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SW_12_Halobacteriales_65_16

In projects: SW_12  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Displaying items 51-100 of 226 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_12_scaffold_3578
Class: Halobacteria (71.43%)
7 3360 bp 67.11 16.40 76.34
sw_12_scaffold_1227
Genus: Halococcus (60%)
5 5954 bp 66.86 16.38 89.03
sw_12_scaffold_942
Order: Halobacteriales (50%)
8 8068 bp 65.43 16.37 78.01
sw_12_scaffold_353
Genus: Halococcus (51.72%)
29 24464 bp 65.63 16.37 85.51
sw_12_scaffold_916
Genus: Halococcus (66.67%)
6 7011 bp 63.36 16.35 85.05
sw_12_scaffold_2598
Order: Halobacteriales (71.43%)
7 6103 bp 65.82 16.35 90.10
sw_12_scaffold_600
Class: Halobacteria (90%)
10 10064 bp 66.77 16.32 90.62
sw_12_scaffold_782
Order: Halobacteriales (60%)
15 13419 bp 65.77 16.31 87.61
sw_12_scaffold_1190
Order: Halobacteriales (61.11%)
18 14782 bp 65.34 16.30 88.81
sw_12_scaffold_345
Class: Halobacteria (66.67%)
15 12280 bp 64.51 16.29 85.08
sw_12_scaffold_2531
Species: Halococcus salifodinae (50%)
4 6027 bp 65.74 16.28 82.88
sw_12_scaffold_268
Order: Halobacteriales (53.57%)
28 26250 bp 66.10 16.26 87.91
sw_12_scaffold_2833
Class: Halobacteria (57.14%)
7 3851 bp 65.18 16.23 85.61
sw_12_scaffold_3958
Order: Halobacteriales (62.5%)
8 4387 bp 65.81 16.23 78.37
sw_12_scaffold_155
Class: Halobacteria (80.77%)
26 23665 bp 65.35 16.21 83.37
sw_12_scaffold_196
Order: Halobacteriales (50%)
30 25062 bp 66.11 16.20 80.51
sw_12_scaffold_1398
Genus: Halococcus (50%)
16 12071 bp 65.45 16.20 85.69
sw_12_scaffold_3445
Genus: Halococcus (80%)
5 5045 bp 65.77 16.19 91.16
sw_12_scaffold_1371
Order: Halobacteriales (55%)
40 35325 bp 65.88 16.18 81.70
sw_12_scaffold_138
Order: Halobacteriales (56.52%)
46 45430 bp 65.51 16.17 86.24
sw_12_scaffold_1847
Genus: Haloarcula (50%)
6 6808 bp 63.65 16.16 94.39
sw_12_scaffold_3595
Genus: Halococcus (71.43%)
7 6007 bp 64.46 16.16 90.59
sw_12_scaffold_3431
Genus: Halococcus (50%)
4 3455 bp 66.45 16.15 88.57
sw_12_scaffold_986
Order: Halobacteriales (52.63%)
19 15032 bp 64.10 16.13 92.80
sw_12_scaffold_845
Genus: Halococcus (50%)
8 7299 bp 66.02 16.10 75.09
sw_12_scaffold_2262
Genus: Halococcus (50%)
10 7816 bp 64.50 16.07 90.05
sw_12_scaffold_518
Order: Halobacteriales (80%)
15 12265 bp 65.56 16.07 83.82
sw_12_scaffold_714
Genus: Halococcus (60.87%)
23 16408 bp 64.72 16.06 78.15
sw_12_scaffold_6456
Order: Halobacteriales (57.14%)
7 4432 bp 65.25 16.04 89.89
sw_12_scaffold_561
Class: Halobacteria (76.47%)
17 13046 bp 66.80 16.04 83.73
sw_12_scaffold_724
Genus: Halococcus (50%)
8 7830 bp 63.61 16.04 82.76
sw_12_scaffold_275
Order: Halobacteriales (62.07%)
29 30596 bp 65.11 16.00 84.62
sw_12_scaffold_582
Class: Halobacteria (62.07%)
29 26684 bp 64.26 15.99 78.98
sw_12_scaffold_1079
Order: Halobacteriales (62.96%)
27 22567 bp 64.24 15.98 80.19
sw_12_scaffold_176
Order: Halobacteriales (54.84%)
31 29474 bp 64.29 15.98 83.95
sw_12_scaffold_4099
Class: Halobacteria (50%)
10 6135 bp 65.46 15.97 70.27
sw_12_scaffold_174
Class: Halobacteria (86.84%)
38 39892 bp 63.79 15.97 86.39
sw_12_scaffold_1250
Order: Halobacteriales (62.5%)
24 14901 bp 66.14 15.96 83.33
sw_12_scaffold_1917
Class: Halobacteria (87.5%)
8 6790 bp 63.73 15.95 86.02
sw_12_scaffold_514
Order: Halobacteriales (58.7%)
46 44376 bp 65.09 15.95 83.00
sw_12_scaffold_793
Genus: Halococcus (50%)
10 11629 bp 65.49 15.94 81.62
sw_12_scaffold_1577
Order: Halobacteriales (50%)
12 5644 bp 62.60 15.93 85.47
sw_12_scaffold_1600
Order: Haloferacales (60%)
5 6399 bp 66.04 15.92 84.15
sw_12_scaffold_292
Class: Halobacteria (68.42%)
19 17011 bp 66.16 15.91 83.61
sw_12_scaffold_1271
Class: Halobacteria (71.43%)
14 11433 bp 63.67 15.90 82.60
sw_12_scaffold_9256
Class: Halobacteria (50%)
8 6088 bp 64.27 15.90 67.61
sw_12_scaffold_253
Class: Halobacteria (84.21%)
19 14621 bp 66.06 15.90 87.78
sw_12_scaffold_2389
Order: Halobacteriales (57.14%)
7 6767 bp 64.24 15.84 90.44
sw_12_scaffold_312
Genus: Halococcus (50%)
20 23682 bp 65.05 15.83 78.77
sw_12_scaffold_752
Class: Halobacteria (90%)
10 11652 bp 65.25 15.82 77.14
Displaying items 51-100 of 226 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.