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ACD18

Rifle_ACD_RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated_32_1
In projects: Rifle_ACD  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated  →  Magasanikbacteria  →  Parcubacteria  →  Bacteria

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 43.39 Kbp Bin length: 1.28 Mbp GC content: 31.95 %
Contigs count: 188 Features count: 1286 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38

Description

OD1

Displaying items 1-50 of 188 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ACD18_29 ACD18_215.21151.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60.87%)
23 21191 bp 31.68 1.00 84.76
done Jill Banfield (11/15/12)
ACD18_30 ACD18_770.43352.24
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
33 43392 bp 30.20 1.00 92.26
done Jill Banfield (11/15/12)
ACD18_31 ACD18_87053.2788.6
Species: uncultured bacterium (100%)
3 2822 bp 29.20 1.00 74.20
done Jill Banfield (11/15/12)
ACD18_32 ACD18_24801.2867.5
Species: uncultured bacterium (100%)
4 2901 bp 33.44 1.00 98.45
done Jill Banfield (11/15/12)
ACD18_33 ACD18_1774.4492.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 4532 bp 30.91 1.00 95.19
done Jill Banfield (11/15/12)
ACD18_34 ACD18_26347.11769.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (78.57%)
14 11809 bp 33.83 1.00 66.05
done Jill Banfield (11/15/12)
ACD18_35 ACD18_1638.8791.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
11 8831 bp 31.04 1.00 83.87
done Jill Banfield (11/15/12)
ACD18_36 ACD18_1371.18886.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (63.64%)
22 18926 bp 33.21 1.00 91.72
done Jill Banfield (11/15/12)
ACD18_37 ACD18_2878.11776.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (54.55%)
11 11816 bp 32.60 1.00 83.00
done Jill Banfield (11/15/12)
ACD18_38 ACD18_41.6488.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (88.89%)
9 6528 bp 32.29 1.00 73.99
done Jill Banfield (11/15/12)
ACD18_39 ACD18_7129.39938.22
Species: uncultured bacterium (54.05%)
37 39978 bp 31.03 1.00 91.06
done Jill Banfield (11/15/12)
ACD18_40 ACD18_241.4324.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
6 4370 bp 31.24 1.00 84.99
done Jill Banfield (11/15/12)
ACD18_41 ACD18_425.5690.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (85.71%)
7 5730 bp 32.84 1.00 96.18
done Jill Banfield (11/15/12)
ACD18_42 ACD18_326662.2070.4
Species: uncultured bacterium (66.67%)
3 2104 bp 30.18 1.00 62.02
done Jill Banfield (11/15/12)
ACD18_43 ACD18_983.37538.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (77.14%)
35 37578 bp 32.35 1.00 88.71
done Jill Banfield (11/15/12)
ACD18_44 ACD18_3480.5304.5
Species: uncultured bacterium (100%)
7 5338 bp 30.74 1.00 96.16
done Jill Banfield (11/15/12)
ACD18_45 ACD18_3661.11636.21
Species: uncultured bacterium (100%)
9 11682 bp 28.64 1.00 82.92
done Jill Banfield (11/15/12)
ACD18_46 ACD18_24211.2319.5
Species: uncultured bacterium (100%)
3 2353 bp 33.74 1.00 84.28
done Jill Banfield (11/15/12)
ACD18_47 ACD18_11328.16293.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (59.26%)
27 16333 bp 32.54 1.00 87.63
done Jill Banfield (11/15/12)
ACD18_48 ACD18_2326.9685.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (70%)
10 9731 bp 30.84 1.00 78.46
done Jill Banfield (11/15/12)
ACD18_49 ACD18_21787.35852.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (80.77%)
26 35892 bp 31.75 1.00 93.44
done Jill Banfield (11/15/12)
ACD18_50 ACD18_361.7203.23
Species: uncultured bacterium (55.56%)
9 7243 bp 30.10 1.00 81.43
done Jill Banfield (11/15/12)
ACD18_51 ACD18_3123.4790.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 4836 bp 31.12 1.00 94.73
