaffold_3580
Species: Niastella koreensis (66.67%)
6 10040 bp 42.07 5.65 92.99
SCNpilot_cont_500_bf_scaffold_4242
Order: Sphingobacteriales (53.85%)
13 9964 bp 41.19 4.62 69.73
SCNpilot_cont_500_bf_scaffold_4775
Order: Sphingobacteriales (75%)
12 9957 bp 44.77 4.82 90.57
SCNpilot_cont_500_bf_scaffold_8601
Order: Sphingobacteriales (53.85%)
13 9953 bp 40.21 5.12 85.36
SCNpilot_cont_500_bf_scaffold_8499
Phylum: Bacteroidetes (60%)
10 9631 bp 44.23 4.41 84.73
SCNpilot_cont_500_bf_scaffold_5279
Order: Sphingobacteriales (60%)
10 9587 bp 44.45 5.19 86.09
SCNpilot_cont_500_bf_scaffold_6946
Order: Sphingobacteriales (75%)
12 9484 bp 43.91 4.43 73.51
SCNpilot_cont_500_bf_scaffold_10690
Phylum: Bacteroidetes (77.78%)
9 9337 bp 37.66 5.14 86.14
SCNpilot_cont_500_bf_scaffold_9330
Phylum: Bacteroidetes (80%)
5 9329 bp 39.50 5.28 34.70
SCNpilot_cont_500_bf_scaffold_8005
Order: Sphingobacteriales (83.33%)
6 9294 bp 42.08 4.79 85.73
SCNpilot_cont_500_bf_scaffold_6045
Phylum: Bacteroidetes (75%)
8 9273 bp 45.01 4.45 73.15
SCNpilot_cont_500_bf_scaffold_5327
Species: Niastella koreensis (75%)
8 9244 bp 44.76 4.90 85.22
SCNpilot_cont_500_bf_scaffold_10680
Order: Sphingobacteriales (100%)
7 9093 bp 45.63 4.34 88.52
SCNpilot_cont_500_bf_scaffold_4088
Class: Bacteroidia (66.67%)
6 8964 bp 42.94 5.47 94.18
SCNpilot_cont_500_bf_scaffold_10741
Order: Sphingobacteriales (50%)
8 8922 bp 39.46 4.99 86.21
SCNpilot_cont_500_bf_scaffold_4169
Species: Niastella koreensis (50%)
8 8835 bp 40.52 5.21 85.57
SCNpilot_cont_500_bf_scaffold_10594
Order: Sphingobacteriales (50%)
6 8770 bp 46.18 3.76 93.90
SCNpilot_cont_500_bf_scaffold_4214
Order: Sphingobacteriales (61.54%)
13 8765 bp 44.02 5.11 88.68
SCNpilot_cont_500_bf_scaffold_4216
Order: Bacteroidales (60%)
5 8763 bp 41.05 5.28 91.48
SCNpilot_cont_500_bf_scaffold_8002
Species: BJP_08E140C01_Flavobacteriales_35_8 (60%)
5 8740 bp 45.24 4.78 92.09
SCNpilot_cont_500_bf_scaffold_14185
Order: Cytophagales (55.56%)
9 8732 bp 43.77 5.30 91.42
SCNpilot_cont_500_bf_scaffold_6235
Phylum: Bacteroidetes (77.78%)
9 8659 bp 40.99 5.34 81.73
SCNpilot_cont_500_bf_scaffold_4315
Phylum: Bacteroidetes (85.71%)
7 8612 bp 37.73 5.31 89.25
SCNpilot_cont_500_bf_scaffold_9768
Domain: Bacteria (60%)
10 8610 bp 43.59 5.28 92.58
SCNpilot_cont_500_bf_scaffold_8640
Order: Sphingobacteriales (63.64%)
11 8543 bp 45.24 4.83 83.79
SCNpilot_cont_500_bf_scaffold_8244
Phylum: Bacteroidetes (83.33%)
6 8529 bp 44.76 5.13 94.13
Displaying items 1-50 of 1379 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.