Consensus taxonomy: Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria
contig | # features | sequence size | GC content (%) | Cov | Coding Density (%) | |
---|---|---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_11016_curated
Species:
Shinella sp. DD12 (100%)
|
10 | 8193 bp | 64.75 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_9445_curated
Species:
Shinella sp. DD12 (55.56%)
|
10 | 6808 bp | 59.09 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_12180_curated
Species:
Shinella sp. DD12 (90%)
|
10 | 6945 bp | 61.50 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_19593_curated
Order:
Rhizobiales (66.67%)
|
9 | 8280 bp | 61.62 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_14201_curated | 9 | 5175 bp | 65.82 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_13476_curated
Species:
Shinella sp. DD12 (55.56%)
|
9 | 6746 bp | 62.20 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_17579_curated
Species:
Shinella sp. DD12 (66.67%)
|
9 | 7849 bp | 62.57 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_8356_curated
Order:
Sphingomonadales (77.78%)
|
9 | 10381 bp | 55.91 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_15892_curated
Species:
Shinella sp. DD12 (88.89%)
|
9 | 6090 bp | 60.51 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_11541_curated
Species:
Shinella sp. DD12 (100%)
|
9 | 7057 bp | 65.91 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_8304_curated
Species:
Shinella sp. DD12 (77.78%)
|
9 | 9500 bp | 63.61 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_7820_curated
Species:
Shinella sp. DD12 (77.78%)
|
9 | 9340 bp | 62.38 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_11567_curated
Species:
Shinella sp. DD12 (77.78%)
|
9 | 6924 bp | 62.46 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_10228_curated
Species:
Shinella sp. DD12 (55.56%)
|
9 | 5746 bp | 63.30 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_14235_curated
Species:
Rhizobium leguminosarum (55.56%)
|
9 | 7458 bp | 64.13 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_3827_curated
Species:
Shinella sp. DD12 (77.78%)
|
9 | 8954 bp | 69.06 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_9913_curated
Order:
Rhizobiales (55.56%)
|
9 | 10794 bp | 63.61 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_5681_curated
Species:
Shinella sp. DD12 (100%)
|
9 | 7044 bp | 64.52 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_7912_curated
Order:
Rhizobiales (55.56%)
|
9 | 7074 bp | 55.75 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_4928_curated
Species:
Shinella sp. DD12 (77.78%)
|
9 | 9042 bp | 64.29 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_15094_curated
Species:
Shinella sp. DD12 (77.78%)
|
9 | 5464 bp | 63.18 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_14324_curated
Order:
Rhizobiales (77.78%)
|
9 | 7763 bp | 63.45 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_8066_curated
Species:
Shinella sp. DD12 (88.89%)
|
9 | 10242 bp | 66.52 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_3406_curated
Order:
Rhizobiales (100%)
|
9 | 8362 bp | 66.38 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_2746_curated
Species:
Shinella sp. DD12 (77.78%)
|
9 | 9808 bp | 66.51 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_9484_curated
Species:
Shinella sp. DD12 (100%)
|
9 | 7317 bp | 66.19 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_5338_curated
Species:
Agrobacterium tumefaciens (77.78%)
|
9 | 7053 bp | 66.44 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_5218_curated
Order:
Rhizobiales (77.78%)
|
9 | 7940 bp | 59.32 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_5406_curated
Species:
Shinella sp. DD12 (88.89%)
|
9 | 7602 bp | 63.59 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_9839_curated
Order:
Rhizobiales (55.56%)
|
9 | 5502 bp | 60.87 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_8110_curated
Species:
Shinella sp. DD12 (77.78%)
|
9 | 7601 bp | 62.39 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_11271_curated
Species:
Shinella sp. DD12 (77.78%)
|
9 | 6220 bp | 63.33 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_5456_curated
Species:
Ponticoccus sp. UMTAT08 (55.56%)
|
9 | 8941 bp | 61.34 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_17105_curated
Species:
Shinella sp. DD12 (55.56%)
|
9 | 8387 bp | 62.64 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_10460_curated
Species:
Shinella sp. DD12 (77.78%)
|
9 | 7101 bp | 62.36 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_17545_curated
Order:
Rhizobiales (88.89%)
|
9 | 6014 bp | 61.62 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_8631_curated
Genus:
Novosphingobium (50%)
|
8 | 6718 bp | 65.75 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_4336_curated
Genus:
Hoeflea (62.5%)
|
8 | 6753 bp | 64.16 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_15911_curated
Species:
Shinella sp. DD12 (75%)
|
8 | 5395 bp | 62.61 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_13353_curated
Species:
Shinella sp. DD12 (75%)
|
8 | 10010 bp | 62.69 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_8355_curated
Species:
Ensifer adhaerens (50%)
|
8 | 7314 bp | 68.10 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_9695_curated
Species:
Shinella sp. DD12 (87.5%)
|
8 | 8146 bp | 65.68 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_9459_curated
Species:
Shinella sp. DD12 (50%)
|
8 | 6242 bp | 61.76 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_15733_curated
Species:
Shinella sp. DD12 (50%)
|
8 | 5084 bp | 59.13 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_13651_curated
Species:
Shinella sp. DD12 (75%)
|
8 | 7115 bp | 66.04 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_4263_curated
Species:
Shinella sp. DD12 (100%)
|
8 | 7396 bp | 65.54 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_2833_curated
Species:
Shinella sp. DD12 (87.5%)
|
8 | 10478 bp | 68.70 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_12612_curated
Species:
Shinella sp. DD12 (87.5%)
|
8 | 5536 bp | 68.82 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_15896_curated
Class:
Alphaproteobacteria (50%)
|
8 | 6801 bp | 58.30 | 1.00 | 0.00 | |
SCNpilot_expt_1000_bf_scaffold_11319_curated
Species:
Shinella sp. DD12 (75%)
|
8 | 6970 bp | 60.90 | 1.00 | 0.00 |