done Jill Banfield (11/15/12)
ACD18_52 ACD18_187606.2435.4
Species: uncultured bacterium (66.67%)
3 2469 bp 28.96 1.00 39.49
done Jill Banfield (11/15/12)
ACD18_53 ACD18_19173.9357.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (55.56%)
9 9397 bp 31.93 1.00 77.29
done Jill Banfield (11/15/12)
ACD18_54 ACD18_230.4448.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
4 4488 bp 30.79 1.00 95.05
done Jill Banfield (11/15/12)
ACD18_55 ACD18_736.26253.24
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (85%)
20 26293 bp 32.18 1.00 84.07
done Jill Banfield (11/15/12)
ACD18_56 ACD18_8207.6123.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 6163 bp 30.52 1.00 92.73
done Jill Banfield (11/15/12)
ACD18_57 ACD18_359.11295.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
12 11335 bp 33.33 1.00 88.53
done Jill Banfield (11/15/12)
ACD18_58 ACD18_1753.2742.23
Species: uncultured bacterium (75%)
4 2788 bp 30.24 1.00 98.35
done Jill Banfield (11/15/12)
ACD18_59 ACD18_28437.2186.5
Species: uncultured bacterium (100%)
3 2220 bp 31.13 1.00 92.57
done Jill Banfield (11/15/12)
ACD18_60 ACD18_87037.2318.5
Species: uncultured bacterium (100%)
3 2352 bp 32.99 1.00 66.96
done Jill Banfield (11/15/12)
ACD18_61 ACD18_101906.2675.5
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 2709 bp 34.37 1.00 90.59
done Jill Banfield (11/15/12)
ACD18_62 ACD18_4449.4073.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 4113 bp 31.36 1.00 64.77
done Jill Banfield (11/15/12)
ACD18_63 ACD18_138274.2613.5
Species: uncultured bacterium (100%)
4 2647 bp 31.36 1.00 51.00
done Jill Banfield (11/15/12)
ACD18_64 ACD18_307.15662.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (90%)
10 15702 bp 32.38 1.00 94.44
done Jill Banfield (11/15/12)
ACD18_65 ACD18_144155.2125.5
Species: uncultured bacterium (100%)
3 2159 bp 27.93 1.00 82.12
done Jill Banfield (11/15/12)
ACD18_66 ACD18_23735.4126.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
6 4166 bp 31.57 1.00 98.58
done Jill Banfield (11/15/12)
ACD18_67 ACD18_321.5596.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 5636 bp 33.16 1.00 85.33
done Jill Banfield (11/15/12)
ACD18_68 ACD18_35665.4021.5
Species: uncultured bacterium (100%)
2 4055 bp 33.76 1.00 39.51
done Jill Banfield (11/15/12)
ACD18_69 ACD18_39129.5736.6
Species: uncultured bacterium (87.5%)
8 5770 bp 34.35 1.00 71.07
done Jill Banfield (11/15/12)
ACD18_70 ACD18_12940.6192.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 6232 bp 33.01 1.00 79.19
done Jill Banfield (11/15/12)
ACD18_71 ACD18_25181.16825.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (69.23%)
13 16865 bp 32.43 1.00 88.59
done Jill Banfield (11/15/12)
ACD18_72 ACD18_61444.3138.6
Species: uncultured bacterium (100%)
4 3172 bp 29.26 1.00 95.43
done Jill Banfield (11/15/12)
ACD18_73 ACD18_107428.2116.5
Species: uncultured bacterium (66.67%)
3 2150 bp 30.56 1.00 93.35
done Jill Banfield (11/15/12)
ACD18_74 ACD18_123610.2209.5
Species: uncultured bacterium (100%)
2 2243 bp 32.68 1.00 92.82
done Jill Banfield (11/15/12)
ACD18_75 ACD18_1838.8437.22
Species: uncultured bacterium (100%)
6 8477 bp 32.48 1.00 85.11
done Jill Banfield (11/15/12)
ACD18_76 ACD18_2950.6737.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (87.5%)
8 6783 bp 29.51 1.00 88.77
done Jill Banfield (11/15/12)
ACD18_77 ACD18_863.12635.23
Species: uncultured bacterium (55.56%)
9 12675 bp 32.64 1.00 93.04
done Jill Banfield (11/15/12)
ACD18_78 ACD18_580.6818.23
Species: uncultured bacterium (100%)
6 6858 bp 31.58 1.00 93.48
done Jill Banfield (11/15/12)
Displaying items 1-50 of 188 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.