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2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

Consensus taxonomy: Verrucomicrobia  →  Bacteria

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Min-Max Range: 54.65 - 61.07


Min-Max Range: 27.16 - 31.24


Upper-bound value

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Displaying items 1-50 of 53 in total
Contig (seq size) Coding Density (%) Species Genus Order Class Phylum Domain
berkeley_reactor_200306_planktonic_scaffold_220752
449452 bp | 29.52 x | 58.47%
0.894238
Pedosphaera parvula
46.65%
Pedosphaera
46.65%
Verrucomicrobiales
46.92%
Verrucomicrobiae
48.26%
Verrucomicrobia
59.79%
Bacteria
88.47%
berkeley_reactor_200306_planktonic_scaffold_23420
390287 bp | 30.32 x | 57.58%
0.893617
Pedosphaera parvula
44.06%
Pedosphaera
44.06%
Verrucomicrobiales
44.35%
Verrucomicrobiae
45.51%
Verrucomicrobia
59.71%
Bacteria
84.93%
berkeley_reactor_200306_planktonic_scaffold_198771
374061 bp | 29.08 x | 56.80%
0.864161
Pedosphaera parvula
33.00%
unknown
41.75%
unknown
37.04%
Verrucomicrobiae
34.68%
Verrucomicrobia
50.17%
Bacteria
77.78%
berkeley_reactor_200306_planktonic_scaffold_78559
361742 bp | 29.94 x | 59.02%
0.903486
Pedosphaera parvula
45.25%
Pedosphaera
45.25%
Verrucomicrobiales
45.57%
Verrucomicrobiae
46.84%
Verrucomicrobia
55.06%
Bacteria
85.13%
berkeley_reactor_200306_planktonic_scaffold_158606
258015 bp | 29.07 x | 56.88%
0.904277
unknown
19.50%
unknown
44.00%
unknown
44.50%
unknown
35.50%
Verrucomicrobia
36.00%
Bacteria
78.50%
berkeley_reactor_200306_planktonic_scaffold_30796
217495 bp | 28.50 x | 59.09%
0.909731
Pedosphaera parvula
28.29%
unknown
39.47%
unknown
42.11%
Verrucomicrobiae
32.89%
Verrucomicrobia
49.34%
Bacteria
89.47%
berkeley_reactor_200306_planktonic_scaffold_58787
203264 bp | 29.85 x | 57.57%
0.90199
Pedosphaera parvula
22.88%
unknown
33.99%
unknown
35.29%
unknown
26.80%
Verrucomicrobia
38.56%
Bacteria
86.27%
berkeley_reactor_200306_planktonic_scaffold_295472
192065 bp | 29.77 x | 58.94%
0.88369
Pedosphaera parvula
51.79%
Pedosphaera
51.79%
Verrucomicrobiales
52.38%
Verrucomicrobiae
55.36%
Verrucomicrobia
63.10%
Bacteria
88.10%
berkeley_reactor_200306_planktonic_scaffold_89890
182961 bp | 30.72 x | 55.90%
0.884576
Pedosphaera parvula
25.00%
unknown
46.53%
unknown
40.28%
unknown
35.42%
Verrucomicrobia
37.50%
Bacteria
82.64%
berkeley_reactor_200306_planktonic_scaffold_253396
170076 bp | 30.18 x | 57.22%
0.8809
Pedosphaera parvula
37.75%
unknown
39.07%
unknown
43.05%
Verrucomicrobiae
38.41%
Verrucomicrobia
48.34%
Bacteria
84.77%
berkeley_reactor_200306_planktonic_scaffold_226867
165555 bp | 28.42 x | 58.50%
0.907584
Pedosphaera parvula
34.86%
Pedosphaera
34.86%
Verrucomicrobiales
35.78%
Verrucomicrobiae
35.78%
Verrucomicrobia
48.62%
Bacteria
88.99%
berkeley_reactor_200306_planktonic_scaffold_310897
