ggKbase home page

SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

SCNPILOT_CONT_300_BF_Pseudonocardia_72_23
SCNPILOT_CONT_500_BF_Pseudonocardiales_72_84
In projects: SCNPILOT_CONT_500_BF

Consensus taxonomy: Pseudonocardiales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Search / Filter Contigs


Partial matches in Contig names


Min-Max Range: 63.67 - 77.28


Min-Max Range: 38.83 - 104.78


Upper-bound value

<
Reset filters
Displaying items 1-50 of 202 in total
Loading...
Contig (seq size) Coding Density (%) Species Genus Order Class Phylum Domain
SCNpilot_cont_500_bf_scaffold_547
224520 bp | 79.26 x | 72.59%
0.928915
Pseudonocardia di...
33.58%
Pseudonocardia
33.96%
Pseudonocardiales
42.16%
Actinobacteria
67.91%
Actinobacteria
70.15%
Bacteria
73.51%
SCNpilot_cont_500_bf_scaffold_488
169394 bp | 90.37 x | 73.15%
0.909702
Pseudonocardia di...
56.10%
Pseudonocardia
56.10%
Pseudonocardiales
67.07%
Actinobacteria
92.68%
Actinobacteria
92.68%
Bacteria
94.51%
SCNpilot_cont_500_bf_scaffold_698
164839 bp | 88.16 x | 73.56%
0.909797
Pseudonocardia di...
36.26%
Pseudonocardia
36.26%
Pseudonocardiales
48.54%
Actinobacteria
84.80%
Actinobacteria
86.55%
Bacteria
92.40%
SCNpilot_cont_500_bf_scaffold_526
164117 bp | 74.74 x | 71.74%
0.86119
Pseudonocardia di...
53.09%
Pseudonocardia
53.09%
Pseudonocardiales
64.20%
Actinobacteria
83.95%
Actinobacteria
85.80%
Bacteria
86.42%
SCNpilot_cont_500_bf_scaffold_510
161714 bp | 91.81 x | 72.97%
0.917805
Pseudonocardia di...
64.15%
Pseudonocardia
64.15%
Pseudonocardiales
78.62%
Actinobacteria
96.23%
Actinobacteria
96.23%
Bacteria
96.86%
SCNpilot_cont_500_bf_scaffold_746
158531 bp | 88.86 x | 73.79%
0.906258
Pseudonocardia di...
73.08%
Pseudonocardia
73.08%
Pseudonocardiales
78.85%
Actinobacteria
91.67%
Actinobacteria
91.67%
Bacteria
93.59%
SCNpilot_cont_500_bf_scaffold_471
145235 bp | 89.68 x | 72.05%
0.917224
Pseudonocardia di...
70.44%
Pseudonocardia
70.44%
Pseudonocardiales
75.47%
Actinobacteria
89.94%
Actinobacteria
90.57%
Bacteria
91.82%
SCNpilot_cont_500_bf_scaffold_859
139823 bp | 88.74 x | 73.45%
0.908255
Pseudonocardia di...
43.84%
Pseudonocardia
43.84%
Pseudonocardiales
56.16%
Actinobacteria
91.78%
Actinobacteria
91.78%
Bacteria
93.84%
SCNpilot_cont_500_bf_scaffold_190
136367 bp | 82.65 x | 70.86%
0.913813
unknown
8.82%
Mycobacterium
27.21%
Corynebacteriales
31.62%
Actinobacteria
73.53%
Actinobacteria
75.00%
Bacteria
89.71%
SCNpilot_cont_500_bf_scaffold_493
129541 bp | 93.41 x | 73.09%
0.919122
Pseudonocardia di...
61.43%
Pseudonocardia
61.43%
Pseudonocardiales
74.29%
Actinobacteria
90.00%
Actinobacteria
92.14%
Bacteria
94.29%
SCNpilot_cont_500_bf_scaffold_567
127300 bp | 88.10 x | 72.82%
0.948382
Pseudonocardia di...
