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SCNpilot_BF_INOC_Rhodanobacter_69_30

SCNPILOT_CONT_500_BF_Rhodanobacter_68_1701
In projects: SCNPILOT_CONT_500_BF

Consensus taxonomy: Rhodanobacter  →  Xanthomonadales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 1-50 of 73 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_2422
Class: Gammaproteobacteria (60%)
20 13858 bp 61.62 3969.22 87.68
SCNpilot_cont_500_bf_scaffold_34253
Species: Rhodanobacter fulvus (100%)
1 1774 bp 73.68 2176.72 99.94
SCNpilot_cont_500_bf_scaffold_3984
Species: Rhodanobacter fulvus (87.5%)
8 9141 bp 71.66 1928.40 91.57
SCNpilot_cont_500_bf_scaffold_893
Genus: Rhodanobacter (69.7%)
33 42972 bp 71.03 1928.27 90.48
SCNpilot_cont_500_bf_scaffold_787
Genus: Rhodanobacter (67.5%)
40 51931 bp 70.20 1907.24 88.79
SCNpilot_cont_500_bf_scaffold_14677
Species: RIFOXYA1_FULL_Rhodanobacter_67_6_curated (100%)
2 3357 bp 72.59 1865.95 95.35
SCNpilot_cont_500_bf_scaffold_600
Genus: Rhodanobacter (66.67%)
45 58178 bp 69.97 1850.54 92.18
SCNpilot_cont_500_bf_scaffold_516
Genus: Rhodanobacter (74.36%)
39 52540 bp 70.33 1843.97 90.29
SCNpilot_cont_500_bf_scaffold_758
Order: Xanthomonadales (83.7%)
92 106420 bp 69.84 1832.39 91.32
SCNpilot_cont_500_bf_scaffold_2719
Genus: Rhodanobacter (74.36%)
39 38833 bp 70.33 1829.64 92.08
SCNpilot_cont_500_bf_scaffold_871
Genus: Rhodanobacter (66.67%)
60 65789 bp 70.52 1826.82 91.35
SCNpilot_cont_500_bf_scaffold_1823
Genus: Rhodanobacter (66.67%)
15 17463 bp 70.66 1818.47 93.45
SCNpilot_cont_500_bf_scaffold_387
Genus: Rhodanobacter (59.42%)
69 87395 bp 69.92 1817.62 91.56
SCNpilot_cont_500_bf_scaffold_1008
Genus: Rhodanobacter (67.11%)
76 85697 bp 68.48 1816.11 87.92
SCNpilot_cont_500_bf_scaffold_4253
Genus: Dyella (50%)
10 19562 bp 69.56 1799.13 94.71
SCNpilot_cont_500_bf_scaffold_634
Genus: Rhodanobacter (59.56%)
136 156945 bp 69.25 1797.11 91.00
SCNpilot_cont_500_bf_scaffold_592
Genus: Rhodanobacter (76.47%)
34 45112 bp 69.54 1791.58 92.03
SCNpilot_cont_500_bf_scaffold_6025
Genus: Rhodanobacter (57.14%)
14 14317 bp 68.94 1787.94 90.82
SCNpilot_cont_500_bf_scaffold_1298
Genus: Rhodanobacter (80%)
25 23013 bp 70.44 1784.08 88.75
SCNpilot_cont_500_bf_scaffold_372
Genus: Rhodanobacter (65.33%)
150 161882 bp 69.26 1777.78 90.29
SCNpilot_cont_500_bf_scaffold_1013
Genus: Rhodanobacter (76.47%)
34 27935 bp 69.31 1773.06 87.12
SCNpilot_cont_500_bf_scaffold_348
Genus: Rhodanobacter (56.9%)
116 131523 bp 69.26 1772.77 91.08
SCNpilot_cont_500_bf_scaffold_2570
Genus: Rhodanobacter (74.19%)
31 34646 bp 69.04 1771.62 88.69
SCNpilot_cont_500_bf_scaffold_781
Genus: Rhodanobacter (58.14%)