159464 bp | 28.80 x | 59.09%
0.913611
Pedosphaera parvula
51.72%
Pedosphaera
51.72%
Verrucomicrobiales
51.72%
Verrucomicrobiae
53.45%
Verrucomicrobia
59.48%
Bacteria
89.66%
berkeley_reactor_200306_planktonic_scaffold_228973
147044 bp | 29.08 x | 58.70%
0.904042
Pedosphaera parvula
48.72%
Pedosphaera
48.72%
Verrucomicrobiales
51.28%
Verrucomicrobiae
52.99%
Verrucomicrobia
62.39%
Bacteria
89.74%
berkeley_reactor_200306_planktonic_scaffold_21569
143036 bp | 29.81 x | 58.02%
0.910379
Pedosphaera parvula
64.84%
Pedosphaera
64.84%
Verrucomicrobiales
67.19%
Verrucomicrobiae
67.97%
Verrucomicrobia
75.78%
Bacteria
85.94%
berkeley_reactor_200306_planktonic_scaffold_310271
130417 bp | 31.11 x | 54.65%
0.848586
unknown
25.71%
unknown
53.33%
unknown
52.38%
unknown
42.86%
Verrucomicrobia
34.29%
Bacteria
68.57%
berkeley_reactor_200306_planktonic_scaffold_80596
125668 bp | 28.99 x | 59.88%
0.923696
Pedosphaera parvula
27.66%
unknown
37.23%
unknown
37.23%
Verrucomicrobiae
32.98%
Verrucomicrobia
59.57%
Bacteria
88.30%
berkeley_reactor_200306_planktonic_scaffold_204825
120856 bp | 29.58 x | 59.22%
0.915743
Pedosphaera parvula
39.42%
Pedosphaera
39.42%
Verrucomicrobiales
39.42%
Verrucomicrobiae
40.38%
Verrucomicrobia
50.00%
Bacteria
87.50%
berkeley_reactor_200306_planktonic_scaffold_208745
116928 bp | 29.45 x | 59.41%
0.910834
Pedosphaera parvula
23.66%
unknown
39.78%
unknown
33.33%
Verrucomicrobiae
26.88%
Verrucomicrobia
55.91%
Bacteria
87.10%
berkeley_reactor_200306_planktonic_scaffold_161060
113134 bp | 29.22 x | 58.14%
0.88998
Pedosphaera parvula
50.00%
Pedosphaera
50.00%
Verrucomicrobiales
51.09%
Verrucomicrobiae
52.17%
Verrucomicrobia
59.78%
Bacteria
82.61%
berkeley_reactor_200306_planktonic_scaffold_255293
105215 bp | 31.18 x | 58.56%
0.898779
Pedosphaera parvula
48.39%
Pedosphaera
48.39%
Verrucomicrobiales
49.46%
Verrucomicrobiae
50.54%
Verrucomicrobia
61.29%
Bacteria
90.32%
berkeley_reactor_200306_planktonic_scaffold_190120
103792 bp | 31.09 x | 60.45%
0.917787
Pedosphaera parvula
50.68%
Pedosphaera
50.68%
Verrucomicrobiales
50.68%
Verrucomicrobiae
52.05%
Verrucomicrobia
60.27%
Bacteria
90.41%
berkeley_reactor_200306_planktonic_scaffold_84741
97435 bp | 29.47 x | 57.64%
0.901493
Pedosphaera parvula
32.94%
unknown
47.06%
unknown
43.53%
unknown
36.47%
Verrucomicrobia
40.00%
Bacteria
67.06%
berkeley_reactor_200306_planktonic_scaffold_162563
95129 bp | 30.07 x | 59.60%
0.904645
Pedosphaera parvula
36.36%
unknown
37.66%
unknown
40.26%
Verrucomicrobiae
36.36%
Verrucomicrobia
53.25%
Bacteria
90.91%
berkeley_reactor_200306_planktonic_scaffold_278072
90250 bp | 31.24 x | 59.43%
0.913418
Pedosphaera parvula
44.44%
Pedosphaera
44.44%
Verrucomicrobiales
45.83%
Verrucomicrobiae
47.22%
Verrucomicrobia
58.33%
Bacteria
87.50%
berkeley_reactor_200306_planktonic_scaffold_64763
