Consensus taxonomy: Bacteria
Taxonomy override: Verrucomicrobia
from TS-ESOM (all the double-copy SCGs are actually just split genes on ends of contigs or incorrect annotations)
Contig (seq size) | Coding Density (%) | Species | Genus | Order | Class | Phylum | Domain |
---|---|---|---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_316
89511 bp | 9.52 x | 62.97% |
0.969166 |
Chthoniobacter fl...
15.07%
|
unknown
39.73%
|
unknown
52.05%
|
unknown
27.40%
|
Proteobacteria
27.40%
|
Bacteria
86.30%
|
SCNpilot_cont_1000_p_scaffold_780
76377 bp | 9.49 x | 61.14% |
0.935033 |
Chthoniobacter fl...
17.24%
|
unknown
58.62%
|
unknown
53.45%
|
unknown
36.21%
|
Verrucomicrobia
44.83%
|
Bacteria
84.48%
|
SCNpilot_cont_1000_p_scaffold_733
67616 bp | 9.88 x | 62.44% |
0.951165 |
Chthoniobacter fl...
20.00%
|
unknown
53.33%
|
unknown
43.33%
|
Opitutae
36.67%
|
Verrucomicrobia
60.00%
|
Bacteria
91.67%
|
SCNpilot_cont_1000_p_scaffold_506
64224 bp | 10.54 x | 64.22% |
0.914004 |
unknown
33.90%
|
unknown
77.97%
|
unknown
50.85%
|
unknown
40.68%
|
Verrucomicrobia
37.29%
|
Bacteria
64.41%
|
SCNpilot_cont_1000_p_scaffold_949
59862 bp | 9.75 x | 55.80% |
0.914553 |
unknown
41.86%
|
unknown
79.07%
|
unknown
53.49%
|
unknown
51.16%
|
unknown
41.86%
|
Bacteria
58.14%
|
SCNpilot_cont_1000_p_scaffold_858
57600 bp | 9.55 x | 60.78% |
0.945052 |
unknown
22.50%
|
unknown
62.50%
|
unknown
47.50%
|
unknown
35.00%
|
Verrucomicrobia
35.00%
|
Bacteria
77.50%
|
SCNpilot_cont_1000_p_scaffold_729
49299 bp | 8.31 x | 63.07% |
0.909329 |
Chthoniobacter fl...
18.60%
|
unknown
44.19%
|
unknown
55.81%
|
Verrucomicrobiae
18.60%
|
Verrucomicrobia
55.81%
|
Bacteria
86.05%
|
SCNpilot_cont_1000_p_scaffold_624
48888 bp | 9.95 x | 64.37% |
0.93661 |
unknown
29.55%
|
unknown
70.45%
|
unknown
61.36%
|
unknown
40.91%
|
Verrucomicrobia
36.36%
|
Bacteria
70.45%
|
SCNpilot_cont_1000_p_scaffold_958
47737 bp | 8.10 x | 61.60% |
0.911494 |
unknown
17.07%
|
unknown
48.78%
|
unknown
39.02%
|
unknown
31.71%
|
Verrucomicrobia
26.83%
|
Bacteria
80.49%
|
SCNpilot_cont_1000_p_scaffold_695
44585 bp | 7.32 x | 61.25% |
0.941348 |
Chthoniobacter fl...
20.00%
|
unknown
53.33%
|
unknown
60.00%
|
unknown
40.00%
|
Verrucomicrobia
46.67%
|
Bacteria
76.67%
|
SCNpilot_cont_1000_p_scaffold_751
42552 bp | 8.89 x | 61.65% |
0.947124 |
Chthoniobacter fl...
30.23%
|
unknown
53.49%
|
unknown
69.77%
|
Spartobacteria
30.23%
|
Verrucomicrobia
62.79%
|
Bacteria
90.70%
|
SCNpilot_cont_1000_p_scaffold_1933
41548 bp | 8.01 x | 60.06% |
0.900621 |
Opitutaceae bacte...
