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SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8

SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8 SCNPILOT_CONT_1000_P_Bacteria_61_8
In projects: SCNPILOT_CONT_1000_P

Consensus taxonomy: Bacteria

Taxonomy override: Verrucomicrobia

Description

from TS-ESOM (all the double-copy SCGs are actually just split genes on ends of contigs or incorrect annotations)

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Partial matches in Contig names

Min-Max Range: 22.2 - 76.05

Min-Max Range: 2.08 - 16.5

Upper-bound value
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Displaying items 1-50 of 407 in total
Contig (seq size) Coding Density (%) Species Genus Order Class Phylum Domain
SCNpilot_cont_1000_p_scaffold_316
89511 bp | 9.52 x | 62.97%
0.969166
Chthoniobacter fl...
15.07%
unknown
39.73%
unknown
52.05%
unknown
27.40%
Proteobacteria
27.40%
Bacteria
86.30%
SCNpilot_cont_1000_p_scaffold_780
76377 bp | 9.49 x | 61.14%
0.935033
Chthoniobacter fl...
17.24%
unknown
58.62%
unknown
53.45%
unknown
36.21%
Verrucomicrobia
44.83%
Bacteria
84.48%
SCNpilot_cont_1000_p_scaffold_733
67616 bp | 9.88 x | 62.44%
0.951165
Chthoniobacter fl...
20.00%
unknown
53.33%
unknown
43.33%
Opitutae
36.67%
Verrucomicrobia
60.00%
Bacteria
91.67%
SCNpilot_cont_1000_p_scaffold_506
64224 bp | 10.54 x | 64.22%
0.914004
unknown
33.90%
unknown
77.97%
unknown
50.85%
unknown
40.68%
Verrucomicrobia
37.29%
Bacteria
64.41%
SCNpilot_cont_1000_p_scaffold_949
59862 bp | 9.75 x | 55.80%
0.914553
unknown
41.86%
unknown
79.07%
unknown
53.49%
unknown
51.16%
unknown
41.86%
Bacteria
58.14%
SCNpilot_cont_1000_p_scaffold_858
57600 bp | 9.55 x | 60.78%
0.945052
unknown
22.50%
unknown
62.50%
unknown
47.50%
unknown
35.00%
Verrucomicrobia
35.00%
Bacteria
77.50%
SCNpilot_cont_1000_p_scaffold_729
49299 bp | 8.31 x | 63.07%
0.909329
Chthoniobacter fl...
18.60%
unknown
44.19%
unknown
55.81%
Verrucomicrobiae
18.60%
Verrucomicrobia
55.81%
Bacteria
86.05%
SCNpilot_cont_1000_p_scaffold_624
48888 bp | 9.95 x | 64.37%
0.93661
unknown
29.55%
unknown
70.45%
unknown
61.36%
unknown
40.91%
Verrucomicrobia
36.36%
Bacteria
70.45%
SCNpilot_cont_1000_p_scaffold_958
47737 bp | 8.10 x | 61.60%
0.911494
unknown
17.07%
unknown
48.78%
unknown
39.02%
unknown
31.71%
Verrucomicrobia
26.83%
Bacteria
80.49%
SCNpilot_cont_1000_p_scaffold_695
44585 bp | 7.32 x | 61.25%
0.941348
Chthoniobacter fl...
20.00%
unknown
53.33%
unknown
60.00%
unknown
40.00%
Verrucomicrobia
46.67%
Bacteria
76.67%
SCNpilot_cont_1000_p_scaffold_751
42552 bp | 8.89 x | 61.65%
0.947124
Chthoniobacter fl...
30.23%
unknown
53.49%
unknown
69.77%
Spartobacteria
30.23%
Verrucomicrobia
62.79%
Bacteria
90.70%
SCNpilot_cont_1000_p_scaffold_1933
41548 bp | 8.01 x | 60.06%
0.900621
Opitutaceae bacte...
15.79%
unknown
47.37%
unknown
42.11%
unknown
31.58%
Verrucomicrobia
42.11%
Bacteria
86.84%
SCNpilot_cont_1000_p_scaffold_1100
41173 bp | 8.36 x | 61.37%
0.911884
unknown
25.00%
unknown
50.00%
unknown
72.22%
unknown
38.89%
Verrucomicrobia
36.11%
Bacteria
75.00%
SCNpilot_cont_1000_p_scaffold_764
40560 bp | 8.78 x | 61.48%
0.924408
Chthoniobacter fl...
21.21%
unknown
42.42%
unknown
48.48%
Spartobacteria
21.21%
Verrucomicrobia