89393 bp | 28.25 x | 57.16%
0.889275
unknown
19.64%
unknown
53.57%
unknown
58.93%
unknown
42.86%
Verrucomicrobia
32.14%
Bacteria
76.79%
berkeley_reactor_200306_planktonic_scaffold_66144
84825 bp | 28.87 x | 59.08%
0.917701
Pedosphaera parvula
22.64%
unknown
45.28%
unknown
45.28%
unknown
33.96%
Verrucomicrobia
33.96%
Bacteria
84.91%
berkeley_reactor_200306_planktonic_scaffold_269654
81556 bp | 29.60 x | 59.21%
0.902546
Pedosphaera parvula
48.44%
Pedosphaera
48.44%
Verrucomicrobiales
48.44%
Verrucomicrobiae
48.44%
Verrucomicrobia
57.81%
Bacteria
82.81%
berkeley_reactor_200306_planktonic_scaffold_24546
80000 bp | 28.90 x | 60.03%
0.918375
Pedosphaera parvula
35.00%
Pedosphaera
35.00%
Verrucomicrobiales
35.00%
Verrucomicrobiae
35.00%
Verrucomicrobia
40.00%
Bacteria
92.50%
berkeley_reactor_200306_planktonic_scaffold_146695
76618 bp | 28.84 x | 58.21%
0.90715
Pedosphaera parvula
41.79%
unknown
43.28%
Verrucomicrobiales
47.76%
Verrucomicrobiae
52.24%
Verrucomicrobia
61.19%
Bacteria
91.04%
berkeley_reactor_200306_planktonic_scaffold_311853
75558 bp | 31.09 x | 57.42%
0.866857
Pedosphaera parvula
30.77%
unknown
43.08%
unknown
44.62%
unknown
41.54%
Verrucomicrobia
40.00%
Bacteria
75.38%
berkeley_reactor_200306_planktonic_scaffold_37596
69603 bp | 30.88 x | 59.38%
0.88581
Pedosphaera parvula
45.61%
Pedosphaera
45.61%
Verrucomicrobiales
45.61%
Verrucomicrobiae
49.12%
Verrucomicrobia
56.14%
Bacteria
87.72%
berkeley_reactor_200306_planktonic_scaffold_308111
57568 bp | 30.73 x | 60.31%
0.895654
Pedosphaera parvula
30.61%
unknown
48.98%
unknown
46.94%
unknown
38.78%
Verrucomicrobia
48.98%
Bacteria
81.63%
berkeley_reactor_200306_planktonic_scaffold_41967
55773 bp | 29.00 x | 58.99%
0.888064
Pedosphaera parvula
36.96%
Pedosphaera
36.96%
unknown
39.13%
Verrucomicrobiae
36.96%
Verrucomicrobia
52.17%
Bacteria
89.13%
berkeley_reactor_200306_planktonic_scaffold_302219
55143 bp | 30.57 x | 59.92%
0.892425
Pedosphaera parvula
36.17%
unknown
38.30%
Verrucomicrobiales
36.17%
Verrucomicrobiae
36.17%
Verrucomicrobia
53.19%
Bacteria
89.36%
berkeley_reactor_200306_planktonic_scaffold_207894
44733 bp | 30.26 x | 59.20%
0.867078
Pedosphaera parvula
50.00%
Pedosphaera
50.00%
Verrucomicrobiales
50.00%
Verrucomicrobiae
52.08%
Verrucomicrobia
58.33%
Bacteria
89.58%
berkeley_reactor_200306_planktonic_scaffold_128857
40858 bp | 28.82 x | 58.86%
0.880072
Pedosphaera parvula
60.00%
Pedosphaera
60.00%
Verrucomicrobiales
60.00%
Verrucomicrobiae
62.86%
Verrucomicrobia
68.57%
Bacteria
88.57%
berkeley_reactor_200306_planktonic_scaffold_112900
37953 bp | 29.94 x | 60.05%
0.915106
Pedosphaera parvula
67.65%
Pedosphaera
67.65%
Verrucomicrobiales
67.65%
Verrucomicrobiae
67.65%
Verrucomicrobia
67.65%
Bacteria
88.24%
berkeley_reactor_200306_planktonic_scaffold_68971
30680 bp | 28.38 x | 57.98%
0.911147
Verrucomicrobia b...
