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ACD18

Rifle_ACD_RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated_32_1
In projects: Rifle_ACD  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated  →  Magasanikbacteria  →  Parcubacteria  →  Bacteria

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 43.39 Kbp Bin length: 1.28 Mbp GC content: 31.95 %
Contigs count: 188 Features count: 1286 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38

Description

OD1

Displaying items 1-50 of 188 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ACD18_1 ACD18_121088.2090.5
Species: uncultured bacterium (66.67%)
3 2124 bp 31.26 1.00 67.51
done Jill Banfield (11/15/12)
ACD18_2 ACD18_20827.9510.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (62.5%)
8 9550 bp 33.45 1.00 82.08
done Jill Banfield (11/15/12)
ACD18_3 ACD18_133091.2099.5
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
3 2133 bp 28.04 1.00 76.51
done Jill Banfield (11/15/12)
ACD18_4 ACD18_1947.11272.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (73.33%)
15 11318 bp 32.74 1.00 75.17
done Jill Banfield (11/15/12)
ACD18_5 ACD18_3293.13731.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (78.57%)
14 13771 bp 33.64 1.00 79.43
done Jill Banfield (11/15/12)
ACD18_6 ACD18_217025.5997.5
Species: uncultured bacterium (100%)
7 6031 bp 32.37 1.00 64.12
done Jill Banfield (11/15/12)
ACD18_7 ACD18_899.4660.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
7 4706 bp 31.43 1.00 81.98
done Jill Banfield (11/15/12)
ACD18_8 ACD18_60.4906.23
Species: uncultured bacterium (75%)
8 4952 bp 29.89 1.00 91.11
done Jill Banfield (11/15/12)
ACD18_9 ACD18_16434.3624.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (83.33%)
6 3664 bp 31.25 1.00 73.77
done Jill Banfield (11/15/12)
ACD18_10 ACD18_2235.12250.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (57.14%)
14 12290 bp 32.01 1.00 89.46
done Jill Banfield (11/15/12)
ACD18_11 ACD18_2064.29034.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (55%)
20 29074 bp 31.97 1.00 88.44
done Jill Banfield (11/15/12)
ACD18_12 ACD18_1245.6149.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 6189 bp 32.07 1.00 85.46
done Jill Banfield (11/15/12)
ACD18_13 ACD18_73881.2575.5
Species: uncultured bacterium (100%)
4 2609 bp 32.31 1.00 94.86
done Jill Banfield (11/15/12)
ACD18_14 ACD18_3787.3857.20
Species: uncultured bacterium (100%)
4 3897 bp 33.69 1.00 78.83
done Jill Banfield (11/15/12)
ACD18_15 ACD18_3062.4996.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 5042 bp 30.35 1.00 92.70
done Jill Banfield (11/15/12)
ACD18_16 ACD18_1979.3067.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 3113 bp 30.49 1.00 90.59
done Jill Banfield (11/15/12)
ACD18_17 ACD18_7077.13457.22
Species: uncultured bacterium (66.67%)
12 13497 bp 32.53 1.00 82.91
done Jill Banfield (11/15/12)
ACD18_18 ACD18_38417.22030.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (65.22%)
23 22070 bp 32.81 1.00 83.23
done Jill Banfield (11/15/12)
ACD18_19 ACD18_8854.4932.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 4972 bp 34.79 1.00 84.65
done Jill Banfield (11/15/12)
ACD18_20 ACD18_3082.2757.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 2803 bp 27.54 1.00 80.06
done Jill Banfield (11/15/12)
ACD18_21 ACD18_1350.16600.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (76.47%)
17 16640 bp 31.62 1.00 84.28
done Jill Banfield (11/15/12)
ACD18_22 ACD18_23361.2552.17
Species: uncultured bacterium (100%)
4 2592 bp 32.52 1.00 51.27
done Jill Banfield (11/15/12)
ACD18_23 ACD18_242.30582.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75.68%)
37 30622 bp 31.47 1.00 90.12
done Jill Banfield (11/15/12)
