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GD2018-4_B1_QB3_180703_Deltaproteobacteria_71_13

In projects: GD2018-4_B1_QB3_180703  |  genasci-metabolism  |  all_nc_groundwater_genomes

Consensus taxonomy: Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: GD2018-4_B1_QB3_180703_UNK

Properties

Avg. coverage: 13.29 Longest contig: 223.86 Kbp Bin length: 9.59 Mbp GC content: 71.15 %
Contigs count: 226 Features count: 8394 rRNAs count: 0 tRNAs count: 54

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38

Description

GD18-4_B1_Maxbin2_417_IF

Displaying items 101-150 of 226 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
GD18-4_B1_scaffold_930124
Order: Myxococcales (75%)
12 15071 bp 71.62 12.79 90.53
GD18-4_B1_scaffold_530395
Domain: Bacteria (62.96%)
27 25803 bp 71.67 12.92 90.52
GD18-4_B1_scaffold_373975 40 42281 bp 72.30 13.56 90.52
GD18-4_B1_scaffold_202707
Species: Sorangium cellulosum (50%)
24 25706 bp 71.28 12.62 90.50
GD18-4_B1_scaffold_140815
Phylum: Proteobacteria (56.52%)
23 19045 bp 71.70 14.10 90.50
GD18-4_B1_scaffold_356800
Order: Myxococcales (85%)
40 61252 bp 71.31 13.08 90.47
GD18-4_B1_scaffold_623425
Class: Deltaproteobacteria (61.54%)
13 14388 bp 70.53 12.68 90.41
GD18-4_B1_scaffold_346740
Order: Myxococcales (50%)
62 75743 bp 71.35 13.73 90.41
GD18-4_B1_scaffold_1920824
Domain: Bacteria (71.43%)
14 15324 bp 70.94 12.85 90.41
GD18-4_B1_scaffold_1851127
Order: Myxococcales (55%)
20 21324 bp 72.00 13.91 90.41
GD18-4_B1_scaffold_972909
Class: Deltaproteobacteria (66.67%)
3 5248 bp 69.82 13.98 90.38
GD18-4_B1_scaffold_105584
Domain: Bacteria (61.07%)
149 146874 bp 68.85 12.98 90.35
GD18-4_B1_scaffold_1633581
Phylum: Proteobacteria (64.71%)
17 17077 bp 71.44 13.78 90.28
GD18-4_B1_scaffold_619410
Order: Myxococcales (51.61%)
31 39793 bp 70.04 13.09 90.27
GD18-4_B1_scaffold_1181155
Class: Deltaproteobacteria (50%)
70 90631 bp 70.13 13.66 90.24
GD18-4_B1_scaffold_188600
Order: Myxococcales (50%)
74 86240 bp 71.60 13.32 90.20
GD18-4_B1_scaffold_961887
Class: Deltaproteobacteria (52.5%)
40 53449 bp 71.52 13.43 90.18
GD18-4_B1_scaffold_1769599
Order: Myxococcales (65.79%)
38 46587 bp 71.84 13.02 90.14
GD18-4_B1_scaffold_420910
Class: Deltaproteobacteria (51.11%)
90 95512 bp 70.92 13.07 89.99
GD18-4_B1_scaffold_477404
Order: Myxococcales (50%)
8 12323 bp 71.18 12.48 89.95
GD18-4_B1_scaffold_499893
Domain: Bacteria (63.64%)
11 9738 bp 69.37 12.74 89.93
GD18-4_B1_scaffold_90633
Class: Deltaproteobacteria (55.43%)
92 104392 bp 70.57 13.14 89.82
GD18-4_B1_scaffold_1805792
Class: Deltaproteobacteria (59.26%)
27 39101 bp 71.19 13.37 89.79
GD18-4_B1_scaffold_424991
Phylum: Proteobacteria (53.1%)
113 130300 bp 72.05 13.80 89.76
GD18-4_B1_scaffold_14495
Order: Myxococcales (71.08%)
83 108913 bp 70.44 12.72 89.70
GD18-4_B1_scaffold_1496736
Species: Sorangium cellulosum (50%)
14 16820 bp 71.12 12.87 89.70
GD18-4_B1_scaffold_33235
Order: Myxococcales (53.33%)
15 15685 bp 69.06 12.84 89.68
GD18-4_B1_scaffold_391579
Order: Myxococcales (58.7%)
46 51979 bp 71.15 13.16 89.67
GD18-4_B1_scaffold_207179
Phylum: Proteobacteria (53.13%)
128 135391 bp 70.87 13.24 89.66
GD18-4_B1_scaffold_1471482
Domain: Bacteria (66.67%)
3 3759 bp 70.60 11.65 89.62
GD18-4_B1_scaffold_1240420
Domain: Bacteria (76.92%)
13 17949 bp 70.91 13.36 89.60
GD18-4_B1_scaffold_785303
Class: Deltaproteobacteria (51.85%)
27 30846 bp 71.23 13.40 89.58
GD18-4_B1_scaffold_658300
Phylum: Proteobacteria (50.44%)
113 117928 bp 72.01 13.04 89.57
GD18-4_B1_scaffold_16643
Phylum: Proteobacteria (61.11%)
36 42441 bp 70.35 13.12 89.52
GD18-4_B1_scaffold_1195604
Order: Myxococcales (60%)
5 11807 bp 71.97 13.09 89.51
GD18-4_B1_scaffold_1206697
Species: Sandaracinus amylolyticus (66.67%)
3 3139 bp 69.10 11.80 89.46
GD18-4_B1_scaffold_323816
Order: Myxococcales (59.38%)
64 87112 bp 71.51 13.29 89.36
GD18-4_B1_scaffold_553081
Phylum: Proteobacteria (53.57%)
28 28233 bp 71.20 13.11 89.35
GD18-4_B1_scaffold_373238
Order: Myxococcales (52.38%)
21 25950 bp 70.81 13.85 89.26
GD18-4_B1_scaffold_2069364
Order: Myxococcales (57.14%)
14 9571 bp 72.51 12.21 89.21
GD18-4_B1_scaffold_78125
Order: Myxococcales (52.98%)
151 159232 bp 70.71 13.48 89.18
GD18-4_B1_scaffold_515021
Order: Myxococcales (50%)
18 16481 bp 72.05 13.83 89.14
GD18-4_B1_scaffold_27299
Species: Sorangium cellulosum (51.43%)
35 39384 bp 71.19 12.70 89.13
GD18-4_B1_scaffold_109355
Class: Deltaproteobacteria (51.52%)
33 31854 bp 71.83 13.11 89.09
GD18-4_B1_scaffold_44781
Class: Deltaproteobacteria (51.61%)
93 96793 bp 71.24 13.29 89.07
GD18-4_B1_scaffold_1940498 24 21509 bp 70.55 14.13 89.07
GD18-4_B1_scaffold_821888
Order: Myxococcales (53.52%)
71 80054 bp 70.91 13.44 89.05
GD18-4_B1_scaffold_139402
Order: Myxococcales (50%)
188 223861 bp 71.38 13.26 89.01
GD18-4_B1_scaffold_748596
Order: Myxococcales (55.81%)
43 43172 bp 70.56 13.85 89.00
GD18-4_B1_scaffold_1842519
Domain: Bacteria (62.5%)
32 34355 bp 70.14 13.54 88.97
Displaying items 101-150 of 226 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.