10.00%
unknown
50.00%
unknown
55.00%
unknown
40.00%
Verrucomicrobia
25.00%
Bacteria
90.00%
berkeley_reactor_200306_planktonic_scaffold_12886
28619 bp | 30.29 x | 59.11%
0.899542
Pedosphaera parvula
68.18%
Pedosphaera
68.18%
Verrucomicrobiales
68.18%
Verrucomicrobiae
68.18%
Verrucomicrobia
77.27%
Bacteria
90.91%
berkeley_reactor_200306_planktonic_scaffold_49371
27639 bp | 28.71 x | 57.05%
0.837621
Pedosphaera parvula
28.57%
Pedosphaera
28.57%
Verrucomicrobiales
28.57%
Verrucomicrobiae
28.57%
Verrucomicrobia
35.71%
Bacteria
85.71%
berkeley_reactor_200306_planktonic_scaffold_220416
20596 bp | 27.34 x | 58.94%
0.911099
unknown
17.65%
unknown
52.94%
unknown
47.06%
unknown
29.41%
Bacteroidetes
23.53%
Bacteria
82.35%
berkeley_reactor_200306_planktonic_scaffold_235821
18762 bp | 28.42 x | 60.02%
0.956348
unknown
30.00%
unknown
30.00%
unknown
40.00%
unknown
30.00%
Verrucomicrobia
30.00%
Bacteria
70.00%
berkeley_reactor_200306_planktonic_scaffold_114424
14047 bp | 27.80 x | 60.46%
0.869865
Pedosphaera parvula
36.36%
unknown
45.45%
unknown
45.45%
Verrucomicrobiae
36.36%
Verrucomicrobia
63.64%
Bacteria
90.91%
berkeley_reactor_200306_planktonic_scaffold_328212
6396 bp | 30.39 x | 55.33%
0.873827
unknown
50.00%
unknown
50.00%
unknown
50.00%
unknown
62.50%
Cyanobacteria
50.00%
Bacteria
50.00%
berkeley_reactor_200306_planktonic_scaffold_61587
4494 bp | 27.50 x | 56.88%
0.568091
Bradyrhizobium sp...
50.00%
Bradyrhizobium
50.00%
Rhizobiales
50.00%
Alphaproteobacteria
50.00%
Proteobacteria
50.00%
Bacteria
100.00%
berkeley_reactor_200306_planktonic_scaffold_201738
3395 bp | 30.80 x | 61.00%
0.898675
Pedosphaera parvula
50.00%
Pedosphaera
50.00%
Verrucomicrobiales
50.00%
Verrucomicrobiae
50.00%
Verrucomicrobia
50.00%
Bacteria
50.00%
berkeley_reactor_200306_planktonic_scaffold_113325
1686 bp | 28.83 x | 56.64%
0.690391
Sphingomonas witt...
50.00%
Sphingomonas
100.00%
Sphingomonadales
100.00%
Alphaproteobacteria
100.00%
Proteobacteria
100.00%
Bacteria
100.00%
berkeley_reactor_200306_planktonic_scaffold_239269
1607 bp | 30.90 x | 59.61%
0.845675
Marichromatium pu...
33.33%
Marichromatium
33.33%
Chromatiales
33.33%
Gammaproteobacteria
33.33%
Proteobacteria
33.33%
Bacteria
66.67%
berkeley_reactor_200306_planktonic_scaffold_69426
1364 bp | 27.16 x | 61.07%
0.998534
Afipia felis
100.00%
Afipia
100.00%
Rhizobiales
100.00%
Alphaproteobacteria
100.00%
Proteobacteria
100.00%
Bacteria
100.00%
berkeley_reactor_200306_planktonic_scaffold_1208
1295 bp | 28.49 x | 59.38%
0.764479
RLO_Burkholderial...
100.00%
unknown
100.00%
Burkholderiales
100.00%
Betaproteobacteria
100.00%
Proteobacteria
100.00%
Bacteria
100.00%
Displaying items 1-50 of 53 in total