ACD18_24 ACD18_118085.3572.5
Species: uncultured bacterium (100%)
5 3606 bp 30.48 1.00 88.94
done Jill Banfield (11/15/12)
ACD18_25 ACD18_24595.2617.5
Species: uncultured bacterium (100%)
3 2651 bp 30.33 1.00 78.42
done Jill Banfield (11/15/12)
ACD18_26 ACD18_459.6426.19
Species: uncultured bacterium (100%)
4 6466 bp 35.26 1.00 93.21
done Jill Banfield (11/15/12)
ACD18_27 ACD18_12617.17542.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
10 17582 bp 34.70 1.00 88.61
done Jill Banfield (11/15/12)
ACD18_28 ACD18_544.6300.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 6340 bp 28.58 1.00 57.82
done Jill Banfield (11/15/12)
ACD18_29 ACD18_215.21151.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60.87%)
23 21191 bp 31.68 1.00 84.76
done Jill Banfield (11/15/12)
ACD18_30 ACD18_770.43352.24
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
33 43392 bp 30.20 1.00 92.26
done Jill Banfield (11/15/12)
ACD18_31 ACD18_87053.2788.6
Species: uncultured bacterium (100%)
3 2822 bp 29.20 1.00 74.20
done Jill Banfield (11/15/12)
ACD18_32 ACD18_24801.2867.5
Species: uncultured bacterium (100%)
4 2901 bp 33.44 1.00 98.45
done Jill Banfield (11/15/12)
ACD18_33 ACD18_1774.4492.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 4532 bp 30.91 1.00 95.19
done Jill Banfield (11/15/12)
ACD18_34 ACD18_26347.11769.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (78.57%)
14 11809 bp 33.83 1.00 66.05
done Jill Banfield (11/15/12)
ACD18_35 ACD18_1638.8791.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
11 8831 bp 31.04 1.00 83.87
done Jill Banfield (11/15/12)
ACD18_36 ACD18_1371.18886.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (63.64%)
22 18926 bp 33.21 1.00 91.72
done Jill Banfield (11/15/12)
ACD18_37 ACD18_2878.11776.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (54.55%)
11 11816 bp 32.60 1.00 83.00
done Jill Banfield (11/15/12)
ACD18_38 ACD18_41.6488.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (88.89%)
9 6528 bp 32.29 1.00 73.99
done Jill Banfield (11/15/12)
ACD18_39 ACD18_7129.39938.22
Species: uncultured bacterium (54.05%)
37 39978 bp 31.03 1.00 91.06
done Jill Banfield (11/15/12)
ACD18_40 ACD18_241.4324.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
6 4370 bp 31.24 1.00 84.99
done Jill Banfield (11/15/12)
ACD18_41 ACD18_425.5690.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (85.71%)
7 5730 bp 32.84 1.00 96.18
done Jill Banfield (11/15/12)
ACD18_42 ACD18_326662.2070.4
Species: uncultured bacterium (66.67%)
3 2104 bp 30.18 1.00 62.02
done Jill Banfield (11/15/12)
ACD18_43 ACD18_983.37538.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (77.14%)
35 37578 bp 32.35 1.00 88.71
done Jill Banfield (11/15/12)
ACD18_44 ACD18_3480.5304.5
Species: uncultured bacterium (100%)
7 5338 bp 30.74 1.00 96.16
done Jill Banfield (11/15/12)
ACD18_45 ACD18_3661.11636.21
Species: uncultured bacterium (100%)
9 11682 bp 28.64 1.00 82.92
done Jill Banfield (11/15/12)
ACD18_46 ACD18_24211.2319.5
Species: uncultured bacterium (100%)
3 2353 bp 33.74 1.00 84.28
done Jill Banfield (11/15/12)
ACD18_47 ACD18_11328.16293.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (59.26%)
27 16333 bp 32.54 1.00 87.63
done Jill Banfield (11/15/12)
ACD18_48 ACD18_2326.9685.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (70%)
10 9731 bp 30.84 1.00 78.46
done Jill Banfield (11/15/12)
ACD18_49 ACD18_21787.35852.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (80.77%)
26 35892 bp 31.75 1.00 93.44
done Jill Banfield (11/15/12)
ACD18_50 ACD18_361.7203.23
Species: uncultured bacterium (55.56%)
9 7243 bp 30.10 1.00 81.43
done Jill Banfield (11/15/12)
Displaying items 1-50 of 188 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.