19.51%
Pseudonocardia
19.51%
Pseudonocardiales
34.96%
Actinobacteria
86.18%
Actinobacteria
86.99%
Bacteria
95.12%
SCNpilot_cont_500_bf_scaffold_691
120736 bp | 90.73 x | 73.29%
0.900543
Pseudonocardia di...
46.51%
Pseudonocardia
46.51%
Pseudonocardiales
55.81%
Actinobacteria
85.27%
Actinobacteria
86.05%
Bacteria
86.82%
SCNpilot_cont_500_bf_scaffold_835
115333 bp | 90.92 x | 74.33%
0.923803
Pseudonocardia di...
44.34%
Pseudonocardia
44.34%
Pseudonocardiales
60.38%
Actinobacteria
87.74%
Actinobacteria
89.62%
Bacteria
92.45%
SCNpilot_cont_500_bf_scaffold_221
110434 bp | 89.02 x | 72.79%
0.912301
Pseudonocardia di...
71.82%
Pseudonocardia
71.82%
Pseudonocardiales
78.18%
Actinobacteria
91.82%
Actinobacteria
91.82%
Bacteria
91.82%
SCNpilot_cont_500_bf_scaffold_549
110087 bp | 91.21 x | 73.27%
0.907355
Pseudonocardia di...
46.85%
Pseudonocardia
46.85%
Pseudonocardiales
57.66%
Actinobacteria
82.88%
Actinobacteria
82.88%
Bacteria
87.39%
SCNpilot_cont_500_bf_scaffold_397
105471 bp | 82.70 x | 71.83%
0.898512
Pseudonocardia di...
38.66%
Pseudonocardia
38.66%
Pseudonocardiales
54.62%
Actinobacteria
80.67%
Actinobacteria
80.67%
Bacteria
82.35%
SCNpilot_cont_500_bf_scaffold_1014
105292 bp | 90.35 x | 74.62%
0.901721
Pseudonocardia di...
20.75%
Pseudonocardia
20.75%
Pseudonocardiales
38.68%
Actinobacteria
84.91%
Actinobacteria
84.91%
Bacteria
89.62%
SCNpilot_cont_500_bf_scaffold_714
102976 bp | 87.40 x | 72.47%
0.898763
Pseudonocardia di...
42.86%
Pseudonocardia
42.86%
Pseudonocardiales
60.95%
Actinobacteria
84.76%
Actinobacteria
86.67%
Bacteria
88.57%
SCNpilot_cont_500_bf_scaffold_1065
100483 bp | 91.13 x | 72.80%
0.918424
Pseudonocardia di...
63.72%
Pseudonocardia
63.72%
Pseudonocardiales
75.22%
Actinobacteria
93.81%
Actinobacteria
93.81%
Bacteria
94.69%
SCNpilot_cont_500_bf_scaffold_653
94157 bp | 91.22 x | 72.77%
0.907452
Pseudonocardia di...
53.68%
Pseudonocardia
53.68%
Pseudonocardiales
64.21%
Actinobacteria
90.53%
Actinobacteria
91.58%
Bacteria
93.68%
SCNpilot_cont_500_bf_scaffold_652
93065 bp | 89.31 x | 72.86%
0.918906
Pseudonocardia di...
66.67%
Pseudonocardia
66.67%
Pseudonocardiales
78.13%
Actinobacteria
94.79%
Actinobacteria
94.79%
Bacteria
95.83%
SCNpilot_cont_500_bf_scaffold_838
87453 bp | 91.51 x | 72.63%
0.923822
Pseudonocardia di...
39.56%
Pseudonocardia
39.56%
Pseudonocardiales
53.85%
Actinobacteria
91.21%
Actinobacteria
91.21%
Bacteria
92.31%
SCNpilot_cont_500_bf_scaffold_383
87218 bp | 87.22 x | 73.15%
0.922172
Pseudonocardia di...
71.26%
Pseudonocardia
71.26%
Pseudonocardiales
79.31%
Actinobacteria
95.40%
Actinobacteria
96.55%
Bacteria
96.55%
SCNpilot_cont_500_bf_scaffold_828
83327 bp | 88.55 x | 75.17%
0.911661
Pseudonocardia di...
48.15%
Pseudonocardia