69.70%
Bacteria
93.94%
SCNpilot_cont_1000_p_scaffold_766
40377 bp | 8.40 x | 62.01%
0.927186
Chthoniobacter fl...
35.29%
unknown
44.12%
unknown
73.53%
Spartobacteria
35.29%
Verrucomicrobia
55.88%
Bacteria
82.35%
SCNpilot_cont_1000_p_scaffold_792
39144 bp | 9.35 x | 57.18%
0.925123
unknown
37.74%
unknown
66.04%
unknown
58.49%
unknown
54.72%
unknown
37.74%
Bacteria
62.26%
SCNpilot_cont_1000_p_scaffold_1192
38071 bp | 10.18 x | 59.85%
0.924404
unknown
39.13%
unknown
86.96%
unknown
65.22%
unknown
60.87%
unknown
39.13%
Bacteria
56.52%
SCNpilot_cont_1000_p_scaffold_824
37645 bp | 10.19 x | 55.46%
0.896215
unknown
23.08%
unknown
73.08%
unknown
61.54%
unknown
46.15%
Verrucomicrobia
34.62%
Bacteria
76.92%
SCNpilot_cont_1000_p_scaffold_2148
37210 bp | 9.19 x | 56.32%
0.929024
unknown
45.00%
unknown
75.00%
unknown
62.50%
unknown
55.00%
unknown
45.00%
Bacteria
55.00%
SCNpilot_cont_1000_p_scaffold_872
35034 bp | 8.60 x | 58.86%
0.868128
unknown
27.78%
unknown
61.11%
unknown
66.67%
unknown
33.33%
Verrucomicrobia
47.22%
Bacteria
69.44%
SCNpilot_cont_1000_p_scaffold_877
34846 bp | 7.56 x | 62.55%
0.963554
Chthoniobacter fl...
28.57%
unknown
42.86%
unknown
67.86%
unknown
32.14%
Verrucomicrobia
53.57%
Bacteria
85.71%
SCNpilot_cont_1000_p_scaffold_883
34776 bp | 7.73 x | 58.39%
0.97205
unknown
20.00%
unknown
46.67%
unknown
43.33%
unknown
36.67%
unknown
20.00%
Bacteria
80.00%
SCNpilot_cont_1000_p_scaffold_1277
34771 bp | 8.33 x | 58.80%
0.931293
Opitutaceae bacte...
18.75%
unknown
56.25%
unknown
46.88%
unknown
28.13%
Verrucomicrobia
43.75%
Bacteria
81.25%
SCNpilot_cont_1000_p_scaffold_943
34765 bp | 8.73 x | 61.39%
0.878815
Chthoniobacter fl...
21.05%
unknown
44.74%
unknown
60.53%
unknown
26.32%
Verrucomicrobia
52.63%
Bacteria
84.21%
SCNpilot_cont_1000_p_scaffold_889
34636 bp | 7.39 x | 56.99%
0.905128
unknown
60.00%
unknown
72.50%
unknown
75.00%
unknown
70.00%
unknown
60.00%
unknown
60.00%
SCNpilot_cont_1000_p_scaffold_2690
33508 bp | 8.71 x | 58.36%
0.832458
unknown
32.35%
unknown
58.82%
unknown
76.47%
unknown
41.18%
Verrucomicrobia
38.24%
Bacteria
64.71%
SCNpilot_cont_1000_p_scaffold_3694
32168 bp | 9.19 x | 58.48%
0.851281
unknown
29.27%
unknown
65.85%
unknown
68.29%
unknown
56.10%
Verrucomicrobia
31.71%
Bacteria
68.29%
SCNpilot_cont_1000_p_scaffold_963
32165 bp | 7.90 x | 61.88%
0.936608
RHI_Verrucumicrob...
32.26%
unknown
58.06%
unknown
77.42%
Verrucomicrobiae
35.48%
Verrucomicrobia
64.52%
Bacteria
87.10%
SCNpilot_cont_1000_p_scaffold_990
31578 bp | 9.44 x | 62.37%
0.924283
unknown
22.58%
unknown
61.29%
unknown
58.06%
unknown
29.03%
Verrucomicrobia
45.16%
Bacteria
77.42%
SCNpilot_cont_1000_p_scaffold_1006
31133 bp | 8.01 x | 57.80%
0.902419
unknown
28.13%
unknown
53.13%
unknown
56.25%
unknown
43.75%
Proteobacteria
28.13%
Bacteria
71.88%
SCNpilot_cont_1000_p_scaffold_1017
30897 bp | 10.31 x | 60.32%
0.944461
unknown
29.17%
unknown
54.17%
unknown
62.50%
unknown
37.50%
unknown
29.17%
Bacteria
66.67%
SCNpilot_cont_1000_p_scaffold_1037
30473 bp | 10.13 x | 56.71%
0.913497
unknown
30.00%
unknown
70.00%
unknown
65.00%
unknown
45.00%
Verrucomicrobia
35.00%
Bacteria
70.00%
SCNpilot_cont_1000_p_scaffold_1046
30127 bp | 7.87 x | 61.40%
0.922196
RHI_Verrucumicrob...
19.35%
unknown