15.79%
|
unknown
47.37%
|
unknown
42.11%
|
unknown
31.58%
|
Verrucomicrobia
42.11%
|
Bacteria
86.84%
|
SCNpilot_cont_1000_p_scaffold_1100
41173 bp | 8.36 x | 61.37% |
0.911884 |
unknown
25.00%
|
unknown
50.00%
|
unknown
72.22%
|
unknown
38.89%
|
Verrucomicrobia
36.11%
|
Bacteria
75.00%
|
SCNpilot_cont_1000_p_scaffold_764
40560 bp | 8.78 x | 61.48% |
0.924408 |
Chthoniobacter fl...
21.21%
|
unknown
42.42%
|
unknown
48.48%
|
Spartobacteria
21.21%
|
Verrucomicrobia
69.70%
|
Bacteria
93.94%
|
SCNpilot_cont_1000_p_scaffold_766
40377 bp | 8.40 x | 62.01% |
0.927186 |
Chthoniobacter fl...
35.29%
|
unknown
44.12%
|
unknown
73.53%
|
Spartobacteria
35.29%
|
Verrucomicrobia
55.88%
|
Bacteria
82.35%
|
SCNpilot_cont_1000_p_scaffold_792
39144 bp | 9.35 x | 57.18% |
0.925123 |
unknown
37.74%
|
unknown
66.04%
|
unknown
58.49%
|
unknown
54.72%
|
unknown
37.74%
|
Bacteria
62.26%
|
SCNpilot_cont_1000_p_scaffold_1192
38071 bp | 10.18 x | 59.85% |
0.924404 |
unknown
39.13%
|
unknown
86.96%
|
unknown
65.22%
|
unknown
60.87%
|
unknown
39.13%
|
Bacteria
56.52%
|
SCNpilot_cont_1000_p_scaffold_824
37645 bp | 10.19 x | 55.46% |
0.896215 |
unknown
23.08%
|
unknown
73.08%
|
unknown
61.54%
|
unknown
46.15%
|
Verrucomicrobia
34.62%
|
Bacteria
76.92%
|
SCNpilot_cont_1000_p_scaffold_2148
37210 bp | 9.19 x | 56.32% |
0.929024 |
unknown
45.00%
|
unknown
75.00%
|
unknown
62.50%
|
unknown
55.00%
|
unknown
45.00%
|
Bacteria
55.00%
|
SCNpilot_cont_1000_p_scaffold_872
35034 bp | 8.60 x | 58.86% |
0.868128 |
unknown
27.78%
|
unknown
61.11%
|
unknown
66.67%
|
unknown
33.33%
|
Verrucomicrobia
47.22%
|
Bacteria
69.44%
|
SCNpilot_cont_1000_p_scaffold_877
34846 bp | 7.56 x | 62.55% |
0.963554 |
Chthoniobacter fl...
28.57%
|
unknown
42.86%
|
unknown
67.86%
|
unknown
32.14%
|
Verrucomicrobia
53.57%
|
Bacteria
85.71%
|
SCNpilot_cont_1000_p_scaffold_883
34776 bp | 7.73 x | 58.39% |
0.97205 |
unknown
20.00%
|
unknown
46.67%
|
unknown
43.33%
|
unknown
36.67%
|
unknown
20.00%
|
Bacteria
80.00%
|
SCNpilot_cont_1000_p_scaffold_1277
34771 bp | 8.33 x | 58.80% |
0.931293 |
Opitutaceae bacte...
18.75%
|
unknown
56.25%
|
unknown
46.88%
|
unknown
28.13%
|
Verrucomicrobia
43.75%
|
Bacteria
81.25%
|
SCNpilot_cont_1000_p_scaffold_943
34765 bp | 8.73 x | 61.39% |
0.878815 |
Chthoniobacter fl...