48.15%
Pseudonocardiales
65.43%
Actinobacteria
90.12%
Actinobacteria
91.36%
Bacteria
92.59%
SCNpilot_cont_500_bf_scaffold_982
83079 bp | 87.65 x | 72.60%
0.871436
Pseudonocardia di...
58.14%
Pseudonocardia
58.14%
Pseudonocardiales
63.95%
Actinobacteria
82.56%
Actinobacteria
83.72%
Bacteria
83.72%
SCNpilot_cont_500_bf_scaffold_575
75261 bp | 89.85 x | 73.30%
0.927891
Pseudonocardia di...
52.63%
Pseudonocardia
52.63%
Pseudonocardiales
77.63%
Actinobacteria
90.79%
Actinobacteria
90.79%
Bacteria
93.42%
SCNpilot_cont_500_bf_scaffold_660
74764 bp | 85.04 x | 71.55%
0.92812
Mycobacterium len...
48.53%
Mycobacterium
55.88%
Corynebacteriales
64.71%
Actinobacteria
85.29%
Actinobacteria
88.24%
Bacteria
97.06%
SCNpilot_cont_500_bf_scaffold_1923
73976 bp | 92.21 x | 72.89%
0.925503
Pseudonocardia di...
72.00%
Pseudonocardia
72.00%
Pseudonocardiales
78.67%
Actinobacteria
92.00%
Actinobacteria
93.33%
Bacteria
94.67%
SCNpilot_cont_500_bf_scaffold_544
72363 bp | 93.72 x | 73.48%
0.939513
Pseudonocardia di...
54.43%
Pseudonocardia
54.43%
Pseudonocardiales
69.62%
Actinobacteria
89.87%
Actinobacteria
91.14%
Bacteria
92.41%
SCNpilot_cont_500_bf_scaffold_1221
72034 bp | 70.88 x | 72.38%
0.869714
Pseudonocardia di...
50.00%
Pseudonocardia
50.00%
Pseudonocardiales
58.82%
Actinobacteria
83.82%
Actinobacteria
83.82%
Bacteria
83.82%
SCNpilot_cont_500_bf_scaffold_1540
69793 bp | 90.80 x | 73.07%
0.909203
Pseudonocardia di...
53.73%
Pseudonocardia
53.73%
Pseudonocardiales
65.67%
Actinobacteria
85.07%
Actinobacteria
85.07%
Bacteria
88.06%
SCNpilot_cont_500_bf_scaffold_735
68568 bp | 85.33 x | 73.13%
0.920721
Pseudonocardia di...
26.47%
Pseudonocardia
26.47%
Pseudonocardiales
54.41%
Actinobacteria
89.71%
Actinobacteria
92.65%
Bacteria
94.12%
SCNpilot_cont_500_bf_scaffold_733
67971 bp | 82.73 x | 70.84%
0.888452
Pseudonocardia di...
51.43%
Pseudonocardia
51.43%
Pseudonocardiales
61.43%
Actinobacteria
90.00%
Actinobacteria
90.00%
Bacteria
92.86%
SCNpilot_cont_500_bf_scaffold_368
67054 bp | 50.35 x | 71.50%
0.875205
Pseudonocardia di...
18.67%
unknown
30.67%
unknown
29.33%
Actinobacteria
72.00%
Actinobacteria
73.33%
Bacteria
77.33%
SCNpilot_cont_500_bf_scaffold_2149
66002 bp | 85.21 x | 73.02%
0.864883
unknown
18.75%
unknown
18.75%
Pseudonocardiales
29.69%
Actinobacteria
78.13%
Actinobacteria
78.13%
Bacteria
79.69%
SCNpilot_cont_500_bf_scaffold_1577
65451 bp | 87.96 x | 72.08%
0.897603
Pseudonocardia di...
72.31%
Pseudonocardia
72.31%
Pseudonocardiales
87.69%
Actinobacteria
92.31%
Actinobacteria
92.31%
Bacteria
93.85%
SCNpilot_cont_500_bf_scaffold_609
57731 bp | 85.09 x | 72.63%
0.926279
Pseudonocardia di...
26.67%
Pseudonocardia
26.67%
Pseudonocardiales
56.67%
Actinobacteria
90.00%
Actinobacteria