48.39%
unknown
61.29%
unknown
25.81%
Verrucomicrobia
41.94%
Bacteria
87.10%
SCNpilot_cont_1000_p_scaffold_1795
29443 bp | 9.93 x | 58.47%
0.942703
Chthoniobacter fl...
40.91%
unknown
50.00%
unknown
54.55%
Spartobacteria
40.91%
Verrucomicrobia
77.27%
Bacteria
90.91%
SCNpilot_cont_1000_p_scaffold_1078
29324 bp | 7.84 x | 63.25%
0.974355
Chthoniobacter fl...
37.04%
Chthoniobacter
37.04%
unknown
66.67%
Spartobacteria
37.04%
Verrucomicrobia
70.37%
Bacteria
96.30%
SCNpilot_cont_1000_p_scaffold_1799
28878 bp | 8.41 x | 62.13%
0.944941
Opitutaceae bacte...
25.00%
unknown
45.83%
unknown
33.33%
Opitutae
29.17%
Verrucomicrobia
58.33%
Bacteria
87.50%
SCNpilot_cont_1000_p_scaffold_1094
28872 bp | 9.21 x | 61.72%
0.931629
Opitutaceae bacte...
18.52%
unknown
51.85%
unknown
37.04%
Opitutae
25.93%
Verrucomicrobia
48.15%
Bacteria
88.89%
SCNpilot_cont_1000_p_scaffold_1135
27850 bp | 8.71 x | 55.77%
0.926607
unknown
25.93%
unknown
77.78%
unknown
55.56%
unknown
51.85%
Verrucomicrobia
33.33%
Bacteria
74.07%
SCNpilot_cont_1000_p_scaffold_1139
27776 bp | 8.80 x | 60.34%
0.929507
Chthoniobacter fl...
23.53%
unknown
52.94%
unknown
70.59%
unknown
47.06%
Verrucomicrobia
35.29%
Bacteria
82.35%
SCNpilot_cont_1000_p_scaffold_1146
27646 bp | 8.83 x | 54.92%
0.927801
unknown
30.43%
unknown
69.57%
unknown
56.52%
unknown
56.52%
Verrucomicrobia
39.13%
Bacteria
69.57%
SCNpilot_cont_1000_p_scaffold_1147
27608 bp | 8.70 x | 62.76%
0.910606
unknown
17.24%
unknown
41.38%
unknown
34.48%
Alphaproteobacteria
24.14%
Proteobacteria
44.83%
Bacteria
82.76%
SCNpilot_cont_1000_p_scaffold_1167
27140 bp | 9.45 x | 61.96%
0.932719
Chthoniobacter fl...
22.73%
unknown
63.64%
unknown
54.55%
Opitutae
36.36%
Verrucomicrobia
68.18%
Bacteria
95.45%
SCNpilot_cont_1000_p_scaffold_1176
26957 bp | 9.92 x | 59.76%
0.893089
Opitutaceae bacte...
38.10%
unknown
85.71%
unknown
52.38%
Opitutae
42.86%
Verrucomicrobia
57.14%
Bacteria
71.43%
SCNpilot_cont_1000_p_scaffold_1731
26524 bp | 6.91 x | 61.85%
0.94669
Chthoniobacter fl...
34.78%
Chthoniobacter
34.78%
unknown
47.83%
Spartobacteria
34.78%
Verrucomicrobia
52.17%
Bacteria
95.65%
SCNpilot_cont_1000_p_scaffold_1236
25870 bp | 7.97 x | 61.62%
0.923541
Chthoniobacter fl...
38.89%
Chthoniobacter
38.89%
unknown
61.11%
Spartobacteria
38.89%
Verrucomicrobia
66.67%
Bacteria
100.00%
SCNpilot_cont_1000_p_scaffold_1240
25810 bp | 8.49 x | 55.78%
0.924642
unknown
45.00%
unknown
75.00%
unknown
60.00%
unknown
50.00%
Verrucomicrobia
45.00%
Bacteria
55.00%
SCNpilot_cont_1000_p_scaffold_1557
25660 bp | 9.34 x | 61.75%
0.900935
unknown
29.03%
unknown
74.19%
unknown
80.65%
unknown
41.94%
Verrucomicrobia
45.16%
Bacteria
67.74%
SCNpilot_cont_1000_p_scaffold_1259
25486 bp | 8.09 x | 61.70%
0.96912
Chthoniobacter fl...
36.00%
unknown
40.00%
unknown
72.00%
Spartobacteria
36.00%
Verrucomicrobia
68.00%
Bacteria
88.00%
SCNpilot_cont_1000_p_scaffold_1292
24780 bp | 10.19 x | 63.25%
0.946489
Opitutaceae bacte...
33.33%
unknown
66.67%
Opitutales
42.86%
Opitutae
42.86%
Verrucomicrobia
42.86%
Bacteria
90.48%
SCNpilot_cont_1000_p_scaffold_1295
24749 bp | 7.77 x | 63.34%
0.948402
unknown
25.00%
unknown
55.00%
unknown
75.00%
unknown
40.00%
Verrucomicrobia
40.00%
Bacteria
70.00%
Displaying items 1-50 of 407 in total