21.05%
|
unknown
44.74%
|
unknown
60.53%
|
unknown
26.32%
|
Verrucomicrobia
52.63%
|
Bacteria
84.21%
|
SCNpilot_cont_1000_p_scaffold_889
34636 bp | 7.39 x | 56.99% |
0.905128 |
unknown
60.00%
|
unknown
72.50%
|
unknown
75.00%
|
unknown
70.00%
|
unknown
60.00%
|
unknown
60.00%
|
SCNpilot_cont_1000_p_scaffold_2690
33508 bp | 8.71 x | 58.36% |
0.832458 |
unknown
32.35%
|
unknown
58.82%
|
unknown
76.47%
|
unknown
41.18%
|
Verrucomicrobia
38.24%
|
Bacteria
64.71%
|
SCNpilot_cont_1000_p_scaffold_3694
32168 bp | 9.19 x | 58.48% |
0.851281 |
unknown
29.27%
|
unknown
65.85%
|
unknown
68.29%
|
unknown
56.10%
|
Verrucomicrobia
31.71%
|
Bacteria
68.29%
|
SCNpilot_cont_1000_p_scaffold_963
32165 bp | 7.90 x | 61.88% |
0.936608 |
RHI_Verrucumicrob...
32.26%
|
unknown
58.06%
|
unknown
77.42%
|
Verrucomicrobiae
35.48%
|
Verrucomicrobia
64.52%
|
Bacteria
87.10%
|
SCNpilot_cont_1000_p_scaffold_990
31578 bp | 9.44 x | 62.37% |
0.924283 |
unknown
22.58%
|
unknown
61.29%
|
unknown
58.06%
|
unknown
29.03%
|
Verrucomicrobia
45.16%
|
Bacteria
77.42%
|
SCNpilot_cont_1000_p_scaffold_1006
31133 bp | 8.01 x | 57.80% |
0.902419 |
unknown
28.13%
|
unknown
53.13%
|
unknown
56.25%
|
unknown
43.75%
|
Proteobacteria
28.13%
|
Bacteria
71.88%
|
SCNpilot_cont_1000_p_scaffold_1017
30897 bp | 10.31 x | 60.32% |
0.944461 |
unknown
29.17%
|
unknown
54.17%
|
unknown
62.50%
|
unknown
37.50%
|
unknown
29.17%
|
Bacteria
66.67%
|
SCNpilot_cont_1000_p_scaffold_1037
30473 bp | 10.13 x | 56.71% |
0.913497 |
unknown
30.00%
|
unknown
70.00%
|
unknown
65.00%
|
unknown
45.00%
|
Verrucomicrobia
35.00%
|
Bacteria
70.00%
|
SCNpilot_cont_1000_p_scaffold_1046
30127 bp | 7.87 x | 61.40% |
0.922196 |
RHI_Verrucumicrob...
19.35%
|
unknown
48.39%
|
unknown
61.29%
|
unknown
25.81%
|
Verrucomicrobia
41.94%
|
Bacteria
87.10%
|
SCNpilot_cont_1000_p_scaffold_1795
29443 bp | 9.93 x | 58.47% |
0.942703 |
Chthoniobacter fl...
40.91%
|
unknown
50.00%
|
unknown
54.55%
|
Spartobacteria
40.91%
|
Verrucomicrobia
77.27%
|
Bacteria
90.91%
|
SCNpilot_cont_1000_p_scaffold_1078
29324 bp | 7.84 x | 63.25% |
0.974355 |
Chthoniobacter fl...
37.04%
|
Chthoniobacter
37.04%
|
unknown
66.67%
|
Spartobacteria
37.04%
|
Verrucomicrobia
70.37%
|
Bacteria
96.30%
|
SCNpilot_cont_1000_p_scaffold_1799
28878 bp | 8.41 x | 62.13% |
0.944941 |
Opitutaceae bacte...
25.00%
|
unknown
45.83%
|
unknown
33.33%
|
Opitutae
29.17%
|
Verrucomicrobia
58.33%
|
Bacteria
87.50%
|
SCNpilot_cont_1000_p_scaffold_1094
28872 bp | 9.21 x | 61.72% |
0.931629 |
Opitutaceae bacte...
18.52%
|
unknown
51.85%
|
unknown
37.04%
|
Opitutae
25.93%
|
Verrucomicrobia
48.15%
|
Bacteria
88.89%
|
SCNpilot_cont_1000_p_scaffold_1135
27850 bp | 8.71 x | 55.77% |
0.926607 |
unknown
25.93%
|
unknown
77.78%
|
unknown
55.56%
|
unknown
51.85%
|
Verrucomicrobia
33.33%
|
Bacteria
74.07%
|
SCNpilot_cont_1000_p_scaffold_1139
27776 bp | 8.80 x | 60.34% |
0.929507 |
Chthoniobacter fl...