90.00%
Bacteria
91.67%
SCNpilot_cont_500_bf_scaffold_793
55659 bp | 89.11 x | 73.87%
0.941249
Mycobacterium tub...
9.26%
unknown
22.22%
Pseudonocardiales
27.78%
Actinobacteria
70.37%
Actinobacteria
72.22%
Bacteria
92.59%
SCNpilot_cont_500_bf_scaffold_1480
53754 bp | 87.04 x | 72.25%
0.898482
Pseudonocardia di...
38.18%
Pseudonocardia
38.18%
Pseudonocardiales
56.36%
Actinobacteria
83.64%
Actinobacteria
85.45%
Bacteria
92.73%
SCNpilot_cont_500_bf_scaffold_2061
53637 bp | 84.68 x | 73.07%
0.916103
Pseudonocardia di...
36.07%
Pseudonocardia
36.07%
Pseudonocardiales
54.10%
Actinobacteria
81.97%
Actinobacteria
85.25%
Bacteria
88.52%
SCNpilot_cont_500_bf_scaffold_489
52949 bp | 48.00 x | 67.05%
0.876749
unknown
31.37%
unknown
35.29%
Pseudonocardiales
39.22%
Actinobacteria
60.78%
Actinobacteria
60.78%
Bacteria
66.67%
SCNpilot_cont_500_bf_scaffold_1565
52577 bp | 88.61 x | 73.30%
0.929266
Pseudonocardia di...
37.50%
Pseudonocardia
37.50%
Pseudonocardiales
66.67%
Actinobacteria
97.92%
Actinobacteria
97.92%
Bacteria
100.00%
SCNpilot_cont_500_bf_scaffold_726
52234 bp | 93.31 x | 73.48%
0.930696
Pseudonocardia di...
40.00%
Pseudonocardia
40.00%
Pseudonocardiales
50.91%
Actinobacteria
87.27%
Actinobacteria
87.27%
Bacteria
89.09%
SCNpilot_cont_500_bf_scaffold_2189
51726 bp | 90.70 x | 73.34%
0.890539
Pseudonocardia di...
32.73%
Pseudonocardia
32.73%
Pseudonocardiales
43.64%
Actinobacteria
81.82%
Actinobacteria
81.82%
Bacteria
87.27%
SCNpilot_cont_500_bf_scaffold_497
51650 bp | 90.88 x | 73.01%
0.942807
Pseudonocardia di...
75.56%
Pseudonocardia
75.56%
Pseudonocardiales
84.44%
Actinobacteria
100.00%
Actinobacteria
100.00%
Bacteria
100.00%
SCNpilot_cont_500_bf_scaffold_941
51591 bp | 85.62 x | 71.80%
0.888701
Pseudonocardia di...
38.98%
Pseudonocardia
38.98%
Pseudonocardiales
47.46%
Actinobacteria
84.75%
Actinobacteria
84.75%
Bacteria
88.14%
SCNpilot_cont_500_bf_scaffold_498
51385 bp | 79.75 x | 70.55%
0.910363
Pseudonocardia di...
35.00%
Pseudonocardia
35.00%
Pseudonocardiales
40.00%
Actinobacteria
72.50%
Actinobacteria
75.00%
Bacteria
87.50%
SCNpilot_cont_500_bf_scaffold_536
50992 bp | 84.00 x | 72.26%
0.940559
Pseudonocardia di...
24.49%
Pseudonocardia
24.49%
Pseudonocardiales
30.61%
Actinobacteria
85.71%
Actinobacteria
85.71%
Bacteria
89.80%
SCNpilot_cont_500_bf_scaffold_517
50532 bp | 93.05 x | 73.25%
0.910611
Pseudonocardia di...
66.67%
Pseudonocardia
66.67%
Pseudonocardiales
77.08%
Actinobacteria
87.50%
Actinobacteria
87.50%
Bacteria
93.75%
SCNpilot_cont_500_bf_scaffold_1175
50286 bp | 92.66 x | 74.57%
0.94052
Pseudonocardia di...
31.25%
Pseudonocardia
31.25%
Pseudonocardiales
43.75%
Actinobacteria
79.17%
Actinobacteria
79.17%
Bacteria
89.58%
Displaying items 1-50 of 202 in total