43 47862 bp 69.92 1770.83 90.22
SCNpilot_cont_500_bf_scaffold_1756
Genus: Rhodanobacter (93.33%)
45 41831 bp 69.68 1760.75 93.14
SCNpilot_cont_500_bf_scaffold_4726
Genus: Rhodanobacter (77.78%)
9 8018 bp 69.97 1755.05 93.91
SCNpilot_cont_500_bf_scaffold_2958
Order: Xanthomonadales (88.89%)
9 11819 bp 69.12 1749.66 92.14
SCNpilot_cont_500_bf_scaffold_1301
Genus: Rhodanobacter (62.96%)
54 58738 bp 69.32 1746.88 89.12
SCNpilot_cont_500_bf_scaffold_785
Genus: Rhodanobacter (76.92%)
39 38073 bp 69.78 1743.85 92.77
SCNpilot_cont_500_bf_scaffold_1492
Genus: Rhodanobacter (67.86%)
84 86574 bp 69.73 1737.41 88.29
SCNpilot_cont_500_bf_scaffold_15212
Species: Rhodanobacter spathiphylli (50%)
6 5103 bp 68.41 1733.05 80.95
SCNpilot_cont_500_bf_scaffold_1399
Order: Xanthomonadales (75.68%)
37 34175 bp 69.41 1732.73 90.59
SCNpilot_cont_500_bf_scaffold_2790
Genus: Rhodanobacter (62.5%)
16 12396 bp 70.97 1726.22 94.22
SCNpilot_cont_500_bf_scaffold_717
Genus: Rhodanobacter (73.68%)
38 37654 bp 68.59 1719.26 92.60
SCNpilot_cont_500_bf_scaffold_723
Genus: Rhodanobacter (53.57%)
56 57198 bp 69.68 1710.52 93.52
SCNpilot_cont_500_bf_scaffold_3418
Genus: Rhodanobacter (75%)
12 10423 bp 69.20 1708.84 90.15
SCNpilot_cont_500_bf_scaffold_2733
Order: Xanthomonadales (100%)
13 12575 bp 69.73 1708.59 91.37
SCNpilot_cont_500_bf_scaffold_597
Genus: Rhodanobacter (65.12%)
43 43890 bp 68.83 1706.20 91.42
SCNpilot_cont_500_bf_scaffold_1517
Genus: Rhodanobacter (62.5%)
32 30480 bp 68.59 1702.15 91.08
SCNpilot_cont_500_bf_scaffold_1915
Order: Xanthomonadales (55.56%)
18 16731 bp 67.28 1696.28 94.51
SCNpilot_cont_500_bf_scaffold_2423
Order: Xanthomonadales (82.76%)
29 37144 bp 68.63 1695.48 86.65
SCNpilot_cont_500_bf_scaffold_3349
Genus: Rhodanobacter (80%)
10 16422 bp 68.20 1687.23 87.87
SCNpilot_cont_500_bf_scaffold_692
Genus: Rhodanobacter (72.22%)
54 66000 bp 69.25 1682.83 87.84
SCNpilot_cont_500_bf_scaffold_677
Genus: Rhodanobacter (50.79%)
63 68665 bp 69.15 1680.19 90.16
SCNpilot_cont_500_bf_scaffold_410
Order: Xanthomonadales (52.94%)
68 89558 bp 68.87 1676.46 91.27
SCNpilot_cont_500_bf_scaffold_564
Order: Xanthomonadales (58.33%)
48 54130 bp 67.99 1674.75 89.69
SCNpilot_cont_500_bf_scaffold_654
Genus: Rhodanobacter (62.22%)
270 281952 bp 68.31 1674.10 88.04
SCNpilot_cont_500_bf_scaffold_1633
Genus: Rhodanobacter (71.05%)
38 39740 bp 68.65 1671.53 87.06
SCNpilot_cont_500_bf_scaffold_475
Genus: Rhodanobacter (57.75%)
187 190585 bp 68.54 1665.43 91.30
SCNpilot_cont_500_bf_scaffold_2147
Genus: Rhodanobacter (65%)
20 20388 bp 69.39 1660.16 91.95
Displaying items 1-50 of 73 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.