23.53%
|
unknown
52.94%
|
unknown
70.59%
|
unknown
47.06%
|
Verrucomicrobia
35.29%
|
Bacteria
82.35%
|
SCNpilot_cont_1000_p_scaffold_1146
27646 bp | 8.83 x | 54.92% |
0.927801 |
unknown
30.43%
|
unknown
69.57%
|
unknown
56.52%
|
unknown
56.52%
|
Verrucomicrobia
39.13%
|
Bacteria
69.57%
|
SCNpilot_cont_1000_p_scaffold_1147
27608 bp | 8.70 x | 62.76% |
0.910606 |
unknown
17.24%
|
unknown
41.38%
|
unknown
34.48%
|
Alphaproteobacteria
24.14%
|
Proteobacteria
44.83%
|
Bacteria
82.76%
|
SCNpilot_cont_1000_p_scaffold_1167
27140 bp | 9.45 x | 61.96% |
0.932719 |
Chthoniobacter fl...
22.73%
|
unknown
63.64%
|
unknown
54.55%
|
Opitutae
36.36%
|
Verrucomicrobia
68.18%
|
Bacteria
95.45%
|
SCNpilot_cont_1000_p_scaffold_1176
26957 bp | 9.92 x | 59.76% |
0.893089 |
Opitutaceae bacte...
38.10%
|
unknown
85.71%
|
unknown
52.38%
|
Opitutae
42.86%
|
Verrucomicrobia
57.14%
|
Bacteria
71.43%
|
SCNpilot_cont_1000_p_scaffold_1731
26524 bp | 6.91 x | 61.85% |
0.94669 |
Chthoniobacter fl...
34.78%
|
Chthoniobacter
34.78%
|
unknown
47.83%
|
Spartobacteria
34.78%
|
Verrucomicrobia
52.17%
|
Bacteria
95.65%
|
SCNpilot_cont_1000_p_scaffold_1236
25870 bp | 7.97 x | 61.62% |
0.923541 |
Chthoniobacter fl...
38.89%
|
Chthoniobacter
38.89%
|
unknown
61.11%
|
Spartobacteria
38.89%
|
Verrucomicrobia
66.67%
|
Bacteria
100.00%
|
SCNpilot_cont_1000_p_scaffold_1240
25810 bp | 8.49 x | 55.78% |
0.924642 |
unknown
45.00%
|
unknown
75.00%
|
unknown
60.00%
|
unknown
50.00%
|
Verrucomicrobia
45.00%
|
Bacteria
55.00%
|
SCNpilot_cont_1000_p_scaffold_1557
25660 bp | 9.34 x | 61.75% |
0.900935 |
unknown
29.03%
|
unknown
74.19%
|
unknown
80.65%
|
unknown
41.94%
|
Verrucomicrobia
45.16%
|
Bacteria
67.74%
|
SCNpilot_cont_1000_p_scaffold_1259
25486 bp | 8.09 x | 61.70% |
0.96912 |
Chthoniobacter fl...
36.00%
|
unknown
40.00%
|
unknown
72.00%
|
Spartobacteria
36.00%
|
Verrucomicrobia
68.00%
|
Bacteria
88.00%
|
SCNpilot_cont_1000_p_scaffold_1292
24780 bp | 10.19 x | 63.25% |
0.946489 |
Opitutaceae bacte...
33.33%
|
unknown
66.67%
|
Opitutales
42.86%
|
Opitutae
42.86%
|
Verrucomicrobia
42.86%
|
Bacteria
90.48%
|
SCNpilot_cont_1000_p_scaffold_1295
24749 bp | 7.77 x | 63.34% |
0.948402 |
unknown
25.00%
|
unknown
55.00%
|
unknown
75.00%
|
unknown
40.00%
|
Verrucomicrobia
40.00%
|
Bacteria
70.00%
|